EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000002254 (Gene tree)
Gene ID: 111860055
Gene Symbol: SNAI2
Alias: -
Full Name: snail family transcriptional repressor 2
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 3192 bases
Position: chrPGUA01000397.1:107822-111013
Accession: 111860055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000015605	zf-C2H2	PF00096.26	9.2e-27	1	5
ENSPKIP00000015605	zf-C2H2	PF00096.26	9.2e-27	2	5
ENSPKIP00000015605	zf-C2H2	PF00096.26	9.2e-27	3	5
ENSPKIP00000015605	zf-C2H2	PF00096.26	9.2e-27	4	5
ENSPKIP00000015605	zf-C2H2	PF00096.26	9.2e-27	5	5
ENSPKIP00000015593	zf-C2H2	PF00096.26	1.9e-26	1	5
ENSPKIP00000015593	zf-C2H2	PF00096.26	1.9e-26	2	5
ENSPKIP00000015593	zf-C2H2	PF00096.26	1.9e-26	3	5
ENSPKIP00000015593	zf-C2H2	PF00096.26	1.9e-26	4	5
ENSPKIP00000015593	zf-C2H2	PF00096.26	1.9e-26	5	5
ENSPKIP00000015605	zf-met	PF12874.7	1.4e-05	1	1
ENSPKIP00000015593	zf-met	PF12874.7	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000040062	SNAI2-201	2454	-	ENSPKIP00000015593	268 (aa)	XP_023699122	UPI000CD6113E
ENSPKIT00000040074	SNAI2-202	726	-	ENSPKIP00000015605	241 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000002254's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki04520	Adherens junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000002254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000002254	SNAI2	58	36.220	ENSPKIG00000018202	-	60	36.220
ENSPKIG00000002254	SNAI2	79	39.200	ENSPKIG00000015951	-	74	39.200
ENSPKIG00000002254	SNAI2	77	39.552	ENSPKIG00000009111	-	89	39.552
ENSPKIG00000002254	SNAI2	61	41.481	ENSPKIG00000006616	-	57	41.481
ENSPKIG00000002254	SNAI2	97	38.776	ENSPKIG00000012069	-	98	40.260
ENSPKIG00000002254	SNAI2	99	41.429	ENSPKIG00000020085	scrt1a	50	57.554
ENSPKIG00000002254	SNAI2	99	55.515	ENSPKIG00000006393	snai1a	98	56.202
ENSPKIG00000002254	SNAI2	98	42.593	ENSPKIG00000022303	SCRT1	95	41.418
ENSPKIG00000002254	SNAI2	60	41.441	ENSPKIG00000015492	prdm5	57	41.441
ENSPKIG00000002254	SNAI2	69	41.053	ENSPKIG00000017781	-	62	40.476
ENSPKIG00000002254	SNAI2	70	40.741	ENSPKIG00000006563	-	97	40.741
ENSPKIG00000002254	SNAI2	59	52.542	ENSPKIG00000010773	-	90	52.542
ENSPKIG00000002254	SNAI2	54	37.410	ENSPKIG00000014203	ZIC2	55	37.349
ENSPKIG00000002254	SNAI2	99	55.363	ENSPKIG00000007872	SNAI3	99	54.671
ENSPKIG00000002254	SNAI2	60	34.091	ENSPKIG00000008355	-	59	34.091
ENSPKIG00000002254	SNAI2	83	40.000	ENSPKIG00000002670	-	69	39.259
ENSPKIG00000002254	SNAI2	65	44.048	ENSPKIG00000012290	-	100	44.048
ENSPKIG00000002254	SNAI2	57	34.906	ENSPKIG00000015139	znf319b	76	34.906
ENSPKIG00000002254	SNAI2	90	47.297	ENSPKIG00000018168	znf236	60	51.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000002254	SNAI2	100	84.328	ENSG00000019549	SNAI2	100	84.328	Homo_sapiens
ENSPKIG00000002254	SNAI2	99	48.464	ENSG00000185669	SNAI3	99	49.315	Homo_sapiens
ENSPKIG00000002254	SNAI2	100	85.821	ENSAMEG00000009606	SNAI2	100	85.821	Ailuropoda_melanoleuca
ENSPKIG00000002254	SNAI2	100	84.328	ENSANAG00000021163	SNAI2	100	84.328	Aotus_nancymaae
ENSPKIG00000002254	SNAI2	99	49.338	ENSANAG00000032748	SNAI3	99	48.630	Aotus_nancymaae
ENSPKIG00000002254	SNAI2	100	82.836	ENSBTAG00000013227	SNAI2	100	82.836	Bos_taurus
ENSPKIG00000002254	SNAI2	99	46.512	ENSBTAG00000017528	SNAI3	99	46.780	Bos_taurus
ENSPKIG00000002254	SNAI2	100	84.328	ENSCJAG00000013499	SNAI2	100	84.328	Callithrix_jacchus
ENSPKIG00000002254	SNAI2	99	47.260	ENSCAFG00000029458	SNAI3	99	46.392	Canis_familiaris
ENSPKIG00000002254	SNAI2	100	85.075	ENSCAFG00000006638	SNAI2	100	85.075	Canis_familiaris
ENSPKIG00000002254	SNAI2	100	85.075	ENSCAFG00020015384	SNAI2	100	85.075	Canis_lupus_dingo
ENSPKIG00000002254	SNAI2	99	47.603	ENSCAFG00020004719	SNAI3	99	46.735	Canis_lupus_dingo
ENSPKIG00000002254	SNAI2	99	46.575	ENSCHIG00000018087	SNAI3	99	46.048	Capra_hircus
ENSPKIG00000002254	SNAI2	100	82.463	ENSCHIG00000024410	SNAI2	100	82.463	Capra_hircus
ENSPKIG00000002254	SNAI2	90	84.647	ENSTSYG00000030892	SNAI2	90	84.647	Carlito_syrichta
ENSPKIG00000002254	SNAI2	83	85.650	ENSCAPG00000013078	SNAI2	100	85.650	Cavia_aperea
ENSPKIG00000002254	SNAI2	100	84.328	ENSCCAG00000024100	SNAI2	100	84.328	Cebus_capucinus
ENSPKIG00000002254	SNAI2	100	84.328	ENSCATG00000028656	SNAI2	100	84.328	Cercocebus_atys
ENSPKIG00000002254	SNAI2	99	50.685	ENSCATG00000031714	SNAI3	99	48.649	Cercocebus_atys
ENSPKIG00000002254	SNAI2	100	85.448	ENSCLAG00000011797	SNAI2	100	85.448	Chinchilla_lanigera
ENSPKIG00000002254	SNAI2	100	84.328	ENSCSAG00000014787	SNAI2	100	84.328	Chlorocebus_sabaeus
ENSPKIG00000002254	SNAI2	83	62.000	ENSCSAG00000003047	SNAI3	65	62.000	Chlorocebus_sabaeus
ENSPKIG00000002254	SNAI2	100	86.940	ENSCPBG00000020255	SNAI2	100	86.940	Chrysemys_picta_bellii
ENSPKIG00000002254	SNAI2	99	52.218	ENSCPBG00000023474	SNAI3	99	50.853	Chrysemys_picta_bellii
ENSPKIG00000002254	SNAI2	76	52.174	ENSCSAVG00000009819	-	79	57.595	Ciona_savignyi
ENSPKIG00000002254	SNAI2	83	62.000	ENSCANG00000031124	SNAI3	58	62.000	Colobus_angolensis_palliatus
ENSPKIG00000002254	SNAI2	100	84.328	ENSCANG00000029656	SNAI2	100	84.328	Colobus_angolensis_palliatus
ENSPKIG00000002254	SNAI2	100	84.328	ENSCGRG00001013674	Snai2	100	84.328	Cricetulus_griseus_chok1gshd
ENSPKIG00000002254	SNAI2	99	48.601	ENSCGRG00001011389	Snai3	99	46.552	Cricetulus_griseus_chok1gshd
ENSPKIG00000002254	SNAI2	99	48.601	ENSCGRG00000014932	Snai3	99	46.552	Cricetulus_griseus_crigri
ENSPKIG00000002254	SNAI2	100	84.328	ENSCGRG00000012119	Snai2	100	84.328	Cricetulus_griseus_crigri
ENSPKIG00000002254	SNAI2	78	36.150	ENSDNOG00000035204	-	100	36.150	Dasypus_novemcinctus
ENSPKIG00000002254	SNAI2	100	82.836	ENSDORG00000029620	Snai2	100	82.463	Dipodomys_ordii
ENSPKIG00000002254	SNAI2	57	77.536	ENSEASG00005000614	SNAI3	63	60.500	Equus_asinus_asinus
ENSPKIG00000002254	SNAI2	99	47.351	ENSECAG00000012131	SNAI3	99	48.789	Equus_caballus
ENSPKIG00000002254	SNAI2	99	46.237	ENSEEUG00000000841	SNAI3	99	42.857	Erinaceus_europaeus
ENSPKIG00000002254	SNAI2	99	57.609	ENSELUG00000018742	-	99	55.872	Esox_lucius
ENSPKIG00000002254	SNAI2	100	86.567	ENSELUG00000021795	SNAI2	79	86.567	Esox_lucius
ENSPKIG00000002254	SNAI2	99	44.523	ENSFCAG00000043885	SNAI3	99	44.128	Felis_catus
ENSPKIG00000002254	SNAI2	88	67.111	ENSFALG00000012974	-	98	66.071	Ficedula_albicollis
ENSPKIG00000002254	SNAI2	100	85.075	ENSFDAG00000016958	SNAI2	100	85.075	Fukomys_damarensis
ENSPKIG00000002254	SNAI2	100	86.940	ENSGAGG00000000426	SNAI2	100	86.940	Gopherus_agassizii
ENSPKIG00000002254	SNAI2	99	53.177	ENSGAGG00000023571	SNAI3	99	51.903	Gopherus_agassizii
ENSPKIG00000002254	SNAI2	100	84.328	ENSGGOG00000000959	SNAI2	100	84.328	Gorilla_gorilla
ENSPKIG00000002254	SNAI2	99	48.966	ENSGGOG00000012559	SNAI3	99	48.966	Gorilla_gorilla
ENSPKIG00000002254	SNAI2	100	76.863	ENSHCOG00000019435	SNAI2	100	76.952	Hippocampus_comes
ENSPKIG00000002254	SNAI2	100	74.621	ENSIPUG00000000131	snai2	100	74.621	Ictalurus_punctatus
ENSPKIG00000002254	SNAI2	100	85.448	ENSSTOG00000028743	SNAI2	100	85.448	Ictidomys_tridecemlineatus
ENSPKIG00000002254	SNAI2	99	48.805	ENSJJAG00000019934	Snai3	99	50.169	Jaculus_jaculus
ENSPKIG00000002254	SNAI2	58	85.000	ENSLOCG00000004887	SNAI3	97	79.874	Lepisosteus_oculatus
ENSPKIG00000002254	SNAI2	100	91.418	ENSLOCG00000005992	SNAI2	100	91.418	Lepisosteus_oculatus
ENSPKIG00000002254	SNAI2	100	85.821	ENSLAFG00000009299	SNAI2	100	85.821	Loxodonta_africana
ENSPKIG00000002254	SNAI2	99	55.720	ENSLAFG00000005117	SNAI3	99	55.720	Loxodonta_africana
ENSPKIG00000002254	SNAI2	100	84.328	ENSMFAG00000046061	SNAI2	100	84.328	Macaca_fascicularis
ENSPKIG00000002254	SNAI2	99	50.685	ENSMFAG00000032064	SNAI3	99	49.655	Macaca_fascicularis
ENSPKIG00000002254	SNAI2	100	84.328	ENSMMUG00000016195	SNAI2	100	84.328	Macaca_mulatta
ENSPKIG00000002254	SNAI2	99	50.685	ENSMMUG00000008716	SNAI3	99	49.655	Macaca_mulatta
ENSPKIG00000002254	SNAI2	100	84.328	ENSMNEG00000034216	SNAI2	100	84.328	Macaca_nemestrina
ENSPKIG00000002254	SNAI2	99	51.027	ENSMNEG00000045515	SNAI3	99	49.658	Macaca_nemestrina
ENSPKIG00000002254	SNAI2	100	84.328	ENSMLEG00000034407	SNAI2	100	84.328	Mandrillus_leucophaeus
ENSPKIG00000002254	SNAI2	83	62.000	ENSMLEG00000033191	SNAI3	65	62.000	Mandrillus_leucophaeus
ENSPKIG00000002254	SNAI2	100	83.955	ENSMAUG00000008119	Snai2	100	83.955	Mesocricetus_auratus
ENSPKIG00000002254	SNAI2	99	47.038	ENSMAUG00000001685	Snai3	99	47.038	Mesocricetus_auratus
ENSPKIG00000002254	SNAI2	100	84.701	ENSMOCG00000006622	Snai2	100	84.701	Microtus_ochrogaster
ENSPKIG00000002254	SNAI2	100	86.567	ENSMODG00000010173	SNAI2	100	86.567	Monodelphis_domestica
ENSPKIG00000002254	SNAI2	100	85.130	MGP_CAROLIEiJ_G0020483	Snai2	100	82.156	Mus_caroli
ENSPKIG00000002254	SNAI2	100	85.502	ENSMUSG00000022676	Snai2	100	82.528	Mus_musculus
ENSPKIG00000002254	SNAI2	100	85.130	MGP_PahariEiJ_G0016188	Snai2	100	82.156	Mus_pahari
ENSPKIG00000002254	SNAI2	99	46.735	MGP_PahariEiJ_G0023260	Snai3	99	45.424	Mus_pahari
ENSPKIG00000002254	SNAI2	100	85.502	MGP_SPRETEiJ_G0021379	Snai2	100	82.528	Mus_spretus
ENSPKIG00000002254	SNAI2	100	85.821	ENSMPUG00000010793	SNAI2	100	85.821	Mustela_putorius_furo
ENSPKIG00000002254	SNAI2	99	48.797	ENSMPUG00000008104	SNAI3	99	47.682	Mustela_putorius_furo
ENSPKIG00000002254	SNAI2	100	83.582	ENSMLUG00000001086	SNAI2	100	83.582	Myotis_lucifugus
ENSPKIG00000002254	SNAI2	99	48.311	ENSNGAG00000023039	Snai3	99	46.918	Nannospalax_galili
ENSPKIG00000002254	SNAI2	99	50.342	ENSNLEG00000000595	SNAI3	99	49.658	Nomascus_leucogenys
ENSPKIG00000002254	SNAI2	100	84.328	ENSNLEG00000013421	SNAI2	100	84.328	Nomascus_leucogenys
ENSPKIG00000002254	SNAI2	97	86.973	ENSMEUG00000009510	SNAI2	100	86.973	Notamacropus_eugenii
ENSPKIG00000002254	SNAI2	100	85.821	ENSOANG00000007267	SNAI2	100	85.821	Ornithorhynchus_anatinus
ENSPKIG00000002254	SNAI2	99	50.519	ENSOGAG00000000419	SNAI3	99	49.306	Otolemur_garnettii
ENSPKIG00000002254	SNAI2	100	82.463	ENSOARG00000013030	SNAI2	100	82.463	Ovis_aries
ENSPKIG00000002254	SNAI2	99	48.485	ENSPPAG00000043301	SNAI3	99	47.635	Pan_paniscus
ENSPKIG00000002254	SNAI2	100	84.328	ENSPPAG00000015662	SNAI2	100	84.328	Pan_paniscus
ENSPKIG00000002254	SNAI2	100	86.194	ENSPPRG00000012562	-	100	86.194	Panthera_pardus
ENSPKIG00000002254	SNAI2	99	46.350	ENSPPRG00000008511	SNAI3	99	45.956	Panthera_pardus
ENSPKIG00000002254	SNAI2	90	86.364	ENSPTIG00000007593	SNAI2	77	86.364	Panthera_tigris_altaica
ENSPKIG00000002254	SNAI2	99	49.158	ENSPTRG00000008460	SNAI3	99	48.000	Pan_troglodytes
ENSPKIG00000002254	SNAI2	100	84.328	ENSPTRG00000020235	SNAI2	100	84.328	Pan_troglodytes
ENSPKIG00000002254	SNAI2	99	50.345	ENSPANG00000000509	SNAI3	99	48.986	Papio_anubis
ENSPKIG00000002254	SNAI2	100	84.328	ENSPANG00000017540	SNAI2	100	84.328	Papio_anubis
ENSPKIG00000002254	SNAI2	74	67.204	ENSPSIG00000004262	SNAI3	56	80.986	Pelodiscus_sinensis
ENSPKIG00000002254	SNAI2	100	86.567	ENSPSIG00000016395	SNAI2	100	86.567	Pelodiscus_sinensis
ENSPKIG00000002254	SNAI2	100	84.328	ENSPMGG00000013179	SNAI2	100	84.328	Periophthalmus_magnuspinnatus
ENSPKIG00000002254	SNAI2	100	83.955	ENSPEMG00000011739	Snai2	100	83.955	Peromyscus_maniculatus_bairdii
ENSPKIG00000002254	SNAI2	100	86.940	ENSPCIG00000025156	SNAI2	100	86.940	Phascolarctos_cinereus
ENSPKIG00000002254	SNAI2	90	85.124	ENSPREG00000008528	SNAI2	86	85.124	Poecilia_reticulata
ENSPKIG00000002254	SNAI2	99	49.158	ENSPPYG00000007643	SNAI3	99	49.147	Pongo_abelii
ENSPKIG00000002254	SNAI2	100	84.328	ENSPPYG00000018578	SNAI2	100	84.328	Pongo_abelii
ENSPKIG00000002254	SNAI2	100	85.448	ENSPCOG00000015656	SNAI2	100	85.448	Propithecus_coquereli
ENSPKIG00000002254	SNAI2	100	85.075	ENSPVAG00000009457	SNAI2	100	85.075	Pteropus_vampyrus
ENSPKIG00000002254	SNAI2	99	46.801	ENSRNOG00000013586	Snai3	99	45.946	Rattus_norvegicus
ENSPKIG00000002254	SNAI2	100	84.328	ENSRBIG00000041133	SNAI2	100	84.328	Rhinopithecus_bieti
ENSPKIG00000002254	SNAI2	99	49.498	ENSRBIG00000025770	SNAI3	99	50.000	Rhinopithecus_bieti
ENSPKIG00000002254	SNAI2	100	84.328	ENSRROG00000032273	SNAI2	100	84.328	Rhinopithecus_roxellana
ENSPKIG00000002254	SNAI2	99	49.498	ENSRROG00000032757	SNAI3	99	49.315	Rhinopithecus_roxellana
ENSPKIG00000002254	SNAI2	100	84.328	ENSSBOG00000035774	SNAI2	100	84.328	Saimiri_boliviensis_boliviensis
ENSPKIG00000002254	SNAI2	100	86.940	ENSSHAG00000004205	SNAI2	100	86.940	Sarcophilus_harrisii
ENSPKIG00000002254	SNAI2	100	94.444	ENSSFOG00015018025	SNAI2	100	94.444	Scleropages_formosus
ENSPKIG00000002254	SNAI2	99	50.498	ENSSFOG00015016115	snai3	93	51.495	Scleropages_formosus
ENSPKIG00000002254	SNAI2	100	86.567	ENSSPUG00000005427	-	100	86.567	Sphenodon_punctatus
ENSPKIG00000002254	SNAI2	100	84.328	ENSSSCG00000039568	SNAI2	100	84.328	Sus_scrofa
ENSPKIG00000002254	SNAI2	99	46.503	ENSTTRG00000006262	SNAI3	99	45.804	Tursiops_truncatus
ENSPKIG00000002254	SNAI2	85	86.900	ENSUAMG00000014942	SNAI2	99	86.900	Ursus_americanus
ENSPKIG00000002254	SNAI2	99	50.000	ENSUAMG00000020030	SNAI3	99	50.508	Ursus_americanus
ENSPKIG00000002254	SNAI2	98	85.171	ENSUMAG00000006525	SNAI2	100	85.171	Ursus_maritimus
ENSPKIG00000002254	SNAI2	100	85.448	ENSVVUG00000017625	SNAI2	100	85.448	Vulpes_vulpes
ENSPKIG00000002254	SNAI2	99	47.751	ENSVVUG00000003233	SNAI3	99	47.405	Vulpes_vulpes
ENSPKIG00000002254	SNAI2	100	84.701	ENSXETG00000024006	snai2	100	82.090	Xenopus_tropicalis