EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000000911 (Gene tree)
Gene ID: 111850604
Gene Symbol: smfn
Alias: -
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 4461 bases
Position: chrPGUA01000209.1:635521-639981
Accession: 111850604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000013516	RNase_T	PF00929.24	1.5e-33	1	1
ENSPKIP00000013503	RNase_T	PF00929.24	8.3e-28	1	1
ENSPKIP00000013536	RNase_T	PF00929.24	9.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000037927	-	1866	-	ENSPKIP00000013503	286 (aa)	-	-
ENSPKIT00000037940	-	1460	-	ENSPKIP00000013516	280 (aa)	XP_023680422	UPI000CD653D1
ENSPKIT00000037960	-	1611	-	ENSPKIP00000013536	193 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000000911's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000000911's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000000911	smfn	77	84.459	ENSG00000076043	REXO2	100	81.383	Homo_sapiens
ENSPKIG00000000911	smfn	77	84.459	ENSAMEG00000013263	REXO2	88	78.846	Ailuropoda_melanoleuca
ENSPKIG00000000911	smfn	77	88.514	ENSACIG00000023553	smfn	97	85.635	Amphilophus_citrinellus
ENSPKIG00000000911	smfn	62	68.800	ENSAOCG00000011565	smfn	96	70.886	Amphiprion_ocellaris
ENSPKIG00000000911	smfn	77	85.811	ENSAPEG00000012435	smfn	71	84.375	Amphiprion_percula
ENSPKIG00000000911	smfn	77	85.811	ENSATEG00000015385	smfn	77	75.926	Anabas_testudineus
ENSPKIG00000000911	smfn	77	84.459	ENSAPLG00000005045	REXO2	92	80.319	Anas_platyrhynchos
ENSPKIG00000000911	smfn	77	72.297	ENSACAG00000011631	REXO2	86	71.038	Anolis_carolinensis
ENSPKIG00000000911	smfn	77	85.135	ENSANAG00000020834	REXO2	85	81.683	Aotus_nancymaae
ENSPKIG00000000911	smfn	54	63.810	ENSANAG00000027457	-	95	63.309	Aotus_nancymaae
ENSPKIG00000000911	smfn	77	83.784	ENSACLG00000024566	smfn	97	80.541	Astatotilapia_calliptera
ENSPKIG00000000911	smfn	77	84.459	ENSBTAG00000005843	REXO2	88	78.846	Bos_taurus
ENSPKIG00000000911	smfn	92	40.678	WBGene00007429	C08B6.8	93	52.055	Caenorhabditis_elegans
ENSPKIG00000000911	smfn	77	85.135	ENSCJAG00000012434	REXO2	85	81.188	Callithrix_jacchus
ENSPKIG00000000911	smfn	77	83.108	ENSCAFG00000013511	REXO2	91	76.147	Canis_familiaris
ENSPKIG00000000911	smfn	77	84.459	ENSCAFG00020002513	REXO2	91	77.064	Canis_lupus_dingo
ENSPKIG00000000911	smfn	77	84.459	ENSCHIG00000009264	REXO2	88	78.846	Capra_hircus
ENSPKIG00000000911	smfn	77	73.649	ENSTSYG00000027948	-	99	71.503	Carlito_syrichta
ENSPKIG00000000911	smfn	77	85.135	ENSTSYG00000002237	REXO2	85	81.188	Carlito_syrichta
ENSPKIG00000000911	smfn	77	85.135	ENSCAPG00000006093	REXO2	97	83.516	Cavia_aperea
ENSPKIG00000000911	smfn	77	85.135	ENSCPOG00000010548	REXO2	85	81.683	Cavia_porcellus
ENSPKIG00000000911	smfn	77	84.459	ENSCCAG00000034979	REXO2	85	81.188	Cebus_capucinus
ENSPKIG00000000911	smfn	77	84.459	ENSCATG00000015278	REXO2	88	78.365	Cercocebus_atys
ENSPKIG00000000911	smfn	77	85.135	ENSCLAG00000011195	REXO2	86	81.683	Chinchilla_lanigera
ENSPKIG00000000911	smfn	77	84.459	ENSCSAG00000002754	REXO2	88	78.365	Chlorocebus_sabaeus
ENSPKIG00000000911	smfn	77	83.784	ENSCHOG00000000642	-	88	77.404	Choloepus_hoffmanni
ENSPKIG00000000911	smfn	54	80.000	ENSCPBG00000009359	REXO2	100	76.552	Chrysemys_picta_bellii
ENSPKIG00000000911	smfn	84	55.215	ENSCING00000009858	-	94	55.385	Ciona_intestinalis
ENSPKIG00000000911	smfn	77	84.459	ENSCANG00000034756	REXO2	88	78.365	Colobus_angolensis_palliatus
ENSPKIG00000000911	smfn	77	83.108	ENSCGRG00001013673	-	96	80.102	Cricetulus_griseus_chok1gshd
ENSPKIG00000000911	smfn	77	81.757	ENSCGRG00001010922	-	99	78.713	Cricetulus_griseus_chok1gshd
ENSPKIG00000000911	smfn	77	84.459	ENSCGRG00001019814	-	88	78.469	Cricetulus_griseus_chok1gshd
ENSPKIG00000000911	smfn	77	84.459	ENSCGRG00000006235	Rexo2	88	78.469	Cricetulus_griseus_crigri
ENSPKIG00000000911	smfn	77	87.838	ENSCSEG00000007214	smfn	73	80.288	Cynoglossus_semilaevis
ENSPKIG00000000911	smfn	77	80.405	ENSCVAG00000012008	smfn	100	77.297	Cyprinodon_variegatus
ENSPKIG00000000911	smfn	77	88.514	ENSDARG00000009806	smfn	79	80.676	Danio_rerio
ENSPKIG00000000911	smfn	77	85.135	ENSDNOG00000046533	REXO2	86	81.667	Dasypus_novemcinctus
ENSPKIG00000000911	smfn	77	62.838	ENSDORG00000025142	-	91	61.538	Dipodomys_ordii
ENSPKIG00000000911	smfn	77	85.135	ENSDORG00000011255	Rexo2	88	79.327	Dipodomys_ordii
ENSPKIG00000000911	smfn	77	52.027	FBgn0039115	CG10214	82	56.322	Drosophila_melanogaster
ENSPKIG00000000911	smfn	77	81.081	ENSEBUG00000013964	REXO2	64	75.532	Eptatretus_burgeri
ENSPKIG00000000911	smfn	77	84.459	ENSEASG00005006674	REXO2	91	76.959	Equus_asinus_asinus
ENSPKIG00000000911	smfn	77	84.459	ENSECAG00000005988	REXO2	91	76.959	Equus_caballus
ENSPKIG00000000911	smfn	77	90.541	ENSELUG00000020072	smfn	79	76.522	Esox_lucius
ENSPKIG00000000911	smfn	77	84.459	ENSFCAG00000018632	REXO2	88	78.846	Felis_catus
ENSPKIG00000000911	smfn	77	84.459	ENSFALG00000010044	REXO2	91	81.421	Ficedula_albicollis
ENSPKIG00000000911	smfn	77	85.135	ENSFDAG00000011764	REXO2	85	81.683	Fukomys_damarensis
ENSPKIG00000000911	smfn	77	91.216	ENSGMOG00000006370	smfn	99	84.817	Gadus_morhua
ENSPKIG00000000911	smfn	77	85.135	ENSGALG00000035980	REXO2	87	79.208	Gallus_gallus
ENSPKIG00000000911	smfn	96	65.568	ENSGAFG00000015349	smfn	96	65.568	Gambusia_affinis
ENSPKIG00000000911	smfn	77	82.432	ENSGACG00000020096	smfn	96	79.487	Gasterosteus_aculeatus
ENSPKIG00000000911	smfn	77	83.784	ENSGAGG00000021126	REXO2	94	73.611	Gopherus_agassizii
ENSPKIG00000000911	smfn	77	84.459	ENSGGOG00000023267	REXO2	88	78.365	Gorilla_gorilla
ENSPKIG00000000911	smfn	85	51.012	ENSHBUG00000020097	REXO2	95	51.012	Haplochromis_burtoni
ENSPKIG00000000911	smfn	77	84.459	ENSHGLG00000013556	REXO2	85	81.188	Heterocephalus_glaber_female
ENSPKIG00000000911	smfn	77	85.135	ENSHGLG00100005257	REXO2	85	81.683	Heterocephalus_glaber_male
ENSPKIG00000000911	smfn	77	83.108	ENSHCOG00000007122	smfn	98	79.444	Hippocampus_comes
ENSPKIG00000000911	smfn	77	89.865	ENSIPUG00000020440	rexo2	79	81.860	Ictalurus_punctatus
ENSPKIG00000000911	smfn	77	85.135	ENSSTOG00000012465	REXO2	91	77.523	Ictidomys_tridecemlineatus
ENSPKIG00000000911	smfn	77	85.135	ENSJJAG00000013710	-	88	79.327	Jaculus_jaculus
ENSPKIG00000000911	smfn	73	57.767	ENSJJAG00000022605	-	84	57.767	Jaculus_jaculus
ENSPKIG00000000911	smfn	77	83.784	ENSKMAG00000016795	smfn	71	77.612	Kryptolebias_marmoratus
ENSPKIG00000000911	smfn	77	83.108	ENSLBEG00000006021	smfn	96	82.873	Labrus_bergylta
ENSPKIG00000000911	smfn	77	76.000	ENSLACG00000018623	REXO2	94	64.957	Latimeria_chalumnae
ENSPKIG00000000911	smfn	77	89.865	ENSLOCG00000002389	smfn	99	84.689	Lepisosteus_oculatus
ENSPKIG00000000911	smfn	77	85.135	ENSLAFG00000012451	REXO2	88	78.846	Loxodonta_africana
ENSPKIG00000000911	smfn	77	84.459	ENSMFAG00000041155	REXO2	88	78.365	Macaca_fascicularis
ENSPKIG00000000911	smfn	77	84.459	ENSMMUG00000012269	REXO2	88	78.365	Macaca_mulatta
ENSPKIG00000000911	smfn	77	84.459	ENSMNEG00000033379	REXO2	88	78.365	Macaca_nemestrina
ENSPKIG00000000911	smfn	77	84.459	ENSMLEG00000036571	REXO2	88	78.365	Mandrillus_leucophaeus
ENSPKIG00000000911	smfn	77	85.811	ENSMAMG00000021209	smfn	88	69.388	Mastacembelus_armatus
ENSPKIG00000000911	smfn	77	83.784	ENSMZEG00005020730	REXO2	92	68.016	Maylandia_zebra
ENSPKIG00000000911	smfn	77	83.784	ENSMZEG00005023224	-	92	68.016	Maylandia_zebra
ENSPKIG00000000911	smfn	63	82.927	ENSMGAG00000003026	REXO2	96	79.618	Meleagris_gallopavo
ENSPKIG00000000911	smfn	77	84.459	ENSMAUG00000014576	Rexo2	88	78.469	Mesocricetus_auratus
ENSPKIG00000000911	smfn	77	85.135	ENSMICG00000010094	REXO2	88	79.327	Microcebus_murinus
ENSPKIG00000000911	smfn	77	84.459	ENSMOCG00000009016	Rexo2	88	78.846	Microtus_ochrogaster
ENSPKIG00000000911	smfn	77	83.784	ENSMMOG00000006430	smfn	73	80.102	Mola_mola
ENSPKIG00000000911	smfn	77	84.459	ENSMODG00000013913	REXO2	88	78.846	Monodelphis_domestica
ENSPKIG00000000911	smfn	77	85.811	ENSMALG00000018130	smfn	65	74.009	Monopterus_albus
ENSPKIG00000000911	smfn	77	83.108	MGP_CAROLIEiJ_G0032166	Rexo2	85	78.713	Mus_caroli
ENSPKIG00000000911	smfn	77	83.108	ENSMUSG00000032026	Rexo2	85	78.713	Mus_musculus
ENSPKIG00000000911	smfn	77	83.108	MGP_PahariEiJ_G0015034	Rexo2	85	78.713	Mus_pahari
ENSPKIG00000000911	smfn	77	83.108	MGP_SPRETEiJ_G0033305	Rexo2	85	78.713	Mus_spretus
ENSPKIG00000000911	smfn	77	84.459	ENSMPUG00000003947	REXO2	91	77.419	Mustela_putorius_furo
ENSPKIG00000000911	smfn	77	84.459	ENSMLUG00000009030	REXO2	88	77.885	Myotis_lucifugus
ENSPKIG00000000911	smfn	77	85.135	ENSNGAG00000008819	Rexo2	99	81.188	Nannospalax_galili
ENSPKIG00000000911	smfn	77	84.459	ENSNBRG00000006529	smfn	97	81.622	Neolamprologus_brichardi
ENSPKIG00000000911	smfn	77	84.459	ENSNLEG00000029745	REXO2	88	78.365	Nomascus_leucogenys
ENSPKIG00000000911	smfn	77	83.784	ENSMEUG00000011558	REXO2	98	76.636	Notamacropus_eugenii
ENSPKIG00000000911	smfn	72	57.426	ENSOPRG00000011076	REXO2	91	54.587	Ochotona_princeps
ENSPKIG00000000911	smfn	77	85.135	ENSODEG00000009750	-	100	82.447	Octodon_degus
ENSPKIG00000000911	smfn	77	66.216	ENSODEG00000016046	-	88	67.232	Octodon_degus
ENSPKIG00000000911	smfn	77	85.135	ENSONIG00000001954	smfn	93	72.646	Oreochromis_niloticus
ENSPKIG00000000911	smfn	77	82.432	ENSOANG00000001754	REXO2	87	76.812	Ornithorhynchus_anatinus
ENSPKIG00000000911	smfn	77	85.135	ENSOCUG00000004274	REXO2	82	79.412	Oryctolagus_cuniculus
ENSPKIG00000000911	smfn	77	87.838	ENSORLG00000005119	smfn	87	67.384	Oryzias_latipes
ENSPKIG00000000911	smfn	77	87.838	ENSORLG00020010121	smfn	87	67.742	Oryzias_latipes_hni
ENSPKIG00000000911	smfn	77	87.838	ENSORLG00015015699	smfn	87	67.384	Oryzias_latipes_hsok
ENSPKIG00000000911	smfn	77	87.838	ENSOMEG00000016878	REXO2	99	65.217	Oryzias_melastigma
ENSPKIG00000000911	smfn	54	89.524	ENSOMEG00000008940	-	99	81.560	Oryzias_melastigma
ENSPKIG00000000911	smfn	77	85.135	ENSOGAG00000016860	REXO2	88	79.327	Otolemur_garnettii
ENSPKIG00000000911	smfn	77	84.459	ENSOARG00000001040	REXO2	95	81.188	Ovis_aries
ENSPKIG00000000911	smfn	77	84.459	ENSPPAG00000039849	REXO2	88	78.365	Pan_paniscus
ENSPKIG00000000911	smfn	77	84.459	ENSPPRG00000007255	REXO2	88	78.846	Panthera_pardus
ENSPKIG00000000911	smfn	77	84.459	ENSPTIG00000015578	REXO2	100	81.915	Panthera_tigris_altaica
ENSPKIG00000000911	smfn	77	84.459	ENSPTRG00000004306	REXO2	88	78.365	Pan_troglodytes
ENSPKIG00000000911	smfn	77	84.459	ENSPANG00000010675	REXO2	88	78.365	Papio_anubis
ENSPKIG00000000911	smfn	77	83.784	ENSPSIG00000005151	REXO2	72	80.402	Pelodiscus_sinensis
ENSPKIG00000000911	smfn	77	86.486	ENSPMGG00000007442	smfn	96	85.083	Periophthalmus_magnuspinnatus
ENSPKIG00000000911	smfn	52	89.109	ENSPEMG00000001421	Rexo2	87	64.423	Peromyscus_maniculatus_bairdii
ENSPKIG00000000911	smfn	77	84.459	ENSPCIG00000011227	REXO2	54	78.922	Phascolarctos_cinereus
ENSPKIG00000000911	smfn	95	66.667	ENSPFOG00000017861	smfn	97	81.218	Poecilia_formosa
ENSPKIG00000000911	smfn	77	83.108	ENSPLAG00000007327	REXO2	90	64.557	Poecilia_latipinna
ENSPKIG00000000911	smfn	95	66.667	ENSPMEG00000017343	smfn	95	66.667	Poecilia_mexicana
ENSPKIG00000000911	smfn	96	65.568	ENSPREG00000016438	smfn	96	65.568	Poecilia_reticulata
ENSPKIG00000000911	smfn	77	84.459	ENSPPYG00000003895	REXO2	88	78.365	Pongo_abelii
ENSPKIG00000000911	smfn	77	83.784	ENSPCAG00000005237	REXO2	88	78.365	Procavia_capensis
ENSPKIG00000000911	smfn	76	85.616	ENSPCOG00000027639	REXO2	87	80.233	Propithecus_coquereli
ENSPKIG00000000911	smfn	62	84.167	ENSPVAG00000005295	REXO2	88	68.095	Pteropus_vampyrus
ENSPKIG00000000911	smfn	77	83.108	ENSPNYG00000018401	smfn	92	67.611	Pundamilia_nyererei
ENSPKIG00000000911	smfn	100	69.039	ENSPNAG00000005290	smfn	100	69.751	Pygocentrus_nattereri
ENSPKIG00000000911	smfn	77	83.108	ENSRNOG00000018939	Rexo2	85	78.713	Rattus_norvegicus
ENSPKIG00000000911	smfn	77	84.459	ENSRBIG00000037809	REXO2	88	78.365	Rhinopithecus_bieti
ENSPKIG00000000911	smfn	77	84.459	ENSRROG00000038928	REXO2	88	78.365	Rhinopithecus_roxellana
ENSPKIG00000000911	smfn	85	38.462	YLR059C	REX2	87	38.462	Saccharomyces_cerevisiae
ENSPKIG00000000911	smfn	77	85.135	ENSSBOG00000028651	REXO2	85	81.683	Saimiri_boliviensis_boliviensis
ENSPKIG00000000911	smfn	77	84.459	ENSSHAG00000008008	REXO2	87	78.922	Sarcophilus_harrisii
ENSPKIG00000000911	smfn	77	89.865	ENSSFOG00015022414	smfn	97	87.912	Scleropages_formosus
ENSPKIG00000000911	smfn	77	85.811	ENSSMAG00000003168	smfn	98	64.413	Scophthalmus_maximus
ENSPKIG00000000911	smfn	77	86.486	ENSSDUG00000015624	smfn	70	81.068	Seriola_dumerili
ENSPKIG00000000911	smfn	77	86.486	ENSSLDG00000014005	smfn	82	73.276	Seriola_lalandi_dorsalis
ENSPKIG00000000911	smfn	66	87.402	ENSSARG00000014530	REXO2	100	87.402	Sorex_araneus
ENSPKIG00000000911	smfn	61	83.761	ENSSPUG00000006005	REXO2	83	75.974	Sphenodon_punctatus
ENSPKIG00000000911	smfn	77	85.811	ENSSPAG00000001530	smfn	97	85.083	Stegastes_partitus
ENSPKIG00000000911	smfn	77	84.459	ENSSSCG00000015056	REXO2	88	78.846	Sus_scrofa
ENSPKIG00000000911	smfn	77	83.108	ENSTGUG00000000121	REXO2	86	78.607	Taeniopygia_guttata
ENSPKIG00000000911	smfn	77	83.784	ENSTRUG00000021529	smfn	90	63.806	Takifugu_rubripes
ENSPKIG00000000911	smfn	77	86.486	ENSTNIG00000008588	smfn	89	78.607	Tetraodon_nigroviridis
ENSPKIG00000000911	smfn	77	85.135	ENSTBEG00000017040	REXO2	88	79.327	Tupaia_belangeri
ENSPKIG00000000911	smfn	77	84.459	ENSTTRG00000014928	REXO2	88	77.990	Tursiops_truncatus
ENSPKIG00000000911	smfn	76	84.932	ENSUAMG00000019096	REXO2	89	78.409	Ursus_americanus
ENSPKIG00000000911	smfn	84	79.012	ENSUMAG00000003770	REXO2	91	77.064	Ursus_maritimus
ENSPKIG00000000911	smfn	77	60.811	ENSVPAG00000006301	REXO2	100	62.032	Vicugna_pacos
ENSPKIG00000000911	smfn	77	84.459	ENSVVUG00000025223	REXO2	88	78.846	Vulpes_vulpes
ENSPKIG00000000911	smfn	77	86.486	ENSXETG00000012648	rexo2	81	81.313	Xenopus_tropicalis
ENSPKIG00000000911	smfn	77	83.108	ENSXCOG00000018838	smfn	95	81.183	Xiphophorus_couchianus
ENSPKIG00000000911	smfn	96	64.727	ENSXMAG00000021125	smfn	86	64.727	Xiphophorus_maculatus