EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000001408 (Gene tree)
Gene ID: 111853519
Gene Symbol: -
Alias: -
Full Name: serine and arginine rich splicing factor 3
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 6259 bases
Position: chrPGUA01000106.1:975005-981263
Accession: 111853519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000014290	RRM_1	PF00076.22	5e-18	1	1
ENSPKIP00000014303	RRM_1	PF00076.22	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000038742	-	1788	-	ENSPKIP00000014303	259 (aa)	-	-
ENSPKIT00000038729	-	2352	-	ENSPKIP00000014290	168 (aa)	XP_023686266	UPI000CD5CB56

Gene Model

Click here to download ENSPKIG00000001408's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG
pki05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000001408's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000001408	-	56	67.368	ENSPKIG00000022669	SRSF7	58	69.767
ENSPKIG00000001408	-	56	71.579	ENSPKIG00000017425	srsf7b	70	42.442
ENSPKIG00000001408	-	61	40.196	ENSPKIG00000018463	-	83	41.379
ENSPKIG00000001408	-	60	91.089	ENSPKIG00000004949	srsf3a	59	91.089
ENSPKIG00000001408	-	60	41.000	ENSPKIG00000015703	-	65	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000001408	-	57	95.876	ENSAPLG00000013776	SRSF3	58	96.875	Anas_platyrhynchos
ENSPKIG00000001408	-	97	73.171	ENSCGRG00001006656	-	61	85.417	Cricetulus_griseus_chok1gshd
ENSPKIG00000001408	-	94	84.277	ENSCGRG00001024550	-	59	90.625	Cricetulus_griseus_chok1gshd
ENSPKIG00000001408	-	92	85.897	ENSCGRG00000019294	-	62	90.625	Cricetulus_griseus_crigri
ENSPKIG00000001408	-	97	73.171	ENSCGRG00000007542	-	61	85.417	Cricetulus_griseus_crigri
ENSPKIG00000001408	-	88	81.081	ENSODEG00000003509	-	64	85.417	Octodon_degus
ENSPKIG00000001408	-	89	66.887	ENSPCIG00000007090	-	59	78.351	Phascolarctos_cinereus