EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000002455 (Gene tree)
Gene ID: 111835287
Gene Symbol: tarbp2
Alias: -
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 5485 bases
Position: chrPGUA01000052.1:697732-703216
Accession: 111835287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000015945	dsrm	PF00035.26	3.4e-35	1	2
ENSPKIP00000015945	dsrm	PF00035.26	3.4e-35	2	2
ENSPKIP00000015928	dsrm	PF00035.26	3.8e-35	1	2
ENSPKIP00000015928	dsrm	PF00035.26	3.8e-35	2	2
ENSPKIP00000015945	DND1_DSRM	PF14709.7	4.5e-13	1	1
ENSPKIP00000015928	DND1_DSRM	PF14709.7	4.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000040407	-	2051	-	ENSPKIP00000015928	355 (aa)	XP_023651196	UPI000CD651DF
ENSPKIT00000040425	-	1044	-	ENSPKIP00000015945	347 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000002455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000002455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000002455	tarbp2	100	43.258	ENSPKIG00000022368	prkra	100	43.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000002455	tarbp2	100	65.940	ENSG00000139546	TARBP2	88	93.506	Homo_sapiens
ENSPKIG00000002455	tarbp2	100	79.775	ENSAPOG00000019892	tarbp2	100	80.337	Acanthochromis_polyacanthus
ENSPKIG00000002455	tarbp2	100	65.860	ENSAMEG00000012601	TARBP2	100	66.940	Ailuropoda_melanoleuca
ENSPKIG00000002455	tarbp2	100	77.247	ENSACIG00000016780	tarbp2	100	77.809	Amphilophus_citrinellus
ENSPKIG00000002455	tarbp2	100	79.494	ENSAOCG00000005201	tarbp2	100	80.056	Amphiprion_ocellaris
ENSPKIG00000002455	tarbp2	100	79.494	ENSAPEG00000008376	tarbp2	100	80.056	Amphiprion_percula
ENSPKIG00000002455	tarbp2	100	80.056	ENSATEG00000025012	tarbp2	100	80.618	Anabas_testudineus
ENSPKIG00000002455	tarbp2	100	69.315	ENSACAG00000001100	TARBP2	100	69.315	Anolis_carolinensis
ENSPKIG00000002455	tarbp2	100	67.030	ENSANAG00000034453	TARBP2	94	81.333	Aotus_nancymaae
ENSPKIG00000002455	tarbp2	95	78.852	ENSACLG00000018569	tarbp2	95	78.338	Astatotilapia_calliptera
ENSPKIG00000002455	tarbp2	100	82.535	ENSAMXG00000016665	tarbp2	100	82.303	Astyanax_mexicanus
ENSPKIG00000002455	tarbp2	100	66.667	ENSBTAG00000000435	TARBP2	100	67.030	Bos_taurus
ENSPKIG00000002455	tarbp2	100	67.030	ENSCJAG00000018668	TARBP2	100	67.030	Callithrix_jacchus
ENSPKIG00000002455	tarbp2	100	69.231	ENSCAFG00000006874	TARBP2	100	69.231	Canis_familiaris
ENSPKIG00000002455	tarbp2	100	66.033	ENSCAFG00020020735	TARBP2	100	68.406	Canis_lupus_dingo
ENSPKIG00000002455	tarbp2	100	64.894	ENSCHIG00000026017	TARBP2	100	65.946	Capra_hircus
ENSPKIG00000002455	tarbp2	100	68.120	ENSTSYG00000035683	TARBP2	94	81.333	Carlito_syrichta
ENSPKIG00000002455	tarbp2	61	71.163	ENSCAPG00000008981	TARBP2	96	71.163	Cavia_aperea
ENSPKIG00000002455	tarbp2	100	66.757	ENSCPOG00000001009	TARBP2	100	66.757	Cavia_porcellus
ENSPKIG00000002455	tarbp2	100	66.757	ENSCCAG00000033025	TARBP2	91	94.340	Cebus_capucinus
ENSPKIG00000002455	tarbp2	100	65.940	ENSCATG00000026344	TARBP2	94	80.000	Cercocebus_atys
ENSPKIG00000002455	tarbp2	100	67.030	ENSCLAG00000009175	TARBP2	100	67.030	Chinchilla_lanigera
ENSPKIG00000002455	tarbp2	100	67.213	ENSCSAG00000005479	TARBP2	100	66.940	Chlorocebus_sabaeus
ENSPKIG00000002455	tarbp2	100	69.529	ENSCPBG00000000654	TARBP2	100	71.681	Chrysemys_picta_bellii
ENSPKIG00000002455	tarbp2	100	65.123	ENSCANG00000040415	TARBP2	91	92.453	Colobus_angolensis_palliatus
ENSPKIG00000002455	tarbp2	100	67.123	ENSCGRG00001011856	TARBP2	100	67.486	Cricetulus_griseus_chok1gshd
ENSPKIG00000002455	tarbp2	100	67.123	ENSCGRG00000009088	TARBP2	100	70.370	Cricetulus_griseus_crigri
ENSPKIG00000002455	tarbp2	100	78.371	ENSCSEG00000010631	tarbp2	100	78.371	Cynoglossus_semilaevis
ENSPKIG00000002455	tarbp2	100	78.933	ENSCVAG00000009832	tarbp2	100	79.494	Cyprinodon_variegatus
ENSPKIG00000002455	tarbp2	100	78.492	ENSDARG00000070471	tarbp2	100	79.387	Danio_rerio
ENSPKIG00000002455	tarbp2	100	66.848	ENSDNOG00000002144	TARBP2	100	67.575	Dasypus_novemcinctus
ENSPKIG00000002455	tarbp2	68	67.355	ENSDORG00000001390	Tarbp2	98	67.355	Dipodomys_ordii
ENSPKIG00000002455	tarbp2	86	83.838	ENSETEG00000002458	TARBP2	82	83.838	Echinops_telfairi
ENSPKIG00000002455	tarbp2	95	59.517	ENSEBUG00000002377	tarbp2	98	60.423	Eptatretus_burgeri
ENSPKIG00000002455	tarbp2	100	65.940	ENSEASG00005010030	TARBP2	100	67.030	Equus_asinus_asinus
ENSPKIG00000002455	tarbp2	100	69.209	ENSECAG00000011695	TARBP2	94	81.333	Equus_caballus
ENSPKIG00000002455	tarbp2	85	62.821	ENSEEUG00000001128	-	99	63.091	Erinaceus_europaeus
ENSPKIG00000002455	tarbp2	100	80.112	ENSELUG00000010642	tarbp2	100	80.726	Esox_lucius
ENSPKIG00000002455	tarbp2	100	65.591	ENSFCAG00000007757	TARBP2	100	66.393	Felis_catus
ENSPKIG00000002455	tarbp2	100	67.030	ENSFDAG00000011932	TARBP2	100	69.672	Fukomys_damarensis
ENSPKIG00000002455	tarbp2	94	80.061	ENSFHEG00000016118	tarbp2	100	80.061	Fundulus_heteroclitus
ENSPKIG00000002455	tarbp2	100	75.419	ENSGMOG00000001290	tarbp2	100	75.978	Gadus_morhua
ENSPKIG00000002455	tarbp2	65	74.107	ENSGALG00000038939	-	85	74.107	Gallus_gallus
ENSPKIG00000002455	tarbp2	100	79.494	ENSGAFG00000013341	tarbp2	100	79.494	Gambusia_affinis
ENSPKIG00000002455	tarbp2	100	77.654	ENSGACG00000006645	tarbp2	100	78.830	Gasterosteus_aculeatus
ENSPKIG00000002455	tarbp2	100	70.360	ENSGAGG00000021169	TARBP2	100	70.083	Gopherus_agassizii
ENSPKIG00000002455	tarbp2	100	65.761	ENSGGOG00000012637	TARBP2	94	81.333	Gorilla_gorilla
ENSPKIG00000002455	tarbp2	100	76.685	ENSHBUG00000018639	tarbp2	100	77.247	Haplochromis_burtoni
ENSPKIG00000002455	tarbp2	100	66.757	ENSHGLG00000001284	TARBP2	100	66.757	Heterocephalus_glaber_female
ENSPKIG00000002455	tarbp2	100	66.757	ENSHGLG00100011274	TARBP2	100	66.757	Heterocephalus_glaber_male
ENSPKIG00000002455	tarbp2	100	75.630	ENSHCOG00000001027	tarbp2	100	75.630	Hippocampus_comes
ENSPKIG00000002455	tarbp2	100	81.006	ENSIPUG00000023701	tarbp2	100	81.006	Ictalurus_punctatus
ENSPKIG00000002455	tarbp2	100	66.485	ENSSTOG00000003678	TARBP2	100	69.672	Ictidomys_tridecemlineatus
ENSPKIG00000002455	tarbp2	100	79.775	ENSKMAG00000012142	tarbp2	100	79.775	Kryptolebias_marmoratus
ENSPKIG00000002455	tarbp2	100	79.552	ENSLBEG00000015027	tarbp2	100	78.082	Labrus_bergylta
ENSPKIG00000002455	tarbp2	95	63.664	ENSLACG00000007087	TARBP2	95	64.565	Latimeria_chalumnae
ENSPKIG00000002455	tarbp2	100	78.371	ENSLOCG00000005711	tarbp2	100	78.371	Lepisosteus_oculatus
ENSPKIG00000002455	tarbp2	76	61.268	ENSLAFG00000002620	TARBP2	99	60.071	Loxodonta_africana
ENSPKIG00000002455	tarbp2	100	65.940	ENSMFAG00000013567	TARBP2	94	80.000	Macaca_fascicularis
ENSPKIG00000002455	tarbp2	100	65.940	ENSMMUG00000018492	TARBP2	100	66.940	Macaca_mulatta
ENSPKIG00000002455	tarbp2	100	65.940	ENSMNEG00000036477	TARBP2	94	80.000	Macaca_nemestrina
ENSPKIG00000002455	tarbp2	100	65.940	ENSMLEG00000029583	TARBP2	94	80.000	Mandrillus_leucophaeus
ENSPKIG00000002455	tarbp2	95	79.939	ENSMAMG00000010272	tarbp2	97	81.287	Mastacembelus_armatus
ENSPKIG00000002455	tarbp2	100	76.685	ENSMZEG00005006895	tarbp2	100	77.247	Maylandia_zebra
ENSPKIG00000002455	tarbp2	100	66.940	ENSMAUG00000019805	Tarbp2	100	67.486	Mesocricetus_auratus
ENSPKIG00000002455	tarbp2	94	68.406	ENSMICG00000027441	TARBP2	94	81.333	Microcebus_murinus
ENSPKIG00000002455	tarbp2	100	67.760	ENSMOCG00000003691	Tarbp2	100	67.760	Microtus_ochrogaster
ENSPKIG00000002455	tarbp2	94	80.299	ENSMMOG00000010374	tarbp2	100	80.909	Mola_mola
ENSPKIG00000002455	tarbp2	100	77.994	ENSMALG00000009773	tarbp2	100	78.933	Monopterus_albus
ENSPKIG00000002455	tarbp2	100	67.213	MGP_CAROLIEiJ_G0020356	Tarbp2	91	94.340	Mus_caroli
ENSPKIG00000002455	tarbp2	100	67.213	ENSMUSG00000023051	Tarbp2	91	94.340	Mus_musculus
ENSPKIG00000002455	tarbp2	100	66.940	MGP_PahariEiJ_G0020355	Tarbp2	91	94.340	Mus_pahari
ENSPKIG00000002455	tarbp2	100	67.213	MGP_SPRETEiJ_G0021249	Tarbp2	91	94.340	Mus_spretus
ENSPKIG00000002455	tarbp2	100	67.486	ENSMPUG00000005944	TARBP2	100	67.486	Mustela_putorius_furo
ENSPKIG00000002455	tarbp2	100	66.667	ENSMLUG00000010035	TARBP2	100	67.302	Myotis_lucifugus
ENSPKIG00000002455	tarbp2	100	65.940	ENSNLEG00000017690	TARBP2	94	81.333	Nomascus_leucogenys
ENSPKIG00000002455	tarbp2	100	68.588	ENSMEUG00000001916	TARBP2	100	68.588	Notamacropus_eugenii
ENSPKIG00000002455	tarbp2	63	70.136	ENSOPRG00000011397	TARBP2	98	70.136	Ochotona_princeps
ENSPKIG00000002455	tarbp2	61	71.239	ENSODEG00000013413	TARBP2	100	71.239	Octodon_degus
ENSPKIG00000002455	tarbp2	95	75.988	ENSONIG00000005115	tarbp2	98	73.521	Oreochromis_niloticus
ENSPKIG00000002455	tarbp2	100	66.757	ENSOCUG00000005700	TARBP2	100	66.757	Oryctolagus_cuniculus
ENSPKIG00000002455	tarbp2	100	78.652	ENSORLG00000005209	tarbp2	100	78.652	Oryzias_latipes
ENSPKIG00000002455	tarbp2	100	78.652	ENSORLG00020017755	tarbp2	100	78.652	Oryzias_latipes_hni
ENSPKIG00000002455	tarbp2	100	78.652	ENSORLG00015013237	tarbp2	100	78.652	Oryzias_latipes_hsok
ENSPKIG00000002455	tarbp2	100	79.775	ENSOMEG00000018860	tarbp2	100	79.775	Oryzias_melastigma
ENSPKIG00000002455	tarbp2	100	66.757	ENSOGAG00000001744	TARBP2	100	65.668	Otolemur_garnettii
ENSPKIG00000002455	tarbp2	100	65.676	ENSOARG00000016437	TARBP2	100	67.030	Ovis_aries
ENSPKIG00000002455	tarbp2	100	65.940	ENSPPAG00000030429	TARBP2	94	81.333	Pan_paniscus
ENSPKIG00000002455	tarbp2	100	66.393	ENSPPRG00000000189	TARBP2	100	66.485	Panthera_pardus
ENSPKIG00000002455	tarbp2	100	67.877	ENSPTIG00000007859	TARBP2	100	67.877	Panthera_tigris_altaica
ENSPKIG00000002455	tarbp2	100	65.940	ENSPTRG00000005020	TARBP2	94	81.333	Pan_troglodytes
ENSPKIG00000002455	tarbp2	100	65.940	ENSPANG00000010689	TARBP2	94	80.000	Papio_anubis
ENSPKIG00000002455	tarbp2	100	79.775	ENSPMGG00000006497	tarbp2	100	79.775	Periophthalmus_magnuspinnatus
ENSPKIG00000002455	tarbp2	100	67.397	ENSPEMG00000014285	Tarbp2	100	67.397	Peromyscus_maniculatus_bairdii
ENSPKIG00000002455	tarbp2	92	62.928	ENSPMAG00000000105	tarbp2	99	62.928	Petromyzon_marinus
ENSPKIG00000002455	tarbp2	100	68.588	ENSPCIG00000006672	TARBP2	92	68.588	Phascolarctos_cinereus
ENSPKIG00000002455	tarbp2	100	79.494	ENSPFOG00000007586	tarbp2	100	79.494	Poecilia_formosa
ENSPKIG00000002455	tarbp2	100	79.775	ENSPLAG00000017659	tarbp2	100	79.775	Poecilia_latipinna
ENSPKIG00000002455	tarbp2	100	79.494	ENSPMEG00000007775	tarbp2	100	79.494	Poecilia_mexicana
ENSPKIG00000002455	tarbp2	100	79.775	ENSPREG00000007815	tarbp2	100	79.775	Poecilia_reticulata
ENSPKIG00000002455	tarbp2	100	65.714	ENSPPYG00000004583	TARBP2	100	66.857	Pongo_abelii
ENSPKIG00000002455	tarbp2	79	63.356	ENSPCAG00000005352	TARBP2	80	63.574	Procavia_capensis
ENSPKIG00000002455	tarbp2	100	67.030	ENSPCOG00000013102	TARBP2	94	81.333	Propithecus_coquereli
ENSPKIG00000002455	tarbp2	100	66.307	ENSPVAG00000012286	TARBP2	100	66.307	Pteropus_vampyrus
ENSPKIG00000002455	tarbp2	100	76.685	ENSPNYG00000014125	tarbp2	100	77.247	Pundamilia_nyererei
ENSPKIG00000002455	tarbp2	100	81.972	ENSPNAG00000011128	tarbp2	100	82.584	Pygocentrus_nattereri
ENSPKIG00000002455	tarbp2	100	66.393	ENSRNOG00000042355	Tarbp2	100	66.393	Rattus_norvegicus
ENSPKIG00000002455	tarbp2	100	65.217	ENSRBIG00000027150	TARBP2	94	80.000	Rhinopithecus_bieti
ENSPKIG00000002455	tarbp2	100	65.217	ENSRROG00000044783	TARBP2	94	80.000	Rhinopithecus_roxellana
ENSPKIG00000002455	tarbp2	100	66.757	ENSSBOG00000027305	TARBP2	94	81.333	Saimiri_boliviensis_boliviensis
ENSPKIG00000002455	tarbp2	99	67.500	ENSSHAG00000007064	TARBP2	100	70.769	Sarcophilus_harrisii
ENSPKIG00000002455	tarbp2	100	83.287	ENSSFOG00015010784	tarbp2	100	83.473	Scleropages_formosus
ENSPKIG00000002455	tarbp2	100	77.624	ENSSMAG00000012769	tarbp2	100	77.624	Scophthalmus_maximus
ENSPKIG00000002455	tarbp2	100	79.494	ENSSDUG00000018818	tarbp2	100	80.056	Seriola_dumerili
ENSPKIG00000002455	tarbp2	100	79.213	ENSSLDG00000001835	tarbp2	100	79.775	Seriola_lalandi_dorsalis
ENSPKIG00000002455	tarbp2	76	68.159	ENSSARG00000001010	TARBP2	72	69.492	Sorex_araneus
ENSPKIG00000002455	tarbp2	95	53.153	ENSSPUG00000005895	TARBP2	98	51.381	Sphenodon_punctatus
ENSPKIG00000002455	tarbp2	100	80.337	ENSSPAG00000022797	tarbp2	100	80.337	Stegastes_partitus
ENSPKIG00000002455	tarbp2	100	65.860	ENSSSCG00000000276	TARBP2	100	68.116	Sus_scrofa
ENSPKIG00000002455	tarbp2	72	59.846	ENSTGUG00000017031	TARBP2	100	59.846	Taeniopygia_guttata
ENSPKIG00000002455	tarbp2	100	79.494	ENSTRUG00000014379	tarbp2	100	79.494	Takifugu_rubripes
ENSPKIG00000002455	tarbp2	100	78.090	ENSTNIG00000007065	tarbp2	100	78.090	Tetraodon_nigroviridis
ENSPKIG00000002455	tarbp2	100	66.576	ENSTTRG00000017177	TARBP2	100	67.302	Tursiops_truncatus
ENSPKIG00000002455	tarbp2	100	66.576	ENSUAMG00000009011	TARBP2	100	67.030	Ursus_americanus
ENSPKIG00000002455	tarbp2	100	66.033	ENSUMAG00000010461	TARBP2	100	66.485	Ursus_maritimus
ENSPKIG00000002455	tarbp2	100	66.033	ENSVVUG00000028150	TARBP2	100	68.406	Vulpes_vulpes
ENSPKIG00000002455	tarbp2	98	70.170	ENSXETG00000012644	tarbp2	99	70.170	Xenopus_tropicalis
ENSPKIG00000002455	tarbp2	100	79.775	ENSXMAG00000017836	tarbp2	100	79.775	Xiphophorus_maculatus