EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000001953 (Gene tree)
Gene ID: 111855019
Gene Symbol: srp54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 12972 bases
Position: chrPGUA01000285.1:75002-87973
Accession: 111855019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000015160	SRP54	PF00448.22	1.4e-77	1	1
ENSPKIP00000015199	SRP54	PF00448.22	1.4e-77	1	1
ENSPKIP00000015160	SRP54_N	PF02881.19	9e-19	1	1
ENSPKIP00000015199	SRP54_N	PF02881.19	9.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000039660	-	1831	-	ENSPKIP00000015199	506 (aa)	-	-
ENSPKIT00000039620	-	3045	-	ENSPKIP00000015160	504 (aa)	XP_023689358	UPI000CD61D82

Gene Model

Click here to download ENSPKIG00000001953's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000001953's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000001953	srp54	100	95.635	ENSG00000100883	SRP54	100	95.682	Homo_sapiens
ENSPKIG00000001953	srp54	100	97.817	ENSAPOG00000011314	srp54	100	97.817	Acanthochromis_polyacanthus
ENSPKIG00000001953	srp54	100	95.635	ENSAMEG00000015544	SRP54	100	95.635	Ailuropoda_melanoleuca
ENSPKIG00000001953	srp54	89	96.214	ENSACIG00000022831	srp54	97	96.214	Amphilophus_citrinellus
ENSPKIG00000001953	srp54	100	97.817	ENSAOCG00000019401	srp54	100	97.817	Amphiprion_ocellaris
ENSPKIG00000001953	srp54	100	97.817	ENSAPEG00000001977	srp54	100	97.890	Amphiprion_percula
ENSPKIG00000001953	srp54	100	97.817	ENSATEG00000013877	srp54	100	97.817	Anabas_testudineus
ENSPKIG00000001953	srp54	94	94.937	ENSAPLG00000010125	SRP54	95	94.937	Anas_platyrhynchos
ENSPKIG00000001953	srp54	65	79.758	ENSACAG00000001124	-	100	79.758	Anolis_carolinensis
ENSPKIG00000001953	srp54	100	95.040	ENSACAG00000002103	-	100	95.040	Anolis_carolinensis
ENSPKIG00000001953	srp54	86	92.396	ENSACAG00000010631	-	100	92.396	Anolis_carolinensis
ENSPKIG00000001953	srp54	100	95.635	ENSANAG00000022133	SRP54	100	95.635	Aotus_nancymaae
ENSPKIG00000001953	srp54	100	97.619	ENSACLG00000015866	srp54	100	97.619	Astatotilapia_calliptera
ENSPKIG00000001953	srp54	100	98.016	ENSAMXG00000032669	SRP54	100	98.016	Astyanax_mexicanus
ENSPKIG00000001953	srp54	100	95.635	ENSBTAG00000019085	SRP54	100	95.635	Bos_taurus
ENSPKIG00000001953	srp54	98	73.293	WBGene00009012	F21D5.7	100	73.293	Caenorhabditis_elegans
ENSPKIG00000001953	srp54	100	95.635	ENSCJAG00000006581	SRP54	100	95.635	Callithrix_jacchus
ENSPKIG00000001953	srp54	100	95.635	ENSCAFG00000013331	SRP54	100	95.635	Canis_familiaris
ENSPKIG00000001953	srp54	100	95.635	ENSCAFG00020023427	SRP54	100	95.635	Canis_lupus_dingo
ENSPKIG00000001953	srp54	100	95.635	ENSCHIG00000026345	SRP54	100	95.635	Capra_hircus
ENSPKIG00000001953	srp54	100	95.437	ENSTSYG00000002680	-	100	95.437	Carlito_syrichta
ENSPKIG00000001953	srp54	94	84.211	ENSTSYG00000035333	-	93	84.211	Carlito_syrichta
ENSPKIG00000001953	srp54	94	61.837	ENSCAPG00000008780	SRP54	100	61.837	Cavia_aperea
ENSPKIG00000001953	srp54	100	95.238	ENSCPOG00000003691	SRP54	100	95.238	Cavia_porcellus
ENSPKIG00000001953	srp54	90	95.476	ENSCCAG00000024179	SRP54	100	95.704	Cebus_capucinus
ENSPKIG00000001953	srp54	100	95.635	ENSCATG00000034083	SRP54	100	95.635	Cercocebus_atys
ENSPKIG00000001953	srp54	100	95.635	ENSCLAG00000015076	SRP54	100	95.635	Chinchilla_lanigera
ENSPKIG00000001953	srp54	100	95.635	ENSCSAG00000015575	SRP54	100	95.635	Chlorocebus_sabaeus
ENSPKIG00000001953	srp54	95	84.407	ENSCHOG00000008986	SRP54	100	84.407	Choloepus_hoffmanni
ENSPKIG00000001953	srp54	100	95.635	ENSCPBG00000026195	SRP54	100	95.635	Chrysemys_picta_bellii
ENSPKIG00000001953	srp54	100	83.333	ENSCING00000007380	-	100	83.333	Ciona_intestinalis
ENSPKIG00000001953	srp54	100	95.635	ENSCANG00000028532	SRP54	100	95.635	Colobus_angolensis_palliatus
ENSPKIG00000001953	srp54	100	95.635	ENSCGRG00001009525	-	100	95.635	Cricetulus_griseus_chok1gshd
ENSPKIG00000001953	srp54	76	96.623	ENSCGRG00000009453	-	89	96.623	Cricetulus_griseus_crigri
ENSPKIG00000001953	srp54	100	97.222	ENSCSEG00000012392	srp54	100	97.222	Cynoglossus_semilaevis
ENSPKIG00000001953	srp54	100	97.817	ENSCVAG00000010395	srp54	100	97.817	Cyprinodon_variegatus
ENSPKIG00000001953	srp54	100	98.413	ENSDARG00000098367	srp54	100	98.413	Danio_rerio
ENSPKIG00000001953	srp54	100	95.635	ENSDNOG00000032525	SRP54	100	95.635	Dasypus_novemcinctus
ENSPKIG00000001953	srp54	89	80.531	ENSDORG00000005159	-	98	80.531	Dipodomys_ordii
ENSPKIG00000001953	srp54	96	79.588	FBgn0010747	Srp54k	98	79.116	Drosophila_melanogaster
ENSPKIG00000001953	srp54	83	56.220	ENSETEG00000012102	-	99	56.220	Echinops_telfairi
ENSPKIG00000001953	srp54	100	94.444	ENSETEG00000016307	-	100	94.444	Echinops_telfairi
ENSPKIG00000001953	srp54	100	88.690	ENSEBUG00000009437	-	100	88.690	Eptatretus_burgeri
ENSPKIG00000001953	srp54	100	95.635	ENSEASG00005002057	SRP54	100	95.635	Equus_asinus_asinus
ENSPKIG00000001953	srp54	99	95.382	ENSECAG00000018042	SRP54	98	95.382	Equus_caballus
ENSPKIG00000001953	srp54	100	79.762	ENSEEUG00000001511	SRP54	100	79.762	Erinaceus_europaeus
ENSPKIG00000001953	srp54	100	97.817	ENSELUG00000003395	srp54	100	97.817	Esox_lucius
ENSPKIG00000001953	srp54	100	95.437	ENSFCAG00000032033	SRP54	100	95.437	Felis_catus
ENSPKIG00000001953	srp54	100	95.238	ENSFALG00000005995	SRP54	100	95.238	Ficedula_albicollis
ENSPKIG00000001953	srp54	100	95.635	ENSFDAG00000016767	SRP54	100	95.635	Fukomys_damarensis
ENSPKIG00000001953	srp54	100	97.817	ENSFHEG00000004263	srp54	100	97.817	Fundulus_heteroclitus
ENSPKIG00000001953	srp54	95	92.469	ENSGMOG00000011391	srp54	100	92.469	Gadus_morhua
ENSPKIG00000001953	srp54	100	95.238	ENSGALG00000023135	SRP54	100	95.238	Gallus_gallus
ENSPKIG00000001953	srp54	100	98.016	ENSGAFG00000011586	srp54	100	98.016	Gambusia_affinis
ENSPKIG00000001953	srp54	100	97.421	ENSGACG00000004181	srp54	100	97.421	Gasterosteus_aculeatus
ENSPKIG00000001953	srp54	100	95.635	ENSGAGG00000014766	SRP54	100	95.635	Gopherus_agassizii
ENSPKIG00000001953	srp54	100	95.635	ENSGGOG00000002926	SRP54	100	95.635	Gorilla_gorilla
ENSPKIG00000001953	srp54	100	97.619	ENSHBUG00000005678	srp54	100	97.619	Haplochromis_burtoni
ENSPKIG00000001953	srp54	100	95.635	ENSHGLG00000002850	SRP54	100	95.635	Heterocephalus_glaber_female
ENSPKIG00000001953	srp54	100	95.635	ENSHGLG00100005263	SRP54	100	95.635	Heterocephalus_glaber_male
ENSPKIG00000001953	srp54	100	66.535	ENSHGLG00100007281	-	100	66.535	Heterocephalus_glaber_male
ENSPKIG00000001953	srp54	100	96.032	ENSHCOG00000021127	srp54	100	96.032	Hippocampus_comes
ENSPKIG00000001953	srp54	100	98.016	ENSIPUG00000001420	srp54	100	98.016	Ictalurus_punctatus
ENSPKIG00000001953	srp54	100	95.635	ENSSTOG00000016023	SRP54	100	95.635	Ictidomys_tridecemlineatus
ENSPKIG00000001953	srp54	100	90.675	ENSJJAG00000013417	-	100	90.675	Jaculus_jaculus
ENSPKIG00000001953	srp54	87	73.864	ENSJJAG00000016404	-	100	73.864	Jaculus_jaculus
ENSPKIG00000001953	srp54	100	97.421	ENSKMAG00000007707	srp54	100	97.421	Kryptolebias_marmoratus
ENSPKIG00000001953	srp54	100	97.817	ENSLBEG00000021122	srp54	100	97.817	Labrus_bergylta
ENSPKIG00000001953	srp54	100	97.817	ENSLBEG00000018690	srp54	100	97.817	Labrus_bergylta
ENSPKIG00000001953	srp54	100	96.032	ENSLACG00000017890	SRP54	100	96.032	Latimeria_chalumnae
ENSPKIG00000001953	srp54	100	97.817	ENSLOCG00000009440	srp54	100	97.817	Lepisosteus_oculatus
ENSPKIG00000001953	srp54	100	95.635	ENSLAFG00000012007	SRP54	100	95.635	Loxodonta_africana
ENSPKIG00000001953	srp54	100	95.635	ENSMFAG00000044371	SRP54	100	95.635	Macaca_fascicularis
ENSPKIG00000001953	srp54	100	95.635	ENSMMUG00000015073	FAM177A1	100	95.635	Macaca_mulatta
ENSPKIG00000001953	srp54	100	95.635	ENSMNEG00000006947	SRP54	100	95.635	Macaca_nemestrina
ENSPKIG00000001953	srp54	100	95.635	ENSMLEG00000042251	SRP54	100	95.635	Mandrillus_leucophaeus
ENSPKIG00000001953	srp54	100	97.619	ENSMAMG00000004803	srp54	100	97.619	Mastacembelus_armatus
ENSPKIG00000001953	srp54	100	97.619	ENSMZEG00005027528	srp54	100	97.619	Maylandia_zebra
ENSPKIG00000001953	srp54	100	90.909	ENSMGAG00000012481	SRP54	100	90.909	Meleagris_gallopavo
ENSPKIG00000001953	srp54	100	95.833	ENSMAUG00000014447	-	100	95.833	Mesocricetus_auratus
ENSPKIG00000001953	srp54	100	95.635	ENSMICG00000010270	SRP54	100	95.635	Microcebus_murinus
ENSPKIG00000001953	srp54	87	95.909	ENSMOCG00000000948	-	100	95.909	Microtus_ochrogaster
ENSPKIG00000001953	srp54	90	95.154	ENSMMOG00000020303	srp54	99	95.154	Mola_mola
ENSPKIG00000001953	srp54	100	95.635	ENSMODG00000012925	-	100	95.635	Monodelphis_domestica
ENSPKIG00000001953	srp54	100	95.635	ENSMODG00000023150	-	100	95.635	Monodelphis_domestica
ENSPKIG00000001953	srp54	89	96.205	ENSMALG00000009163	srp54	99	96.205	Monopterus_albus
ENSPKIG00000001953	srp54	100	95.833	MGP_CAROLIEiJ_G0017754	-	100	95.833	Mus_caroli
ENSPKIG00000001953	srp54	100	95.040	ENSMUSG00000079108	Srp54c	100	95.040	Mus_musculus
ENSPKIG00000001953	srp54	100	95.833	ENSMUSG00000073079	Srp54a	100	95.833	Mus_musculus
ENSPKIG00000001953	srp54	100	95.833	ENSMUSG00000112449	Srp54b	100	95.833	Mus_musculus
ENSPKIG00000001953	srp54	100	95.833	MGP_PahariEiJ_G0029510	-	100	95.833	Mus_pahari
ENSPKIG00000001953	srp54	100	95.635	ENSMPUG00000016302	SRP54	100	95.635	Mustela_putorius_furo
ENSPKIG00000001953	srp54	100	95.040	ENSMLUG00000008958	SRP54	100	95.040	Myotis_lucifugus
ENSPKIG00000001953	srp54	100	86.508	ENSNGAG00000019806	-	100	86.508	Nannospalax_galili
ENSPKIG00000001953	srp54	87	97.727	ENSNBRG00000006000	srp54	100	97.727	Neolamprologus_brichardi
ENSPKIG00000001953	srp54	100	95.635	ENSNLEG00000003496	SRP54	100	95.635	Nomascus_leucogenys
ENSPKIG00000001953	srp54	67	96.429	ENSMEUG00000000138	-	76	96.429	Notamacropus_eugenii
ENSPKIG00000001953	srp54	58	95.082	ENSOPRG00000014502	-	60	95.082	Ochotona_princeps
ENSPKIG00000001953	srp54	100	95.635	ENSODEG00000004865	SRP54	100	95.635	Octodon_degus
ENSPKIG00000001953	srp54	100	97.619	ENSONIG00000011768	srp54	100	97.619	Oreochromis_niloticus
ENSPKIG00000001953	srp54	100	95.635	ENSOANG00000014051	SRP54	100	95.635	Ornithorhynchus_anatinus
ENSPKIG00000001953	srp54	100	95.040	ENSOCUG00000007838	SRP54	100	95.040	Oryctolagus_cuniculus
ENSPKIG00000001953	srp54	100	97.817	ENSORLG00000010027	srp54	100	97.817	Oryzias_latipes
ENSPKIG00000001953	srp54	100	97.817	ENSORLG00020001878	srp54	100	97.817	Oryzias_latipes_hni
ENSPKIG00000001953	srp54	100	97.817	ENSORLG00015021866	srp54	100	97.817	Oryzias_latipes_hsok
ENSPKIG00000001953	srp54	100	97.619	ENSOMEG00000020952	srp54	100	97.619	Oryzias_melastigma
ENSPKIG00000001953	srp54	100	95.635	ENSOGAG00000012188	SRP54	100	95.635	Otolemur_garnettii
ENSPKIG00000001953	srp54	100	95.635	ENSOARG00000007160	SRP54	100	95.635	Ovis_aries
ENSPKIG00000001953	srp54	100	95.635	ENSPPAG00000017434	SRP54	100	95.635	Pan_paniscus
ENSPKIG00000001953	srp54	100	94.643	ENSPPRG00000014047	SRP54	100	94.643	Panthera_pardus
ENSPKIG00000001953	srp54	100	95.437	ENSPTIG00000000744	SRP54	96	95.437	Panthera_tigris_altaica
ENSPKIG00000001953	srp54	100	95.635	ENSPTRG00000006259	FAM177A1	100	95.635	Pan_troglodytes
ENSPKIG00000001953	srp54	100	95.635	ENSPANG00000023853	SRP54	100	95.635	Papio_anubis
ENSPKIG00000001953	srp54	100	95.833	ENSPSIG00000006476	SRP54	100	95.833	Pelodiscus_sinensis
ENSPKIG00000001953	srp54	91	95.186	ENSPMGG00000004127	srp54	99	95.186	Periophthalmus_magnuspinnatus
ENSPKIG00000001953	srp54	100	83.929	ENSPEMG00000019634	-	100	83.929	Peromyscus_maniculatus_bairdii
ENSPKIG00000001953	srp54	100	90.675	ENSPMAG00000006078	-	100	90.675	Petromyzon_marinus
ENSPKIG00000001953	srp54	100	95.635	ENSPCIG00000016175	SRP54	100	95.635	Phascolarctos_cinereus
ENSPKIG00000001953	srp54	100	98.016	ENSPFOG00000008870	srp54	100	98.016	Poecilia_formosa
ENSPKIG00000001953	srp54	100	98.016	ENSPLAG00000009889	srp54	100	98.016	Poecilia_latipinna
ENSPKIG00000001953	srp54	100	98.016	ENSPMEG00000008601	srp54	100	98.016	Poecilia_mexicana
ENSPKIG00000001953	srp54	100	98.016	ENSPREG00000004505	srp54	100	98.016	Poecilia_reticulata
ENSPKIG00000001953	srp54	100	90.873	ENSPPYG00000005739	SRP54	100	90.873	Pongo_abelii
ENSPKIG00000001953	srp54	100	92.063	ENSPCAG00000006268	SRP54	100	92.063	Procavia_capensis
ENSPKIG00000001953	srp54	100	93.663	ENSPCOG00000022473	SRP54	100	93.663	Propithecus_coquereli
ENSPKIG00000001953	srp54	63	96.413	ENSPVAG00000010056	SRP54	82	96.413	Pteropus_vampyrus
ENSPKIG00000001953	srp54	100	97.619	ENSPNYG00000009717	srp54	100	97.619	Pundamilia_nyererei
ENSPKIG00000001953	srp54	100	98.214	ENSPNAG00000008544	srp54	100	98.214	Pygocentrus_nattereri
ENSPKIG00000001953	srp54	100	95.635	ENSRNOG00000032776	Srp54a	100	95.635	Rattus_norvegicus
ENSPKIG00000001953	srp54	100	95.635	ENSRROG00000041292	SRP54	100	95.635	Rhinopithecus_roxellana
ENSPKIG00000001953	srp54	86	51.247	YPR088C	SRP54	95	46.935	Saccharomyces_cerevisiae
ENSPKIG00000001953	srp54	94	95.570	ENSSBOG00000035145	SRP54	100	95.570	Saimiri_boliviensis_boliviensis
ENSPKIG00000001953	srp54	68	95.044	ENSSHAG00000000671	SRP54	100	95.044	Sarcophilus_harrisii
ENSPKIG00000001953	srp54	100	99.206	ENSSFOG00015013920	srp54	100	99.206	Scleropages_formosus
ENSPKIG00000001953	srp54	100	91.948	ENSSMAG00000002441	srp54	100	91.948	Scophthalmus_maximus
ENSPKIG00000001953	srp54	100	97.222	ENSSDUG00000018586	srp54	100	97.222	Seriola_dumerili
ENSPKIG00000001953	srp54	100	97.421	ENSSLDG00000010476	srp54	100	97.421	Seriola_lalandi_dorsalis
ENSPKIG00000001953	srp54	100	95.635	ENSSARG00000002744	SRP54	100	95.635	Sorex_araneus
ENSPKIG00000001953	srp54	100	95.635	ENSSPUG00000013101	SRP54	100	95.635	Sphenodon_punctatus
ENSPKIG00000001953	srp54	100	97.817	ENSSPAG00000002354	srp54	100	97.817	Stegastes_partitus
ENSPKIG00000001953	srp54	100	95.635	ENSSSCG00000001955	SRP54	100	95.635	Sus_scrofa
ENSPKIG00000001953	srp54	94	94.937	ENSTGUG00000011945	-	95	94.937	Taeniopygia_guttata
ENSPKIG00000001953	srp54	100	97.222	ENSTRUG00000007057	srp54	100	97.222	Takifugu_rubripes
ENSPKIG00000001953	srp54	100	96.627	ENSTNIG00000002589	srp54	100	96.627	Tetraodon_nigroviridis
ENSPKIG00000001953	srp54	89	87.025	ENSTBEG00000011409	SRP54	100	87.025	Tupaia_belangeri
ENSPKIG00000001953	srp54	100	86.508	ENSTTRG00000000928	SRP54	100	86.508	Tursiops_truncatus
ENSPKIG00000001953	srp54	52	96.183	ENSUAMG00000012385	SRP54	100	96.183	Ursus_americanus
ENSPKIG00000001953	srp54	100	95.635	ENSUMAG00000011234	SRP54	100	95.635	Ursus_maritimus
ENSPKIG00000001953	srp54	94	95.148	ENSVPAG00000005668	SRP54	100	95.148	Vicugna_pacos
ENSPKIG00000001953	srp54	100	95.635	ENSVVUG00000019962	SRP54	100	95.635	Vulpes_vulpes
ENSPKIG00000001953	srp54	100	81.460	ENSXETG00000012290	srp54	100	81.460	Xenopus_tropicalis
ENSPKIG00000001953	srp54	88	97.968	ENSXCOG00000004658	srp54	96	97.968	Xiphophorus_couchianus
ENSPKIG00000001953	srp54	100	98.016	ENSXMAG00000018315	srp54	100	98.016	Xiphophorus_maculatus