EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000001942 (Gene tree)
Gene ID: 111842534
Gene Symbol: e4f1
Alias: -
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 12530 bases
Position: chrPGUA01000093.1:1218914-1231443
Accession: 111842534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000015141	zf-C2H2	PF00096.26	1.6e-28	1	5
ENSPKIP00000015141	zf-C2H2	PF00096.26	1.6e-28	2	5
ENSPKIP00000015141	zf-C2H2	PF00096.26	1.6e-28	3	5
ENSPKIP00000015141	zf-C2H2	PF00096.26	1.6e-28	4	5
ENSPKIP00000015141	zf-C2H2	PF00096.26	1.6e-28	5	5
ENSPKIP00000015118	zf-C2H2	PF00096.26	2.2e-28	1	5
ENSPKIP00000015118	zf-C2H2	PF00096.26	2.2e-28	2	5
ENSPKIP00000015118	zf-C2H2	PF00096.26	2.2e-28	3	5
ENSPKIP00000015118	zf-C2H2	PF00096.26	2.2e-28	4	5
ENSPKIP00000015118	zf-C2H2	PF00096.26	2.2e-28	5	5
ENSPKIP00000015141	zf-met	PF12874.7	0.00016	1	1
ENSPKIP00000015118	zf-met	PF12874.7	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000039600	-	2229	-	ENSPKIP00000015141	742 (aa)	-	-
ENSPKIT00000039577	-	2283	XM_023809232	ENSPKIP00000015118	760 (aa)	XP_023665000	-

Gene Model

Click here to download ENSPKIG00000001942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000001942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000001942	e4f1	88	42.188	ENSPKIG00000012069	-	97	42.188
ENSPKIG00000001942	e4f1	75	38.217	ENSPKIG00000019848	-	64	38.217
ENSPKIG00000001942	e4f1	57	35.652	ENSPKIG00000015492	prdm5	67	35.652
ENSPKIG00000001942	e4f1	62	39.474	ENSPKIG00000015139	znf319b	93	34.500
ENSPKIG00000001942	e4f1	63	37.126	ENSPKIG00000006616	-	60	37.126
ENSPKIG00000001942	e4f1	55	47.170	ENSPKIG00000018168	znf236	76	47.170
ENSPKIG00000001942	e4f1	65	33.929	ENSPKIG00000001492	-	92	41.026
ENSPKIG00000001942	e4f1	74	34.507	ENSPKIG00000016928	znf526	74	34.507
ENSPKIG00000001942	e4f1	53	37.838	ENSPKIG00000019584	patz1	51	31.737
ENSPKIG00000001942	e4f1	62	40.244	ENSPKIG00000012290	-	96	43.548
ENSPKIG00000001942	e4f1	55	39.091	ENSPKIG00000018202	-	70	40.952
ENSPKIG00000001942	e4f1	68	40.260	ENSPKIG00000006563	-	97	38.125
ENSPKIG00000001942	e4f1	62	39.264	ENSPKIG00000009111	-	98	40.000
ENSPKIG00000001942	e4f1	60	41.975	ENSPKIG00000015951	-	72	45.455
ENSPKIG00000001942	e4f1	55	42.553	ENSPKIG00000022251	sall1a	59	42.553
ENSPKIG00000001942	e4f1	53	44.000	ENSPKIG00000002670	-	55	44.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000001942	e4f1	99	60.362	ENSCSEG00000015852	e4f1	97	60.362	Cynoglossus_semilaevis
ENSPKIG00000001942	e4f1	99	55.882	ENSCVAG00000002788	e4f1	100	55.995	Cyprinodon_variegatus
ENSPKIG00000001942	e4f1	67	37.500	ENSEBUG00000016435	e4f1	76	42.162	Eptatretus_burgeri
ENSPKIG00000001942	e4f1	99	54.602	ENSFHEG00000022551	e4f1	97	54.579	Fundulus_heteroclitus
ENSPKIG00000001942	e4f1	87	62.903	ENSGMOG00000011409	e4f1	99	63.062	Gadus_morhua
ENSPKIG00000001942	e4f1	99	59.342	ENSGACG00000011808	e4f1	100	59.788	Gasterosteus_aculeatus
ENSPKIG00000001942	e4f1	99	54.078	ENSHCOG00000016455	e4f1	100	53.616	Hippocampus_comes
ENSPKIG00000001942	e4f1	99	53.510	ENSIPUG00000005379	e4f1	94	59.339	Ictalurus_punctatus
ENSPKIG00000001942	e4f1	99	56.401	ENSLBEG00000026373	e4f1	100	57.503	Labrus_bergylta
ENSPKIG00000001942	e4f1	99	58.466	ENSMMOG00000007612	e4f1	100	59.146	Mola_mola
ENSPKIG00000001942	e4f1	99	56.599	ENSMALG00000007314	e4f1	100	56.671	Monopterus_albus
ENSPKIG00000001942	e4f1	99	55.400	ENSORLG00000009160	e4f1	100	55.838	Oryzias_latipes
ENSPKIG00000001942	e4f1	92	63.326	ENSORLG00020017974	e4f1	100	54.914	Oryzias_latipes_hni
ENSPKIG00000001942	e4f1	99	56.051	ENSORLG00015007385	e4f1	100	56.489	Oryzias_latipes_hsok
ENSPKIG00000001942	e4f1	99	55.856	ENSOMEG00000012220	e4f1	100	55.400	Oryzias_melastigma
ENSPKIG00000001942	e4f1	87	66.129	ENSPMGG00000020527	e4f1	100	66.129	Periophthalmus_magnuspinnatus
ENSPKIG00000001942	e4f1	99	68.767	ENSSFOG00015021291	e4f1	99	69.377	Scleropages_formosus
ENSPKIG00000001942	e4f1	99	56.818	ENSSMAG00000014720	e4f1	100	58.122	Scophthalmus_maximus
ENSPKIG00000001942	e4f1	97	51.720	ENSSPUG00000011420	E4F1	97	50.841	Sphenodon_punctatus
ENSPKIG00000001942	e4f1	99	55.915	ENSTRUG00000005176	e4f1	100	56.234	Takifugu_rubripes
ENSPKIG00000001942	e4f1	95	56.458	ENSTNIG00000018001	e4f1	100	56.342	Tetraodon_nigroviridis
ENSPKIG00000001942	e4f1	66	70.796	ENSXETG00000016091	e4f1	99	70.796	Xenopus_tropicalis