EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000001653 (Gene tree)
Gene ID: 111844663
Gene Symbol: rtca
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 6555 bases
Position: chrPGUA01000137.1:626962-633516
Accession: 111844663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000014667	RTC	PF01137.21	6.2e-87	1	1
ENSPKIP00000014667	RTC_insert	PF05189.13	3.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000039116	-	3494	-	ENSPKIP00000014667	364 (aa)	XP_023669100	UPI000CD66B2D

Gene Model

Click here to download ENSPKIG00000001653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000001653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000001653	rtca	100	74.317	ENSG00000137996	RTCA	100	74.317	Homo_sapiens
ENSPKIG00000001653	rtca	100	80.769	ENSAPOG00000001345	rtca	99	80.769	Acanthochromis_polyacanthus
ENSPKIG00000001653	rtca	73	75.465	ENSAMEG00000008855	RTCA	100	75.465	Ailuropoda_melanoleuca
ENSPKIG00000001653	rtca	100	80.495	ENSACIG00000019643	rtca	100	80.495	Amphilophus_citrinellus
ENSPKIG00000001653	rtca	100	80.220	ENSAOCG00000014979	rtca	99	80.220	Amphiprion_ocellaris
ENSPKIG00000001653	rtca	100	79.945	ENSAPEG00000006945	rtca	99	79.945	Amphiprion_percula
ENSPKIG00000001653	rtca	96	81.948	ENSATEG00000006315	rtca	96	81.948	Anabas_testudineus
ENSPKIG00000001653	rtca	96	70.255	ENSAPLG00000015430	RTCA	100	70.255	Anas_platyrhynchos
ENSPKIG00000001653	rtca	100	73.770	ENSANAG00000025446	RTCA	100	73.770	Aotus_nancymaae
ENSPKIG00000001653	rtca	100	80.495	ENSACLG00000020770	rtca	99	80.495	Astatotilapia_calliptera
ENSPKIG00000001653	rtca	100	86.813	ENSAMXG00000043271	rtca	100	86.813	Astyanax_mexicanus
ENSPKIG00000001653	rtca	100	74.863	ENSBTAG00000006321	RTCA	100	74.863	Bos_taurus
ENSPKIG00000001653	rtca	100	74.044	ENSCJAG00000003398	RTCA	100	74.044	Callithrix_jacchus
ENSPKIG00000001653	rtca	100	74.044	ENSCAFG00000020010	RTCA	68	74.044	Canis_familiaris
ENSPKIG00000001653	rtca	100	74.044	ENSCAFG00020011528	RTCA	57	74.044	Canis_lupus_dingo
ENSPKIG00000001653	rtca	100	74.590	ENSCHIG00000018937	RTCA	100	74.590	Capra_hircus
ENSPKIG00000001653	rtca	100	73.497	ENSTSYG00000011305	RTCA	100	73.497	Carlito_syrichta
ENSPKIG00000001653	rtca	100	73.770	ENSCCAG00000021844	RTCA	99	75.529	Cebus_capucinus
ENSPKIG00000001653	rtca	100	71.504	ENSCATG00000019364	RTCA	100	74.110	Cercocebus_atys
ENSPKIG00000001653	rtca	87	75.316	ENSCLAG00000006125	RTCA	100	75.316	Chinchilla_lanigera
ENSPKIG00000001653	rtca	100	74.317	ENSCSAG00000001509	RTCA	100	74.317	Chlorocebus_sabaeus
ENSPKIG00000001653	rtca	100	72.951	ENSCHOG00000005211	RTCA	100	72.951	Choloepus_hoffmanni
ENSPKIG00000001653	rtca	100	70.411	ENSCPBG00000026658	RTCA	100	70.411	Chrysemys_picta_bellii
ENSPKIG00000001653	rtca	99	54.396	ENSCING00000007875	-	99	54.396	Ciona_intestinalis
ENSPKIG00000001653	rtca	99	54.945	ENSCSAVG00000007269	-	99	54.945	Ciona_savignyi
ENSPKIG00000001653	rtca	100	74.044	ENSCANG00000040106	RTCA	100	74.044	Colobus_angolensis_palliatus
ENSPKIG00000001653	rtca	73	73.978	ENSCGRG00001013163	Rtca	85	73.978	Cricetulus_griseus_chok1gshd
ENSPKIG00000001653	rtca	99	76.309	ENSCSEG00000000530	rtca	98	76.309	Cynoglossus_semilaevis
ENSPKIG00000001653	rtca	100	65.405	ENSCVAG00000021809	rtca	100	65.405	Cyprinodon_variegatus
ENSPKIG00000001653	rtca	100	88.187	ENSDARG00000002215	rtca	100	88.187	Danio_rerio
ENSPKIG00000001653	rtca	100	74.044	ENSDNOG00000000456	RTCA	100	74.044	Dasypus_novemcinctus
ENSPKIG00000001653	rtca	100	72.951	ENSDORG00000005448	Rtca	100	72.951	Dipodomys_ordii
ENSPKIG00000001653	rtca	99	40.443	FBgn0025630	Rtca	99	40.443	Drosophila_melanogaster
ENSPKIG00000001653	rtca	95	53.736	ENSEBUG00000008556	rtca	96	53.736	Eptatretus_burgeri
ENSPKIG00000001653	rtca	100	74.044	ENSEASG00005015926	RTCA	100	74.044	Equus_asinus_asinus
ENSPKIG00000001653	rtca	85	30.094	ENSECAG00000015973	RCL1	90	30.094	Equus_caballus
ENSPKIG00000001653	rtca	100	74.044	ENSECAG00000019831	RTCA	100	74.044	Equus_caballus
ENSPKIG00000001653	rtca	91	66.957	ENSEEUG00000001165	RTCA	99	66.957	Erinaceus_europaeus
ENSPKIG00000001653	rtca	99	82.320	ENSELUG00000003741	rtca	99	82.320	Esox_lucius
ENSPKIG00000001653	rtca	100	74.590	ENSFCAG00000024460	RTCA	100	74.590	Felis_catus
ENSPKIG00000001653	rtca	91	72.289	ENSFALG00000002443	RTCA	89	72.289	Ficedula_albicollis
ENSPKIG00000001653	rtca	100	73.224	ENSFDAG00000012070	-	100	73.224	Fukomys_damarensis
ENSPKIG00000001653	rtca	98	59.392	ENSFDAG00000016084	-	100	59.392	Fukomys_damarensis
ENSPKIG00000001653	rtca	55	84.158	ENSFHEG00000002868	rtca	87	84.158	Fundulus_heteroclitus
ENSPKIG00000001653	rtca	100	79.670	ENSGMOG00000013264	rtca	100	79.670	Gadus_morhua
ENSPKIG00000001653	rtca	100	70.411	ENSGALG00000005277	RTCA	100	70.411	Gallus_gallus
ENSPKIG00000001653	rtca	100	79.670	ENSGAFG00000011853	rtca	99	79.670	Gambusia_affinis
ENSPKIG00000001653	rtca	100	78.846	ENSGACG00000013497	rtca	100	78.846	Gasterosteus_aculeatus
ENSPKIG00000001653	rtca	80	70.307	ENSGAGG00000023306	RTCA	100	70.307	Gopherus_agassizii
ENSPKIG00000001653	rtca	100	73.770	ENSGGOG00000009546	-	100	73.786	Gorilla_gorilla
ENSPKIG00000001653	rtca	100	73.224	ENSGGOG00000044018	-	100	73.224	Gorilla_gorilla
ENSPKIG00000001653	rtca	100	80.495	ENSHBUG00000002114	rtca	99	80.495	Haplochromis_burtoni
ENSPKIG00000001653	rtca	100	73.224	ENSHGLG00000002617	RTCA	100	73.224	Heterocephalus_glaber_female
ENSPKIG00000001653	rtca	100	73.224	ENSHGLG00100006056	RTCA	100	73.224	Heterocephalus_glaber_male
ENSPKIG00000001653	rtca	100	69.231	ENSHCOG00000020628	rtca	89	69.231	Hippocampus_comes
ENSPKIG00000001653	rtca	100	85.165	ENSIPUG00000024803	rtca	100	85.165	Ictalurus_punctatus
ENSPKIG00000001653	rtca	100	69.126	ENSSTOG00000013528	-	100	69.126	Ictidomys_tridecemlineatus
ENSPKIG00000001653	rtca	100	64.754	ENSSTOG00000033099	-	100	64.754	Ictidomys_tridecemlineatus
ENSPKIG00000001653	rtca	100	53.151	ENSJJAG00000016178	Rtca	100	53.151	Jaculus_jaculus
ENSPKIG00000001653	rtca	100	81.044	ENSKMAG00000006651	rtca	99	81.044	Kryptolebias_marmoratus
ENSPKIG00000001653	rtca	88	80.878	ENSLBEG00000002448	-	99	80.878	Labrus_bergylta
ENSPKIG00000001653	rtca	99	80.886	ENSLBEG00000028971	rtca	99	80.886	Labrus_bergylta
ENSPKIG00000001653	rtca	100	70.137	ENSLACG00000013666	RTCA	100	70.137	Latimeria_chalumnae
ENSPKIG00000001653	rtca	100	80.274	ENSLOCG00000000093	rtca	99	80.274	Lepisosteus_oculatus
ENSPKIG00000001653	rtca	100	72.678	ENSLAFG00000001473	RTCA	100	72.678	Loxodonta_africana
ENSPKIG00000001653	rtca	100	74.317	ENSMFAG00000034132	RTCA	100	74.317	Macaca_fascicularis
ENSPKIG00000001653	rtca	100	74.317	ENSMMUG00000019105	RTCA	100	74.317	Macaca_mulatta
ENSPKIG00000001653	rtca	85	30.312	ENSMNEG00000012288	RCL1	71	31.452	Macaca_nemestrina
ENSPKIG00000001653	rtca	84	74.434	ENSMNEG00000037163	RTCA	100	74.434	Macaca_nemestrina
ENSPKIG00000001653	rtca	100	60.656	ENSMLEG00000042151	RTCA	100	60.656	Mandrillus_leucophaeus
ENSPKIG00000001653	rtca	100	82.143	ENSMAMG00000016536	rtca	100	82.143	Mastacembelus_armatus
ENSPKIG00000001653	rtca	100	80.495	ENSMZEG00005017945	rtca	99	80.495	Maylandia_zebra
ENSPKIG00000001653	rtca	87	72.013	ENSMGAG00000006892	RTCA	99	72.013	Meleagris_gallopavo
ENSPKIG00000001653	rtca	100	73.497	ENSMAUG00000008488	Rtca	100	73.497	Mesocricetus_auratus
ENSPKIG00000001653	rtca	84	75.081	ENSMICG00000008643	RTCA	100	75.081	Microcebus_murinus
ENSPKIG00000001653	rtca	100	73.497	ENSMOCG00000016660	Rtca	100	73.497	Microtus_ochrogaster
ENSPKIG00000001653	rtca	84	82.736	ENSMMOG00000007750	rtca	100	82.736	Mola_mola
ENSPKIG00000001653	rtca	100	73.497	ENSMODG00000003557	RTCA	100	73.497	Monodelphis_domestica
ENSPKIG00000001653	rtca	100	81.868	ENSMALG00000020844	rtca	100	81.868	Monopterus_albus
ENSPKIG00000001653	rtca	100	71.858	MGP_CAROLIEiJ_G0025565	Rtca	100	73.239	Mus_caroli
ENSPKIG00000001653	rtca	100	71.311	ENSMUSG00000000339	Rtca	100	73.239	Mus_musculus
ENSPKIG00000001653	rtca	100	71.858	MGP_PahariEiJ_G0027011	Rtca	100	73.239	Mus_pahari
ENSPKIG00000001653	rtca	100	71.585	MGP_SPRETEiJ_G0026515	Rtca	100	72.535	Mus_spretus
ENSPKIG00000001653	rtca	100	74.863	ENSMPUG00000012119	RTCA	100	74.863	Mustela_putorius_furo
ENSPKIG00000001653	rtca	100	69.755	ENSMLUG00000009922	RTCA	100	69.755	Myotis_lucifugus
ENSPKIG00000001653	rtca	100	72.951	ENSNGAG00000011540	Rtca	99	72.951	Nannospalax_galili
ENSPKIG00000001653	rtca	100	80.495	ENSNBRG00000003062	rtca	99	80.495	Neolamprologus_brichardi
ENSPKIG00000001653	rtca	100	74.044	ENSNLEG00000031426	RTCA	100	74.044	Nomascus_leucogenys
ENSPKIG00000001653	rtca	73	69.888	ENSOPRG00000012092	RTCA	71	69.888	Ochotona_princeps
ENSPKIG00000001653	rtca	95	73.851	ENSODEG00000006990	RTCA	96	74.074	Octodon_degus
ENSPKIG00000001653	rtca	100	80.495	ENSONIG00000007753	rtca	99	80.495	Oreochromis_niloticus
ENSPKIG00000001653	rtca	87	73.817	ENSOANG00000012055	RTCA	98	73.817	Ornithorhynchus_anatinus
ENSPKIG00000001653	rtca	100	73.770	ENSOCUG00000014247	RTCA	100	73.770	Oryctolagus_cuniculus
ENSPKIG00000001653	rtca	100	82.692	ENSORLG00000013605	rtca	100	82.692	Oryzias_latipes
ENSPKIG00000001653	rtca	100	82.967	ENSORLG00020001904	rtca	100	82.967	Oryzias_latipes_hni
ENSPKIG00000001653	rtca	100	82.967	ENSORLG00015021064	rtca	100	82.967	Oryzias_latipes_hsok
ENSPKIG00000001653	rtca	100	81.319	ENSOMEG00000000756	rtca	100	81.319	Oryzias_melastigma
ENSPKIG00000001653	rtca	100	66.393	ENSOGAG00000005627	RTCA	100	66.393	Otolemur_garnettii
ENSPKIG00000001653	rtca	87	75.472	ENSOARG00000018122	RTCA	100	75.472	Ovis_aries
ENSPKIG00000001653	rtca	100	70.976	ENSPPAG00000035119	RTCA	100	73.463	Pan_paniscus
ENSPKIG00000001653	rtca	100	74.863	ENSPPRG00000000350	RTCA	100	74.863	Panthera_pardus
ENSPKIG00000001653	rtca	100	74.317	ENSPTIG00000012816	RTCA	100	74.317	Panthera_tigris_altaica
ENSPKIG00000001653	rtca	100	70.976	ENSPTRG00000001004	RTCA	100	73.463	Pan_troglodytes
ENSPKIG00000001653	rtca	100	74.044	ENSPANG00000000346	RTCA	100	74.044	Papio_anubis
ENSPKIG00000001653	rtca	100	69.863	ENSPSIG00000011408	RTCA	100	69.863	Pelodiscus_sinensis
ENSPKIG00000001653	rtca	100	72.951	ENSPEMG00000018582	Rtca	100	72.951	Peromyscus_maniculatus_bairdii
ENSPKIG00000001653	rtca	99	57.064	ENSPMAG00000009110	rtca	98	57.064	Petromyzon_marinus
ENSPKIG00000001653	rtca	100	73.770	ENSPCIG00000007684	RTCA	100	73.770	Phascolarctos_cinereus
ENSPKIG00000001653	rtca	100	79.726	ENSPFOG00000004824	rtca	100	79.726	Poecilia_formosa
ENSPKIG00000001653	rtca	100	80.220	ENSPLAG00000011753	rtca	99	80.220	Poecilia_latipinna
ENSPKIG00000001653	rtca	100	80.220	ENSPMEG00000020469	rtca	99	80.220	Poecilia_mexicana
ENSPKIG00000001653	rtca	100	79.396	ENSPREG00000001365	rtca	99	79.396	Poecilia_reticulata
ENSPKIG00000001653	rtca	100	74.317	ENSPPYG00000001115	RTCA	100	74.317	Pongo_abelii
ENSPKIG00000001653	rtca	100	70.492	ENSPCAG00000005076	RTCA	100	70.492	Procavia_capensis
ENSPKIG00000001653	rtca	100	74.863	ENSPCOG00000005603	RTCA	100	74.863	Propithecus_coquereli
ENSPKIG00000001653	rtca	100	69.921	ENSPVAG00000009478	RTCA	100	69.921	Pteropus_vampyrus
ENSPKIG00000001653	rtca	100	80.495	ENSPNYG00000004722	rtca	99	80.495	Pundamilia_nyererei
ENSPKIG00000001653	rtca	100	86.538	ENSPNAG00000022270	rtca	100	86.538	Pygocentrus_nattereri
ENSPKIG00000001653	rtca	100	71.858	ENSRNOG00000014575	Rtca	100	71.858	Rattus_norvegicus
ENSPKIG00000001653	rtca	100	71.240	ENSRBIG00000041180	RTCA	100	73.786	Rhinopithecus_bieti
ENSPKIG00000001653	rtca	100	73.770	ENSRROG00000024929	RTCA	100	73.770	Rhinopithecus_roxellana
ENSPKIG00000001653	rtca	100	73.224	ENSSBOG00000028626	RTCA	100	73.224	Saimiri_boliviensis_boliviensis
ENSPKIG00000001653	rtca	100	74.044	ENSSHAG00000001758	RTCA	100	74.044	Sarcophilus_harrisii
ENSPKIG00000001653	rtca	98	79.330	ENSSMAG00000014680	rtca	97	79.330	Scophthalmus_maximus
ENSPKIG00000001653	rtca	98	82.682	ENSSDUG00000015585	rtca	98	82.044	Seriola_dumerili
ENSPKIG00000001653	rtca	96	83.381	ENSSLDG00000018985	rtca	95	83.381	Seriola_lalandi_dorsalis
ENSPKIG00000001653	rtca	87	68.770	ENSSARG00000013993	RTCA	100	68.770	Sorex_araneus
ENSPKIG00000001653	rtca	100	80.769	ENSSPAG00000011938	rtca	99	80.769	Stegastes_partitus
ENSPKIG00000001653	rtca	100	74.044	ENSSSCG00000006865	RTCA	100	74.044	Sus_scrofa
ENSPKIG00000001653	rtca	100	71.233	ENSTGUG00000005154	RTCA	100	71.233	Taeniopygia_guttata
ENSPKIG00000001653	rtca	100	80.495	ENSTRUG00000008799	rtca	100	80.495	Takifugu_rubripes
ENSPKIG00000001653	rtca	100	79.945	ENSTNIG00000004725	rtca	100	79.945	Tetraodon_nigroviridis
ENSPKIG00000001653	rtca	57	62.500	ENSTBEG00000000943	RTCA	59	62.500	Tupaia_belangeri
ENSPKIG00000001653	rtca	100	71.768	ENSTTRG00000015327	RTCA	100	71.768	Tursiops_truncatus
ENSPKIG00000001653	rtca	85	30.408	ENSUAMG00000005598	RCL1	98	30.408	Ursus_americanus
ENSPKIG00000001653	rtca	94	73.761	ENSUAMG00000017265	RTCA	96	73.761	Ursus_americanus
ENSPKIG00000001653	rtca	100	74.044	ENSUMAG00000007881	RTCA	100	74.044	Ursus_maritimus
ENSPKIG00000001653	rtca	87	66.562	ENSVPAG00000001039	RTCA	84	66.562	Vicugna_pacos
ENSPKIG00000001653	rtca	100	74.044	ENSVVUG00000022041	RTCA	68	74.044	Vulpes_vulpes
ENSPKIG00000001653	rtca	98	59.945	ENSXETG00000031661	RTCA	98	59.945	Xenopus_tropicalis
ENSPKIG00000001653	rtca	100	68.956	ENSXCOG00000008002	rtca	100	68.956	Xiphophorus_couchianus
ENSPKIG00000001653	rtca	100	79.396	ENSXMAG00000005482	rtca	99	79.396	Xiphophorus_maculatus