EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000001319 (Gene tree)
Gene ID: 111840640
Gene Symbol: ercc3
Alias: -
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 12155 bases
Position: chrPGUA01000009.1:547565-559719
Accession: 111840640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000014161	ResIII	PF04851.15	3.2e-15	1	1
ENSPKIP00000014245	ResIII	PF04851.15	3.2e-15	1	1
ENSPKIP00000014193	ResIII	PF04851.15	3.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000038632	-	5111	-	ENSPKIP00000014193	783 (aa)	XP_023661411	UPI000CD666B3
ENSPKIT00000038600	-	5432	-	ENSPKIP00000014161	755 (aa)	-	-
ENSPKIT00000038684	-	2361	-	ENSPKIP00000014245	786 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000001319's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03022	Basal transcription factors	KEGG
pki03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000001319's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000001319	ercc3	99	89.036	ENSG00000163161	ERCC3	99	95.031	Homo_sapiens
ENSPKIG00000001319	ercc3	100	91.931	ENSAPOG00000014383	ercc3	100	91.071	Acanthochromis_polyacanthus
ENSPKIG00000001319	ercc3	99	88.609	ENSAMEG00000016840	ERCC3	100	87.134	Ailuropoda_melanoleuca
ENSPKIG00000001319	ercc3	99	91.534	ENSACIG00000000126	ercc3	100	90.452	Amphilophus_citrinellus
ENSPKIG00000001319	ercc3	100	92.063	ENSAOCG00000009396	ercc3	100	91.199	Amphiprion_ocellaris
ENSPKIG00000001319	ercc3	100	92.063	ENSAPEG00000023077	ercc3	100	91.199	Amphiprion_percula
ENSPKIG00000001319	ercc3	100	91.837	ENSATEG00000014860	ercc3	100	92.219	Anabas_testudineus
ENSPKIG00000001319	ercc3	94	89.296	ENSAPLG00000012068	ERCC3	98	89.296	Anas_platyrhynchos
ENSPKIG00000001319	ercc3	95	88.904	ENSACAG00000009919	ERCC3	100	88.904	Anolis_carolinensis
ENSPKIG00000001319	ercc3	99	89.168	ENSANAG00000031091	ERCC3	100	87.929	Aotus_nancymaae
ENSPKIG00000001319	ercc3	100	92.196	ENSACLG00000022508	ercc3	100	91.454	Astatotilapia_calliptera
ENSPKIG00000001319	ercc3	100	94.305	ENSAMXG00000036947	ercc3	100	92.976	Astyanax_mexicanus
ENSPKIG00000001319	ercc3	100	87.421	ENSBTAG00000020777	ERCC3	100	87.421	Bos_taurus
ENSPKIG00000001319	ercc3	99	63.885	WBGene00013441	xpb-1	96	63.519	Caenorhabditis_elegans
ENSPKIG00000001319	ercc3	99	89.036	ENSCJAG00000010416	ERCC3	100	87.802	Callithrix_jacchus
ENSPKIG00000001319	ercc3	99	88.639	ENSCAFG00000004497	ERCC3	99	87.852	Canis_familiaris
ENSPKIG00000001319	ercc3	99	88.639	ENSCAFG00020003495	ERCC3	99	87.852	Canis_lupus_dingo
ENSPKIG00000001319	ercc3	99	88.639	ENSCHIG00000014551	ERCC3	100	87.548	Capra_hircus
ENSPKIG00000001319	ercc3	99	88.079	ENSTSYG00000004137	ERCC3	99	87.242	Carlito_syrichta
ENSPKIG00000001319	ercc3	81	80.000	ENSCAPG00000017027	ERCC3	93	80.000	Cavia_aperea
ENSPKIG00000001319	ercc3	99	87.715	ENSCPOG00000002144	ERCC3	100	86.404	Cavia_porcellus
ENSPKIG00000001319	ercc3	99	89.036	ENSCCAG00000024421	ERCC3	100	87.802	Cebus_capucinus
ENSPKIG00000001319	ercc3	99	89.036	ENSCATG00000032313	ERCC3	100	87.802	Cercocebus_atys
ENSPKIG00000001319	ercc3	99	88.609	ENSCLAG00000002965	ERCC3	96	87.516	Chinchilla_lanigera
ENSPKIG00000001319	ercc3	99	88.904	ENSCSAG00000016827	ERCC3	100	87.675	Chlorocebus_sabaeus
ENSPKIG00000001319	ercc3	83	94.152	ENSCHOG00000007414	ERCC3	83	94.152	Choloepus_hoffmanni
ENSPKIG00000001319	ercc3	95	89.736	ENSCPBG00000013638	ERCC3	100	89.736	Chrysemys_picta_bellii
ENSPKIG00000001319	ercc3	99	71.186	ENSCING00000002867	ercc3	96	71.186	Ciona_intestinalis
ENSPKIG00000001319	ercc3	99	89.168	ENSCANG00000007094	ERCC3	100	87.929	Colobus_angolensis_palliatus
ENSPKIG00000001319	ercc3	99	88.742	ENSCGRG00001009426	Ercc3	100	87.516	Cricetulus_griseus_chok1gshd
ENSPKIG00000001319	ercc3	97	88.646	ENSCGRG00000015547	Ercc3	100	87.385	Cricetulus_griseus_crigri
ENSPKIG00000001319	ercc3	100	90.489	ENSCSEG00000016479	ercc3	100	89.172	Cynoglossus_semilaevis
ENSPKIG00000001319	ercc3	99	91.391	ENSCVAG00000015177	ercc3	100	90.051	Cyprinodon_variegatus
ENSPKIG00000001319	ercc3	100	93.642	ENSDARG00000002402	ercc3	100	92.720	Danio_rerio
ENSPKIG00000001319	ercc3	58	92.986	ENSDNOG00000035027	ERCC3	95	92.986	Dasypus_novemcinctus
ENSPKIG00000001319	ercc3	99	89.168	ENSDORG00000004671	Ercc3	99	88.107	Dipodomys_ordii
ENSPKIG00000001319	ercc3	99	68.872	FBgn0001179	hay	99	67.375	Drosophila_melanogaster
ENSPKIG00000001319	ercc3	90	88.535	ENSETEG00000019887	ERCC3	90	88.535	Echinops_telfairi
ENSPKIG00000001319	ercc3	99	81.046	ENSEBUG00000009773	ercc3	100	78.994	Eptatretus_burgeri
ENSPKIG00000001319	ercc3	99	88.859	ENSEASG00005022466	ERCC3	100	85.254	Equus_asinus_asinus
ENSPKIG00000001319	ercc3	99	88.639	ENSECAG00000006589	ERCC3	100	87.548	Equus_caballus
ENSPKIG00000001319	ercc3	94	89.873	ENSEEUG00000001057	ERCC3	97	89.873	Erinaceus_europaeus
ENSPKIG00000001319	ercc3	100	91.546	ENSELUG00000000089	ercc3	99	90.446	Esox_lucius
ENSPKIG00000001319	ercc3	99	88.243	ENSFCAG00000006989	ERCC3	100	87.166	Felis_catus
ENSPKIG00000001319	ercc3	99	88.228	ENSFALG00000003936	ERCC3	99	87.259	Ficedula_albicollis
ENSPKIG00000001319	ercc3	99	88.079	ENSFDAG00000011924	ERCC3	100	86.641	Fukomys_damarensis
ENSPKIG00000001319	ercc3	100	89.668	ENSFHEG00000005185	ercc3	100	89.668	Fundulus_heteroclitus
ENSPKIG00000001319	ercc3	99	89.920	ENSGMOG00000018032	ercc3	99	88.761	Gadus_morhua
ENSPKIG00000001319	ercc3	99	88.742	ENSGALG00000011515	ERCC3	99	87.821	Gallus_gallus
ENSPKIG00000001319	ercc3	99	91.523	ENSGAFG00000011936	ercc3	100	90.306	Gambusia_affinis
ENSPKIG00000001319	ercc3	99	91.090	ENSGACG00000015218	ercc3	100	89.809	Gasterosteus_aculeatus
ENSPKIG00000001319	ercc3	95	89.875	ENSGAGG00000018579	ERCC3	100	89.875	Gopherus_agassizii
ENSPKIG00000001319	ercc3	99	89.036	ENSGGOG00000015255	ERCC3	100	87.802	Gorilla_gorilla
ENSPKIG00000001319	ercc3	100	92.196	ENSHBUG00000003818	ercc3	100	91.454	Haplochromis_burtoni
ENSPKIG00000001319	ercc3	99	88.212	ENSHGLG00000011014	ERCC3	100	87.006	Heterocephalus_glaber_female
ENSPKIG00000001319	ercc3	99	88.212	ENSHGLG00100013806	ERCC3	100	87.006	Heterocephalus_glaber_male
ENSPKIG00000001319	ercc3	100	90.476	ENSHCOG00000016924	ercc3	100	89.668	Hippocampus_comes
ENSPKIG00000001319	ercc3	99	93.236	ENSIPUG00000021000	ercc3	99	91.902	Ictalurus_punctatus
ENSPKIG00000001319	ercc3	99	88.904	ENSSTOG00000011001	ERCC3	100	87.802	Ictidomys_tridecemlineatus
ENSPKIG00000001319	ercc3	94	87.571	ENSJJAG00000001117	Ercc3	100	87.571	Jaculus_jaculus
ENSPKIG00000001319	ercc3	99	90.861	ENSKMAG00000021764	ercc3	100	89.796	Kryptolebias_marmoratus
ENSPKIG00000001319	ercc3	99	91.788	ENSLBEG00000000468	ercc3	100	90.689	Labrus_bergylta
ENSPKIG00000001319	ercc3	99	83.812	ENSLACG00000014815	ERCC3	100	82.538	Latimeria_chalumnae
ENSPKIG00000001319	ercc3	93	88.260	ENSLOCG00000010907	ercc3	87	88.260	Lepisosteus_oculatus
ENSPKIG00000001319	ercc3	100	88.492	ENSLAFG00000014866	ERCC3	100	87.643	Loxodonta_africana
ENSPKIG00000001319	ercc3	99	89.036	ENSMFAG00000003370	ERCC3	100	87.802	Macaca_fascicularis
ENSPKIG00000001319	ercc3	99	85.137	ENSMNEG00000004215	ERCC3	100	84.065	Macaca_nemestrina
ENSPKIG00000001319	ercc3	99	89.036	ENSMLEG00000042061	ERCC3	100	87.802	Mandrillus_leucophaeus
ENSPKIG00000001319	ercc3	100	91.571	ENSMAMG00000004505	ercc3	99	91.571	Mastacembelus_armatus
ENSPKIG00000001319	ercc3	100	92.196	ENSMZEG00005004854	ercc3	100	91.454	Maylandia_zebra
ENSPKIG00000001319	ercc3	94	89.250	ENSMGAG00000011706	ERCC3	100	89.250	Meleagris_gallopavo
ENSPKIG00000001319	ercc3	99	88.757	ENSMAUG00000004515	Ercc3	100	87.659	Mesocricetus_auratus
ENSPKIG00000001319	ercc3	99	88.477	ENSMICG00000009578	ERCC3	100	87.389	Microcebus_murinus
ENSPKIG00000001319	ercc3	99	88.742	ENSMOCG00000021767	Ercc3	100	87.516	Microtus_ochrogaster
ENSPKIG00000001319	ercc3	100	90.741	ENSMMOG00000018174	ercc3	99	90.039	Mola_mola
ENSPKIG00000001319	ercc3	99	89.272	ENSMODG00000018695	ERCC3	100	88.025	Monodelphis_domestica
ENSPKIG00000001319	ercc3	100	91.005	ENSMALG00000014944	ercc3	100	89.923	Monopterus_albus
ENSPKIG00000001319	ercc3	99	89.007	MGP_CAROLIEiJ_G0022075	Ercc3	100	87.771	Mus_caroli
ENSPKIG00000001319	ercc3	99	89.418	ENSMUSG00000024382	Ercc3	100	88.168	Mus_musculus
ENSPKIG00000001319	ercc3	99	88.874	MGP_PahariEiJ_G0018809	Ercc3	100	87.643	Mus_pahari
ENSPKIG00000001319	ercc3	99	89.286	MGP_SPRETEiJ_G0022987	Ercc3	100	88.041	Mus_spretus
ENSPKIG00000001319	ercc3	100	87.643	ENSMPUG00000012021	ERCC3	100	87.643	Mustela_putorius_furo
ENSPKIG00000001319	ercc3	96	84.405	ENSMLUG00000007429	ERCC3	99	84.405	Myotis_lucifugus
ENSPKIG00000001319	ercc3	99	86.170	ENSNGAG00000019598	Ercc3	99	88.995	Nannospalax_galili
ENSPKIG00000001319	ercc3	100	92.196	ENSNBRG00000019074	ercc3	100	91.454	Neolamprologus_brichardi
ENSPKIG00000001319	ercc3	95	86.704	ENSNLEG00000015665	ERCC3	97	86.704	Nomascus_leucogenys
ENSPKIG00000001319	ercc3	99	86.358	ENSOPRG00000004553	ERCC3	100	85.478	Ochotona_princeps
ENSPKIG00000001319	ercc3	99	88.904	ENSODEG00000005795	ERCC3	100	87.802	Octodon_degus
ENSPKIG00000001319	ercc3	100	92.063	ENSONIG00000003255	ercc3	100	91.199	Oreochromis_niloticus
ENSPKIG00000001319	ercc3	99	88.904	ENSOCUG00000002248	ERCC3	100	87.675	Oryctolagus_cuniculus
ENSPKIG00000001319	ercc3	99	91.667	ENSORLG00000004393	ercc3	100	90.573	Oryzias_latipes
ENSPKIG00000001319	ercc3	99	91.667	ENSORLG00020017718	ercc3	99	91.610	Oryzias_latipes_hni
ENSPKIG00000001319	ercc3	100	90.701	ENSORLG00015015695	ercc3	100	90.701	Oryzias_latipes_hsok
ENSPKIG00000001319	ercc3	100	91.942	ENSOMEG00000015374	ercc3	100	91.210	Oryzias_melastigma
ENSPKIG00000001319	ercc3	99	88.538	ENSOGAG00000009103	ERCC3	100	87.452	Otolemur_garnettii
ENSPKIG00000001319	ercc3	99	88.639	ENSOARG00000016147	ERCC3	100	87.421	Ovis_aries
ENSPKIG00000001319	ercc3	99	89.036	ENSPPAG00000036166	ERCC3	100	87.802	Pan_paniscus
ENSPKIG00000001319	ercc3	99	88.375	ENSPPRG00000001305	ERCC3	100	87.294	Panthera_pardus
ENSPKIG00000001319	ercc3	95	88.382	ENSPTIG00000016969	ERCC3	100	88.382	Panthera_tigris_altaica
ENSPKIG00000001319	ercc3	99	89.036	ENSPTRG00000046940	ERCC3	100	87.802	Pan_troglodytes
ENSPKIG00000001319	ercc3	99	89.036	ENSPANG00000007699	ERCC3	100	87.802	Papio_anubis
ENSPKIG00000001319	ercc3	95	89.182	ENSPSIG00000014682	ERCC3	100	89.182	Pelodiscus_sinensis
ENSPKIG00000001319	ercc3	99	90.451	ENSPMGG00000017885	ercc3	99	89.017	Periophthalmus_magnuspinnatus
ENSPKIG00000001319	ercc3	99	88.874	ENSPEMG00000013733	Ercc3	100	87.643	Peromyscus_maniculatus_bairdii
ENSPKIG00000001319	ercc3	93	78.992	ENSPMAG00000005081	ercc3	99	78.992	Petromyzon_marinus
ENSPKIG00000001319	ercc3	99	89.536	ENSPCIG00000011821	ERCC3	100	88.408	Phascolarctos_cinereus
ENSPKIG00000001319	ercc3	99	91.391	ENSPFOG00000015604	ercc3	100	89.668	Poecilia_formosa
ENSPKIG00000001319	ercc3	99	88.639	ENSPLAG00000022245	ercc3	100	91.262	Poecilia_latipinna
ENSPKIG00000001319	ercc3	99	91.391	ENSPMEG00000016987	ercc3	100	89.668	Poecilia_mexicana
ENSPKIG00000001319	ercc3	99	91.391	ENSPREG00000020921	ercc3	100	90.179	Poecilia_reticulata
ENSPKIG00000001319	ercc3	99	88.259	ENSPPYG00000012769	ERCC3	100	87.056	Pongo_abelii
ENSPKIG00000001319	ercc3	99	88.639	ENSPCOG00000024903	ERCC3	100	87.421	Propithecus_coquereli
ENSPKIG00000001319	ercc3	90	87.984	ENSPVAG00000013774	ERCC3	90	87.984	Pteropus_vampyrus
ENSPKIG00000001319	ercc3	100	92.196	ENSPNYG00000001208	ercc3	100	91.454	Pundamilia_nyererei
ENSPKIG00000001319	ercc3	100	93.510	ENSPNAG00000005748	ercc3	100	91.954	Pygocentrus_nattereri
ENSPKIG00000001319	ercc3	99	88.609	ENSRNOG00000013180	Ercc3	100	87.389	Rattus_norvegicus
ENSPKIG00000001319	ercc3	99	89.036	ENSRBIG00000027692	ERCC3	100	87.802	Rhinopithecus_bieti
ENSPKIG00000001319	ercc3	99	89.168	ENSRROG00000040673	ERCC3	100	87.929	Rhinopithecus_roxellana
ENSPKIG00000001319	ercc3	95	56.463	YIL143C	SSL2	85	55.645	Saccharomyces_cerevisiae
ENSPKIG00000001319	ercc3	99	88.771	ENSSBOG00000023079	ERCC3	100	87.548	Saimiri_boliviensis_boliviensis
ENSPKIG00000001319	ercc3	99	89.272	ENSSHAG00000007423	ERCC3	100	87.898	Sarcophilus_harrisii
ENSPKIG00000001319	ercc3	100	94.305	ENSSFOG00015012753	ercc3	100	93.742	Scleropages_formosus
ENSPKIG00000001319	ercc3	99	91.270	ENSSMAG00000011915	ercc3	100	89.962	Scophthalmus_maximus
ENSPKIG00000001319	ercc3	99	92.553	ENSSDUG00000021181	ercc3	100	91.454	Seriola_dumerili
ENSPKIG00000001319	ercc3	99	92.686	ENSSLDG00000008744	ercc3	98	91.454	Seriola_lalandi_dorsalis
ENSPKIG00000001319	ercc3	57	80.046	ENSSARG00000000751	-	85	80.046	Sorex_araneus
ENSPKIG00000001319	ercc3	94	87.836	ENSSPUG00000015183	ERCC3	91	87.836	Sphenodon_punctatus
ENSPKIG00000001319	ercc3	100	92.063	ENSSPAG00000004748	ercc3	100	91.071	Stegastes_partitus
ENSPKIG00000001319	ercc3	100	87.675	ENSSSCG00000015721	ERCC3	100	88.571	Sus_scrofa
ENSPKIG00000001319	ercc3	99	89.272	ENSTGUG00000004920	-	100	88.402	Taeniopygia_guttata
ENSPKIG00000001319	ercc3	100	90.331	ENSTRUG00000017185	ercc3	100	88.633	Takifugu_rubripes
ENSPKIG00000001319	ercc3	100	87.815	ENSTNIG00000005457	ercc3	99	87.815	Tetraodon_nigroviridis
ENSPKIG00000001319	ercc3	83	87.778	ENSTBEG00000009381	ERCC3	81	87.778	Tupaia_belangeri
ENSPKIG00000001319	ercc3	70	92.830	ENSUAMG00000009589	-	100	92.830	Ursus_americanus
ENSPKIG00000001319	ercc3	99	88.742	ENSUMAG00000008361	ERCC3	100	87.389	Ursus_maritimus
ENSPKIG00000001319	ercc3	95	88.520	ENSVVUG00000010431	ERCC3	100	88.520	Vulpes_vulpes
ENSPKIG00000001319	ercc3	99	88.243	ENSXETG00000033646	ercc3	100	87.056	Xenopus_tropicalis
ENSPKIG00000001319	ercc3	99	91.258	ENSXCOG00000001791	ercc3	99	90.181	Xiphophorus_couchianus
ENSPKIG00000001319	ercc3	99	91.391	ENSXMAG00000003641	ercc3	100	90.179	Xiphophorus_maculatus