EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000001881 (Gene tree)
Gene ID: 111846996
Gene Symbol: rtcb
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 8282 bases
Position: chrPGUA01000163.1:693677-701958
Accession: 111846996
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000015048	RtcB	PF01139.17	4.3e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000039506	-	3619	-	ENSPKIP00000015048	505 (aa)	XP_023673552	UPI000CD5CC81

Gene Model

Click here to download ENSPKIG00000001881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000001881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000001881	rtcb	100	93.069	ENSG00000100220	RTCB	100	93.069	Homo_sapiens
ENSPKIG00000001881	rtcb	100	95.842	ENSAPOG00000006040	rtcb	100	95.842	Acanthochromis_polyacanthus
ENSPKIG00000001881	rtcb	100	93.069	ENSAMEG00000016152	RTCB	100	93.069	Ailuropoda_melanoleuca
ENSPKIG00000001881	rtcb	100	91.287	ENSACIG00000009083	rtcb	100	91.287	Amphilophus_citrinellus
ENSPKIG00000001881	rtcb	100	95.842	ENSAOCG00000005662	rtcb	100	96.739	Amphiprion_ocellaris
ENSPKIG00000001881	rtcb	100	95.842	ENSAPEG00000024701	rtcb	100	95.842	Amphiprion_percula
ENSPKIG00000001881	rtcb	96	90.965	ENSAPEG00000024653	rtcb	100	90.965	Amphiprion_percula
ENSPKIG00000001881	rtcb	100	95.248	ENSATEG00000000618	rtcb	100	95.248	Anabas_testudineus
ENSPKIG00000001881	rtcb	100	90.366	ENSACAG00000014817	RTCB	100	90.366	Anolis_carolinensis
ENSPKIG00000001881	rtcb	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSPKIG00000001881	rtcb	100	78.416	ENSANAG00000018191	-	91	78.416	Aotus_nancymaae
ENSPKIG00000001881	rtcb	100	94.653	ENSACLG00000008367	rtcb	100	95.870	Astatotilapia_calliptera
ENSPKIG00000001881	rtcb	100	97.030	ENSAMXG00000042320	rtcb	100	97.030	Astyanax_mexicanus
ENSPKIG00000001881	rtcb	100	93.267	ENSBTAG00000011070	RTCB	100	93.267	Bos_taurus
ENSPKIG00000001881	rtcb	100	73.663	WBGene00008877	rtcb-1	100	73.663	Caenorhabditis_elegans
ENSPKIG00000001881	rtcb	100	92.871	ENSCJAG00000006128	RTCB	100	92.871	Callithrix_jacchus
ENSPKIG00000001881	rtcb	100	88.911	ENSCAFG00000010789	-	100	88.911	Canis_familiaris
ENSPKIG00000001881	rtcb	100	93.069	ENSCAFG00000001785	RTCB	100	93.069	Canis_familiaris
ENSPKIG00000001881	rtcb	100	93.069	ENSCAFG00020004890	-	100	93.069	Canis_lupus_dingo
ENSPKIG00000001881	rtcb	87	89.091	ENSCAFG00020018953	-	99	89.091	Canis_lupus_dingo
ENSPKIG00000001881	rtcb	100	93.267	ENSCHIG00000027009	-	100	93.267	Capra_hircus
ENSPKIG00000001881	rtcb	100	93.267	ENSTSYG00000012320	RTCB	100	93.267	Carlito_syrichta
ENSPKIG00000001881	rtcb	94	93.501	ENSCAPG00000011647	RTCB	96	93.501	Cavia_aperea
ENSPKIG00000001881	rtcb	100	92.871	ENSCCAG00000000618	RTCB	100	92.871	Cebus_capucinus
ENSPKIG00000001881	rtcb	100	92.871	ENSCATG00000033424	RTCB	100	92.871	Cercocebus_atys
ENSPKIG00000001881	rtcb	100	92.673	ENSCLAG00000007997	RTCB	100	92.673	Chinchilla_lanigera
ENSPKIG00000001881	rtcb	100	92.673	ENSCSAG00000008351	RTCB	100	92.673	Chlorocebus_sabaeus
ENSPKIG00000001881	rtcb	100	79.010	ENSCHOG00000009123	RTCB	100	79.010	Choloepus_hoffmanni
ENSPKIG00000001881	rtcb	100	92.871	ENSCPBG00000023184	RTCB	100	92.871	Chrysemys_picta_bellii
ENSPKIG00000001881	rtcb	100	82.574	ENSCING00000003830	-	100	82.574	Ciona_intestinalis
ENSPKIG00000001881	rtcb	100	83.168	ENSCSAVG00000008124	-	100	82.460	Ciona_savignyi
ENSPKIG00000001881	rtcb	100	89.109	ENSCANG00000001891	RTCB	100	89.109	Colobus_angolensis_palliatus
ENSPKIG00000001881	rtcb	100	93.069	ENSCGRG00001011173	Rtcb	100	93.069	Cricetulus_griseus_chok1gshd
ENSPKIG00000001881	rtcb	93	93.631	ENSCGRG00000009587	-	96	93.631	Cricetulus_griseus_crigri
ENSPKIG00000001881	rtcb	100	94.257	ENSCSEG00000003986	rtcb	100	94.257	Cynoglossus_semilaevis
ENSPKIG00000001881	rtcb	82	93.750	ENSCVAG00000000569	rtcb	95	93.750	Cyprinodon_variegatus
ENSPKIG00000001881	rtcb	100	95.644	ENSDARG00000101047	rtcb	100	95.644	Danio_rerio
ENSPKIG00000001881	rtcb	80	89.189	ENSDNOG00000012425	RTCB	99	89.189	Dasypus_novemcinctus
ENSPKIG00000001881	rtcb	100	93.069	ENSDORG00000010855	Rtcb	100	93.069	Dipodomys_ordii
ENSPKIG00000001881	rtcb	99	83.499	FBgn0032781	RtcB	99	83.499	Drosophila_melanogaster
ENSPKIG00000001881	rtcb	100	86.931	ENSETEG00000001988	RTCB	100	86.931	Echinops_telfairi
ENSPKIG00000001881	rtcb	100	85.941	ENSEBUG00000014235	rtcb	100	85.941	Eptatretus_burgeri
ENSPKIG00000001881	rtcb	100	93.267	ENSEASG00005019059	RTCB	100	93.267	Equus_asinus_asinus
ENSPKIG00000001881	rtcb	100	93.267	ENSECAG00000023998	RTCB	100	93.267	Equus_caballus
ENSPKIG00000001881	rtcb	88	84.978	ENSEEUG00000006251	RTCB	99	84.978	Erinaceus_europaeus
ENSPKIG00000001881	rtcb	100	83.365	ENSELUG00000009275	rtcb	100	83.365	Esox_lucius
ENSPKIG00000001881	rtcb	100	93.069	ENSFCAG00000026480	RTCB	100	93.069	Felis_catus
ENSPKIG00000001881	rtcb	100	94.059	ENSFALG00000013334	RTCB	100	94.059	Ficedula_albicollis
ENSPKIG00000001881	rtcb	100	92.871	ENSFDAG00000018150	RTCB	100	92.871	Fukomys_damarensis
ENSPKIG00000001881	rtcb	100	94.851	ENSFHEG00000009595	rtcb	100	94.851	Fundulus_heteroclitus
ENSPKIG00000001881	rtcb	100	94.059	ENSGMOG00000018882	rtcb	100	94.059	Gadus_morhua
ENSPKIG00000001881	rtcb	100	93.465	ENSGALG00000012611	RTCB	100	93.465	Gallus_gallus
ENSPKIG00000001881	rtcb	100	94.257	ENSGAFG00000004198	rtcb	100	94.257	Gambusia_affinis
ENSPKIG00000001881	rtcb	100	95.446	ENSGACG00000000586	rtcb	100	95.446	Gasterosteus_aculeatus
ENSPKIG00000001881	rtcb	93	92.128	ENSGAGG00000019133	RTCB	98	92.128	Gopherus_agassizii
ENSPKIG00000001881	rtcb	100	93.069	ENSGGOG00000011402	RTCB	100	93.069	Gorilla_gorilla
ENSPKIG00000001881	rtcb	100	94.653	ENSHBUG00000020571	rtcb	100	94.653	Haplochromis_burtoni
ENSPKIG00000001881	rtcb	93	67.585	ENSHGLG00000001066	-	99	67.585	Heterocephalus_glaber_female
ENSPKIG00000001881	rtcb	100	92.871	ENSHGLG00000004492	RTCB	100	92.871	Heterocephalus_glaber_female
ENSPKIG00000001881	rtcb	100	92.871	ENSHGLG00100008965	RTCB	100	92.871	Heterocephalus_glaber_male
ENSPKIG00000001881	rtcb	100	93.097	ENSHCOG00000006450	rtcb	100	93.097	Hippocampus_comes
ENSPKIG00000001881	rtcb	100	96.436	ENSIPUG00000015443	rtcb	100	96.436	Ictalurus_punctatus
ENSPKIG00000001881	rtcb	100	92.673	ENSSTOG00000003878	RTCB	100	92.673	Ictidomys_tridecemlineatus
ENSPKIG00000001881	rtcb	100	93.267	ENSJJAG00000010667	Rtcb	100	93.267	Jaculus_jaculus
ENSPKIG00000001881	rtcb	100	94.851	ENSKMAG00000013178	rtcb	100	94.851	Kryptolebias_marmoratus
ENSPKIG00000001881	rtcb	100	93.663	ENSLBEG00000000214	rtcb	100	93.663	Labrus_bergylta
ENSPKIG00000001881	rtcb	100	94.851	ENSLBEG00000010566	RTCB	100	94.851	Labrus_bergylta
ENSPKIG00000001881	rtcb	100	93.069	ENSLACG00000013033	RTCB	100	93.069	Latimeria_chalumnae
ENSPKIG00000001881	rtcb	100	96.040	ENSLOCG00000016515	rtcb	99	96.040	Lepisosteus_oculatus
ENSPKIG00000001881	rtcb	100	92.475	ENSLAFG00000002082	RTCB	100	92.475	Loxodonta_africana
ENSPKIG00000001881	rtcb	100	92.673	ENSMFAG00000034419	RTCB	100	92.673	Macaca_fascicularis
ENSPKIG00000001881	rtcb	100	92.673	ENSMMUG00000006720	RTCB	100	92.673	Macaca_mulatta
ENSPKIG00000001881	rtcb	100	92.673	ENSMNEG00000040669	RTCB	100	92.673	Macaca_nemestrina
ENSPKIG00000001881	rtcb	100	92.871	ENSMLEG00000040505	RTCB	100	92.871	Mandrillus_leucophaeus
ENSPKIG00000001881	rtcb	100	95.248	ENSMAMG00000020676	rtcb	100	95.248	Mastacembelus_armatus
ENSPKIG00000001881	rtcb	100	94.653	ENSMZEG00005018942	rtcb	100	94.653	Maylandia_zebra
ENSPKIG00000001881	rtcb	100	93.097	ENSMGAG00000012805	RTCB	100	93.097	Meleagris_gallopavo
ENSPKIG00000001881	rtcb	60	98.230	ENSMAUG00000008301	Rtcb	100	98.230	Mesocricetus_auratus
ENSPKIG00000001881	rtcb	100	74.059	ENSMICG00000036677	-	100	74.059	Microcebus_murinus
ENSPKIG00000001881	rtcb	100	92.871	ENSMICG00000013303	-	100	92.871	Microcebus_murinus
ENSPKIG00000001881	rtcb	100	93.465	ENSMOCG00000002440	Rtcb	100	93.465	Microtus_ochrogaster
ENSPKIG00000001881	rtcb	100	95.050	ENSMMOG00000005987	rtcb	100	95.050	Mola_mola
ENSPKIG00000001881	rtcb	100	93.663	ENSMODG00000001414	RTCB	100	93.663	Monodelphis_domestica
ENSPKIG00000001881	rtcb	100	95.248	ENSMALG00000007603	rtcb	100	95.248	Monopterus_albus
ENSPKIG00000001881	rtcb	100	93.069	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.069	Mus_caroli
ENSPKIG00000001881	rtcb	100	93.069	ENSMUSG00000001783	Rtcb	100	93.069	Mus_musculus
ENSPKIG00000001881	rtcb	100	93.069	MGP_PahariEiJ_G0031396	Rtcb	100	93.069	Mus_pahari
ENSPKIG00000001881	rtcb	100	93.069	MGP_SPRETEiJ_G0016507	Rtcb	100	93.069	Mus_spretus
ENSPKIG00000001881	rtcb	100	93.069	ENSMPUG00000012285	RTCB	100	93.069	Mustela_putorius_furo
ENSPKIG00000001881	rtcb	100	90.335	ENSMLUG00000007803	RTCB	100	90.335	Myotis_lucifugus
ENSPKIG00000001881	rtcb	72	97.333	ENSNGAG00000005093	Rtcb	100	97.333	Nannospalax_galili
ENSPKIG00000001881	rtcb	100	94.851	ENSNBRG00000017202	rtcb	100	94.851	Neolamprologus_brichardi
ENSPKIG00000001881	rtcb	100	93.069	ENSNLEG00000004960	RTCB	100	93.069	Nomascus_leucogenys
ENSPKIG00000001881	rtcb	100	70.297	ENSMEUG00000007809	-	100	70.297	Notamacropus_eugenii
ENSPKIG00000001881	rtcb	73	95.000	ENSOPRG00000003488	RTCB	79	95.000	Ochotona_princeps
ENSPKIG00000001881	rtcb	82	98.113	ENSODEG00000013033	-	100	98.113	Octodon_degus
ENSPKIG00000001881	rtcb	100	62.178	ENSODEG00000005042	-	100	62.178	Octodon_degus
ENSPKIG00000001881	rtcb	100	95.050	ENSONIG00000007474	rtcb	100	95.050	Oreochromis_niloticus
ENSPKIG00000001881	rtcb	100	93.465	ENSOANG00000005524	RTCB	100	93.465	Ornithorhynchus_anatinus
ENSPKIG00000001881	rtcb	93	92.340	ENSOCUG00000008270	RTCB	96	92.340	Oryctolagus_cuniculus
ENSPKIG00000001881	rtcb	100	94.851	ENSORLG00000020093	rtcb	100	94.851	Oryzias_latipes
ENSPKIG00000001881	rtcb	100	94.455	ENSORLG00020003706	rtcb	99	95.579	Oryzias_latipes_hni
ENSPKIG00000001881	rtcb	100	94.653	ENSORLG00015002968	rtcb	100	94.653	Oryzias_latipes_hsok
ENSPKIG00000001881	rtcb	100	94.257	ENSOMEG00000021278	rtcb	100	94.257	Oryzias_melastigma
ENSPKIG00000001881	rtcb	100	92.277	ENSOGAG00000001425	RTCB	100	92.277	Otolemur_garnettii
ENSPKIG00000001881	rtcb	100	93.267	ENSOARG00000018008	RTCB	100	93.267	Ovis_aries
ENSPKIG00000001881	rtcb	100	93.069	ENSPPAG00000028667	RTCB	100	93.069	Pan_paniscus
ENSPKIG00000001881	rtcb	100	93.069	ENSPPRG00000004038	RTCB	100	93.069	Panthera_pardus
ENSPKIG00000001881	rtcb	94	89.053	ENSPTIG00000020499	RTCB	97	90.105	Panthera_tigris_altaica
ENSPKIG00000001881	rtcb	100	93.069	ENSPTRG00000014287	RTCB	100	93.069	Pan_troglodytes
ENSPKIG00000001881	rtcb	100	92.673	ENSPANG00000016035	RTCB	100	92.673	Papio_anubis
ENSPKIG00000001881	rtcb	91	93.478	ENSPSIG00000011690	RTCB	100	93.478	Pelodiscus_sinensis
ENSPKIG00000001881	rtcb	100	95.248	ENSPMGG00000016672	rtcb	100	95.248	Periophthalmus_magnuspinnatus
ENSPKIG00000001881	rtcb	100	93.069	ENSPEMG00000019548	Rtcb	100	93.069	Peromyscus_maniculatus_bairdii
ENSPKIG00000001881	rtcb	100	90.693	ENSPMAG00000005657	rtcb	100	90.693	Petromyzon_marinus
ENSPKIG00000001881	rtcb	100	93.663	ENSPCIG00000009467	RTCB	100	93.663	Phascolarctos_cinereus
ENSPKIG00000001881	rtcb	100	94.653	ENSPFOG00000003058	rtcb	100	94.653	Poecilia_formosa
ENSPKIG00000001881	rtcb	100	94.851	ENSPLAG00000017663	rtcb	100	94.851	Poecilia_latipinna
ENSPKIG00000001881	rtcb	100	94.653	ENSPMEG00000006227	rtcb	100	94.653	Poecilia_mexicana
ENSPKIG00000001881	rtcb	100	94.455	ENSPREG00000018467	rtcb	100	94.455	Poecilia_reticulata
ENSPKIG00000001881	rtcb	100	93.069	ENSPPYG00000011752	RTCB	100	93.069	Pongo_abelii
ENSPKIG00000001881	rtcb	93	76.059	ENSPCAG00000013641	RTCB	100	76.059	Procavia_capensis
ENSPKIG00000001881	rtcb	100	92.871	ENSPCOG00000017243	RTCB	100	92.871	Propithecus_coquereli
ENSPKIG00000001881	rtcb	93	91.915	ENSPVAG00000002380	RTCB	100	91.915	Pteropus_vampyrus
ENSPKIG00000001881	rtcb	100	94.653	ENSPNYG00000022760	rtcb	100	94.653	Pundamilia_nyererei
ENSPKIG00000001881	rtcb	100	96.634	ENSPNAG00000009209	rtcb	100	96.634	Pygocentrus_nattereri
ENSPKIG00000001881	rtcb	100	93.069	ENSRNOG00000004813	Rtcb	100	93.069	Rattus_norvegicus
ENSPKIG00000001881	rtcb	100	84.783	ENSRBIG00000042090	RTCB	100	84.783	Rhinopithecus_bieti
ENSPKIG00000001881	rtcb	100	88.515	ENSSBOG00000020085	-	100	88.515	Saimiri_boliviensis_boliviensis
ENSPKIG00000001881	rtcb	94	93.882	ENSSHAG00000016277	RTCB	100	93.882	Sarcophilus_harrisii
ENSPKIG00000001881	rtcb	100	94.455	ENSSFOG00015011572	RTCB	100	94.455	Scleropages_formosus
ENSPKIG00000001881	rtcb	100	95.248	ENSSFOG00015000763	rtcb	100	95.248	Scleropages_formosus
ENSPKIG00000001881	rtcb	100	92.871	ENSSMAG00000005096	rtcb	100	92.871	Scophthalmus_maximus
ENSPKIG00000001881	rtcb	100	94.653	ENSSDUG00000012605	rtcb	100	94.653	Seriola_dumerili
ENSPKIG00000001881	rtcb	100	94.653	ENSSLDG00000019458	rtcb	100	94.653	Seriola_lalandi_dorsalis
ENSPKIG00000001881	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSPKIG00000001881	rtcb	100	92.475	ENSSPUG00000012814	RTCB	100	92.475	Sphenodon_punctatus
ENSPKIG00000001881	rtcb	100	95.842	ENSSPAG00000004623	rtcb	100	95.842	Stegastes_partitus
ENSPKIG00000001881	rtcb	100	93.069	ENSSSCG00000000158	RTCB	100	93.069	Sus_scrofa
ENSPKIG00000001881	rtcb	100	94.059	ENSTGUG00000010947	RTCB	99	94.059	Taeniopygia_guttata
ENSPKIG00000001881	rtcb	91	96.522	ENSTRUG00000009880	rtcb	100	96.522	Takifugu_rubripes
ENSPKIG00000001881	rtcb	100	94.059	ENSTNIG00000002484	rtcb	100	94.059	Tetraodon_nigroviridis
ENSPKIG00000001881	rtcb	100	80.000	ENSTBEG00000004418	RTCB	100	80.000	Tupaia_belangeri
ENSPKIG00000001881	rtcb	93	91.489	ENSTTRG00000006417	RTCB	100	91.489	Tursiops_truncatus
ENSPKIG00000001881	rtcb	100	93.069	ENSUAMG00000022792	RTCB	100	93.069	Ursus_americanus
ENSPKIG00000001881	rtcb	100	93.069	ENSUMAG00000017225	RTCB	100	93.069	Ursus_maritimus
ENSPKIG00000001881	rtcb	100	92.871	ENSVPAG00000005375	RTCB	100	92.871	Vicugna_pacos
ENSPKIG00000001881	rtcb	100	93.069	ENSVVUG00000023408	RTCB	100	94.103	Vulpes_vulpes
ENSPKIG00000001881	rtcb	100	93.465	ENSXETG00000011523	rtcb	100	93.465	Xenopus_tropicalis
ENSPKIG00000001881	rtcb	100	94.257	ENSXMAG00000002855	rtcb	100	94.257	Xiphophorus_maculatus