EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000002712 (Gene tree)
Gene ID: 111851866
Gene Symbol: sf3b3
Alias: -
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 21975 bases
Position: chrPGUA01000024.1:1451646-1473620
Accession: 111851866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000016408	CPSF_A	PF03178.15	3.8e-99	1	1
ENSPKIP00000016448	CPSF_A	PF03178.15	2.6e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000040899	-	5258	-	ENSPKIP00000016408	1217 (aa)	XP_023682925	UPI000CD66675
ENSPKIT00000040939	-	3264	-	ENSPKIP00000016448	1087 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000002712's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000002712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000002712	sf3b3	100	92.769	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSPKIG00000002712	sf3b3	96	96.584	ENSAPOG00000006172	sf3b3	98	96.584	Acanthochromis_polyacanthus
ENSPKIG00000002712	sf3b3	100	92.459	ENSAMEG00000002187	SF3B3	100	92.459	Ailuropoda_melanoleuca
ENSPKIG00000002712	sf3b3	100	96.872	ENSACIG00000016487	sf3b3	100	96.872	Amphilophus_citrinellus
ENSPKIG00000002712	sf3b3	100	96.549	ENSAOCG00000007158	sf3b3	100	96.549	Amphiprion_ocellaris
ENSPKIG00000002712	sf3b3	100	96.549	ENSAPEG00000022786	sf3b3	100	96.549	Amphiprion_percula
ENSPKIG00000002712	sf3b3	100	96.713	ENSATEG00000013708	sf3b3	100	96.713	Anabas_testudineus
ENSPKIG00000002712	sf3b3	82	93.687	ENSAPLG00000004996	SF3B3	99	92.683	Anas_platyrhynchos
ENSPKIG00000002712	sf3b3	100	92.769	ENSACAG00000001817	SF3B3	100	92.769	Anolis_carolinensis
ENSPKIG00000002712	sf3b3	100	92.769	ENSANAG00000028001	SF3B3	100	92.769	Aotus_nancymaae
ENSPKIG00000002712	sf3b3	100	96.596	ENSACLG00000022555	sf3b3	100	96.596	Astatotilapia_calliptera
ENSPKIG00000002712	sf3b3	100	97.371	ENSAMXG00000003410	sf3b3	100	97.371	Astyanax_mexicanus
ENSPKIG00000002712	sf3b3	100	92.769	ENSBTAG00000010627	SF3B3	100	92.769	Bos_taurus
ENSPKIG00000002712	sf3b3	100	60.016	WBGene00019323	teg-4	100	60.016	Caenorhabditis_elegans
ENSPKIG00000002712	sf3b3	100	92.769	ENSCJAG00000014773	SF3B3	99	92.769	Callithrix_jacchus
ENSPKIG00000002712	sf3b3	100	92.687	ENSCAFG00000020151	SF3B3	100	92.687	Canis_familiaris
ENSPKIG00000002712	sf3b3	100	92.687	ENSCAFG00020020912	SF3B3	100	92.687	Canis_lupus_dingo
ENSPKIG00000002712	sf3b3	100	92.687	ENSCHIG00000019822	SF3B3	100	92.687	Capra_hircus
ENSPKIG00000002712	sf3b3	100	92.769	ENSTSYG00000007910	SF3B3	100	92.769	Carlito_syrichta
ENSPKIG00000002712	sf3b3	84	78.947	ENSCAPG00000001484	SF3B3	92	78.947	Cavia_aperea
ENSPKIG00000002712	sf3b3	100	91.619	ENSCPOG00000000586	SF3B3	100	91.619	Cavia_porcellus
ENSPKIG00000002712	sf3b3	100	92.769	ENSCCAG00000017736	SF3B3	100	92.769	Cebus_capucinus
ENSPKIG00000002712	sf3b3	100	92.769	ENSCATG00000036562	SF3B3	100	92.769	Cercocebus_atys
ENSPKIG00000002712	sf3b3	100	92.769	ENSCLAG00000003921	SF3B3	100	92.769	Chinchilla_lanigera
ENSPKIG00000002712	sf3b3	100	92.769	ENSCSAG00000004371	SF3B3	100	92.769	Chlorocebus_sabaeus
ENSPKIG00000002712	sf3b3	90	90.031	ENSCHOG00000001878	SF3B3	90	90.031	Choloepus_hoffmanni
ENSPKIG00000002712	sf3b3	100	92.440	ENSCPBG00000015853	SF3B3	100	92.440	Chrysemys_picta_bellii
ENSPKIG00000002712	sf3b3	100	79.228	ENSCING00000001342	-	100	79.228	Ciona_intestinalis
ENSPKIG00000002712	sf3b3	99	78.325	ENSCSAVG00000011454	-	100	78.325	Ciona_savignyi
ENSPKIG00000002712	sf3b3	100	89.236	ENSCANG00000042920	SF3B3	100	89.729	Colobus_angolensis_palliatus
ENSPKIG00000002712	sf3b3	100	92.687	ENSCGRG00001015908	Sf3b3	100	92.687	Cricetulus_griseus_chok1gshd
ENSPKIG00000002712	sf3b3	100	92.687	ENSCGRG00000010180	Sf3b3	100	92.687	Cricetulus_griseus_crigri
ENSPKIG00000002712	sf3b3	83	94.586	ENSCSEG00000014192	sf3b3	99	94.711	Cynoglossus_semilaevis
ENSPKIG00000002712	sf3b3	100	96.467	ENSCVAG00000010459	sf3b3	100	96.467	Cyprinodon_variegatus
ENSPKIG00000002712	sf3b3	100	96.960	ENSDARG00000103553	sf3b3	100	96.960	Danio_rerio
ENSPKIG00000002712	sf3b3	92	89.296	ENSDNOG00000043626	SF3B3	100	92.285	Dasypus_novemcinctus
ENSPKIG00000002712	sf3b3	100	92.769	ENSDORG00000014176	Sf3b3	100	92.769	Dipodomys_ordii
ENSPKIG00000002712	sf3b3	100	74.735	FBgn0035162	Sf3b3	100	74.735	Drosophila_melanogaster
ENSPKIG00000002712	sf3b3	84	96.203	ENSETEG00000002729	SF3B3	84	96.203	Echinops_telfairi
ENSPKIG00000002712	sf3b3	100	86.196	ENSEBUG00000006117	sf3b3	100	86.196	Eptatretus_burgeri
ENSPKIG00000002712	sf3b3	100	92.687	ENSEASG00005013376	SF3B3	100	92.687	Equus_asinus_asinus
ENSPKIG00000002712	sf3b3	100	92.687	ENSECAG00000014053	SF3B3	100	92.687	Equus_caballus
ENSPKIG00000002712	sf3b3	93	92.807	ENSEEUG00000015611	SF3B3	93	92.807	Erinaceus_europaeus
ENSPKIG00000002712	sf3b3	100	95.738	ENSELUG00000015417	sf3b3	100	95.738	Esox_lucius
ENSPKIG00000002712	sf3b3	100	92.687	ENSFCAG00000009487	SF3B3	100	92.687	Felis_catus
ENSPKIG00000002712	sf3b3	100	92.030	ENSFALG00000007372	SF3B3	100	92.030	Ficedula_albicollis
ENSPKIG00000002712	sf3b3	100	92.769	ENSFDAG00000002608	SF3B3	100	92.769	Fukomys_damarensis
ENSPKIG00000002712	sf3b3	100	96.878	ENSFHEG00000017824	sf3b3	100	96.878	Fundulus_heteroclitus
ENSPKIG00000002712	sf3b3	100	93.021	ENSGMOG00000008139	sf3b3	100	93.021	Gadus_morhua
ENSPKIG00000002712	sf3b3	100	92.440	ENSGALG00000002531	SF3B3	100	92.440	Gallus_gallus
ENSPKIG00000002712	sf3b3	100	96.467	ENSGAFG00000015206	sf3b3	100	96.467	Gambusia_affinis
ENSPKIG00000002712	sf3b3	100	96.716	ENSGACG00000002646	sf3b3	100	96.716	Gasterosteus_aculeatus
ENSPKIG00000002712	sf3b3	96	92.485	ENSGAGG00000006746	SF3B3	97	92.485	Gopherus_agassizii
ENSPKIG00000002712	sf3b3	100	92.769	ENSGGOG00000003246	SF3B3	100	92.769	Gorilla_gorilla
ENSPKIG00000002712	sf3b3	100	91.352	ENSHBUG00000005960	sf3b3	100	92.364	Haplochromis_burtoni
ENSPKIG00000002712	sf3b3	100	92.769	ENSHGLG00000010135	SF3B3	100	92.769	Heterocephalus_glaber_female
ENSPKIG00000002712	sf3b3	100	90.673	ENSHGLG00100011148	SF3B3	100	90.673	Heterocephalus_glaber_male
ENSPKIG00000002712	sf3b3	100	96.302	ENSHCOG00000011981	sf3b3	100	96.302	Hippocampus_comes
ENSPKIG00000002712	sf3b3	100	97.371	ENSIPUG00000020435	sf3b3	100	97.371	Ictalurus_punctatus
ENSPKIG00000002712	sf3b3	100	92.769	ENSSTOG00000007065	SF3B3	100	92.769	Ictidomys_tridecemlineatus
ENSPKIG00000002712	sf3b3	100	92.769	ENSJJAG00000003948	Sf3b3	100	92.769	Jaculus_jaculus
ENSPKIG00000002712	sf3b3	100	94.659	ENSKMAG00000004066	sf3b3	99	96.755	Kryptolebias_marmoratus
ENSPKIG00000002712	sf3b3	100	96.549	ENSLBEG00000018302	sf3b3	100	96.549	Labrus_bergylta
ENSPKIG00000002712	sf3b3	98	89.784	ENSLACG00000012501	SF3B3	99	89.784	Latimeria_chalumnae
ENSPKIG00000002712	sf3b3	100	96.798	ENSLOCG00000007566	sf3b3	100	96.798	Lepisosteus_oculatus
ENSPKIG00000002712	sf3b3	100	92.687	ENSLAFG00000012219	SF3B3	100	92.687	Loxodonta_africana
ENSPKIG00000002712	sf3b3	100	92.769	ENSMFAG00000045487	SF3B3	100	92.769	Macaca_fascicularis
ENSPKIG00000002712	sf3b3	100	92.769	ENSMMUG00000017812	SF3B3	100	92.769	Macaca_mulatta
ENSPKIG00000002712	sf3b3	100	92.769	ENSMNEG00000033385	SF3B3	100	92.769	Macaca_nemestrina
ENSPKIG00000002712	sf3b3	100	89.236	ENSMLEG00000043891	SF3B3	100	89.236	Mandrillus_leucophaeus
ENSPKIG00000002712	sf3b3	100	97.206	ENSMAMG00000016837	sf3b3	100	97.206	Mastacembelus_armatus
ENSPKIG00000002712	sf3b3	100	96.795	ENSMZEG00005010836	sf3b3	100	96.795	Maylandia_zebra
ENSPKIG00000002712	sf3b3	96	96.565	ENSMZEG00005026015	sf3b3	99	96.565	Maylandia_zebra
ENSPKIG00000002712	sf3b3	100	92.440	ENSMGAG00000001597	SF3B3	100	92.440	Meleagris_gallopavo
ENSPKIG00000002712	sf3b3	81	76.155	ENSMAUG00000013618	Sf3b3	95	76.529	Mesocricetus_auratus
ENSPKIG00000002712	sf3b3	100	91.879	ENSMICG00000001363	SF3B3	100	91.879	Microcebus_murinus
ENSPKIG00000002712	sf3b3	100	92.687	ENSMOCG00000006108	Sf3b3	100	92.687	Microtus_ochrogaster
ENSPKIG00000002712	sf3b3	96	96.756	ENSMMOG00000002598	sf3b3	97	96.756	Mola_mola
ENSPKIG00000002712	sf3b3	100	88.588	ENSMODG00000014363	SF3B3	100	88.588	Monodelphis_domestica
ENSPKIG00000002712	sf3b3	100	96.385	ENSMALG00000008014	sf3b3	100	96.385	Monopterus_albus
ENSPKIG00000002712	sf3b3	100	92.687	MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.687	Mus_caroli
ENSPKIG00000002712	sf3b3	100	92.687	ENSMUSG00000033732	Sf3b3	100	92.687	Mus_musculus
ENSPKIG00000002712	sf3b3	100	92.605	MGP_SPRETEiJ_G0032681	Sf3b3	100	92.605	Mus_spretus
ENSPKIG00000002712	sf3b3	100	92.687	ENSMPUG00000010277	SF3B3	100	92.687	Mustela_putorius_furo
ENSPKIG00000002712	sf3b3	100	92.769	ENSMLUG00000014607	SF3B3	100	92.769	Myotis_lucifugus
ENSPKIG00000002712	sf3b3	100	92.769	ENSNGAG00000021903	Sf3b3	100	92.769	Nannospalax_galili
ENSPKIG00000002712	sf3b3	90	94.444	ENSNBRG00000007197	sf3b3	99	94.444	Neolamprologus_brichardi
ENSPKIG00000002712	sf3b3	100	91.297	ENSNLEG00000016127	SF3B3	100	91.297	Nomascus_leucogenys
ENSPKIG00000002712	sf3b3	92	88.874	ENSMEUG00000004479	SF3B3	94	88.874	Notamacropus_eugenii
ENSPKIG00000002712	sf3b3	98	89.606	ENSOPRG00000009847	SF3B3	100	89.606	Ochotona_princeps
ENSPKIG00000002712	sf3b3	100	92.769	ENSODEG00000014154	SF3B3	100	92.769	Octodon_degus
ENSPKIG00000002712	sf3b3	100	96.713	ENSONIG00000011198	sf3b3	100	96.713	Oreochromis_niloticus
ENSPKIG00000002712	sf3b3	100	92.769	ENSOANG00000001161	-	100	92.769	Ornithorhynchus_anatinus
ENSPKIG00000002712	sf3b3	100	90.879	ENSOCUG00000004139	SF3B3	100	90.879	Oryctolagus_cuniculus
ENSPKIG00000002712	sf3b3	100	96.385	ENSORLG00000013472	sf3b3	100	96.385	Oryzias_latipes
ENSPKIG00000002712	sf3b3	100	96.385	ENSORLG00020017473	sf3b3	100	96.385	Oryzias_latipes_hni
ENSPKIG00000002712	sf3b3	100	96.385	ENSORLG00015007710	sf3b3	100	96.385	Oryzias_latipes_hsok
ENSPKIG00000002712	sf3b3	100	95.974	ENSOMEG00000014483	sf3b3	100	95.974	Oryzias_melastigma
ENSPKIG00000002712	sf3b3	100	92.541	ENSOGAG00000016051	SF3B3	100	92.541	Otolemur_garnettii
ENSPKIG00000002712	sf3b3	100	92.459	ENSOARG00000004816	SF3B3	100	92.459	Ovis_aries
ENSPKIG00000002712	sf3b3	100	92.769	ENSPPAG00000026807	SF3B3	100	92.769	Pan_paniscus
ENSPKIG00000002712	sf3b3	100	92.687	ENSPPRG00000001686	SF3B3	100	92.687	Panthera_pardus
ENSPKIG00000002712	sf3b3	97	92.410	ENSPTIG00000020382	SF3B3	100	92.410	Panthera_tigris_altaica
ENSPKIG00000002712	sf3b3	100	92.769	ENSPTRG00000008308	SF3B3	100	92.769	Pan_troglodytes
ENSPKIG00000002712	sf3b3	100	92.769	ENSPANG00000024075	SF3B3	100	92.769	Papio_anubis
ENSPKIG00000002712	sf3b3	97	89.420	ENSPSIG00000002232	SF3B3	100	92.272	Pelodiscus_sinensis
ENSPKIG00000002712	sf3b3	100	92.687	ENSPEMG00000008603	Sf3b3	100	92.687	Peromyscus_maniculatus_bairdii
ENSPKIG00000002712	sf3b3	100	90.715	ENSPMAG00000001793	sf3b3	100	90.715	Petromyzon_marinus
ENSPKIG00000002712	sf3b3	100	92.769	ENSPCIG00000014927	SF3B3	100	92.769	Phascolarctos_cinereus
ENSPKIG00000002712	sf3b3	100	96.549	ENSPFOG00000015516	sf3b3	100	96.549	Poecilia_formosa
ENSPKIG00000002712	sf3b3	100	96.549	ENSPLAG00000014330	sf3b3	100	96.549	Poecilia_latipinna
ENSPKIG00000002712	sf3b3	100	96.631	ENSPMEG00000019856	sf3b3	100	96.631	Poecilia_mexicana
ENSPKIG00000002712	sf3b3	82	96.501	ENSPREG00000019669	sf3b3	97	96.443	Poecilia_reticulata
ENSPKIG00000002712	sf3b3	95	94.595	ENSPPYG00000007539	SF3B3	100	94.030	Pongo_abelii
ENSPKIG00000002712	sf3b3	100	72.309	ENSPCAG00000002623	SF3B3	100	72.309	Procavia_capensis
ENSPKIG00000002712	sf3b3	84	97.196	ENSPCOG00000026582	SF3B3	100	97.196	Propithecus_coquereli
ENSPKIG00000002712	sf3b3	100	92.605	ENSPVAG00000000684	SF3B3	100	92.605	Pteropus_vampyrus
ENSPKIG00000002712	sf3b3	100	96.713	ENSPNYG00000003528	sf3b3	100	96.713	Pundamilia_nyererei
ENSPKIG00000002712	sf3b3	100	98.028	ENSPNAG00000015419	sf3b3	100	98.028	Pygocentrus_nattereri
ENSPKIG00000002712	sf3b3	100	92.687	ENSRNOG00000017724	Sf3b3	100	92.687	Rattus_norvegicus
ENSPKIG00000002712	sf3b3	100	92.769	ENSRBIG00000021904	SF3B3	100	92.769	Rhinopithecus_bieti
ENSPKIG00000002712	sf3b3	100	92.769	ENSRROG00000045703	SF3B3	100	92.769	Rhinopithecus_roxellana
ENSPKIG00000002712	sf3b3	78	40.323	YML049C	-	75	40.323	Saccharomyces_cerevisiae
ENSPKIG00000002712	sf3b3	100	92.769	ENSSBOG00000029156	SF3B3	100	92.769	Saimiri_boliviensis_boliviensis
ENSPKIG00000002712	sf3b3	100	92.769	ENSSHAG00000000372	SF3B3	100	92.769	Sarcophilus_harrisii
ENSPKIG00000002712	sf3b3	100	97.946	ENSSFOG00015012877	sf3b3	100	97.946	Scleropages_formosus
ENSPKIG00000002712	sf3b3	100	95.974	ENSSMAG00000014386	sf3b3	100	95.974	Scophthalmus_maximus
ENSPKIG00000002712	sf3b3	100	97.124	ENSSDUG00000021201	sf3b3	100	97.124	Seriola_dumerili
ENSPKIG00000002712	sf3b3	100	97.042	ENSSLDG00000017532	sf3b3	100	97.042	Seriola_lalandi_dorsalis
ENSPKIG00000002712	sf3b3	93	93.478	ENSSARG00000006917	SF3B3	93	93.478	Sorex_araneus
ENSPKIG00000002712	sf3b3	100	92.523	ENSSPUG00000006253	SF3B3	100	92.523	Sphenodon_punctatus
ENSPKIG00000002712	sf3b3	100	89.154	ENSSPAG00000003125	sf3b3	100	89.154	Stegastes_partitus
ENSPKIG00000002712	sf3b3	100	92.687	ENSSSCG00000025323	SF3B3	100	92.687	Sus_scrofa
ENSPKIG00000002712	sf3b3	100	92.200	ENSTGUG00000006082	SF3B3	100	92.200	Taeniopygia_guttata
ENSPKIG00000002712	sf3b3	61	79.818	ENSTRUG00000015623	sf3b3	96	79.818	Takifugu_rubripes
ENSPKIG00000002712	sf3b3	89	96.140	ENSTNIG00000004857	sf3b3	100	96.140	Tetraodon_nigroviridis
ENSPKIG00000002712	sf3b3	93	78.697	ENSTBEG00000002946	SF3B3	100	78.697	Tupaia_belangeri
ENSPKIG00000002712	sf3b3	100	91.865	ENSTTRG00000005855	SF3B3	100	91.865	Tursiops_truncatus
ENSPKIG00000002712	sf3b3	100	92.687	ENSUAMG00000006780	SF3B3	100	92.687	Ursus_americanus
ENSPKIG00000002712	sf3b3	100	92.687	ENSUMAG00000017757	SF3B3	100	92.687	Ursus_maritimus
ENSPKIG00000002712	sf3b3	100	77.979	ENSVPAG00000003202	SF3B3	100	77.979	Vicugna_pacos
ENSPKIG00000002712	sf3b3	100	92.769	ENSVVUG00000017922	SF3B3	100	92.769	Vulpes_vulpes
ENSPKIG00000002712	sf3b3	100	92.523	ENSXETG00000032869	SF3B3	100	92.523	Xenopus_tropicalis
ENSPKIG00000002712	sf3b3	78	96.564	ENSXCOG00000013628	sf3b3	97	96.603	Xiphophorus_couchianus
ENSPKIG00000002712	sf3b3	100	96.549	ENSXMAG00000006334	sf3b3	100	96.549	Xiphophorus_maculatus