EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000002865 (Gene tree)
Gene ID: 111835870
Gene Symbol: snrpb
Alias: -
Full Name: small nuclear ribonucleoprotein-associated protein B'
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 4197 bases
Position: chrPGUA01000055.1:668276-672472
Accession: 111835870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000016611	LSM	PF01423.22	1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000041106	-	2131	-	ENSPKIP00000016611	238 (aa)	XP_023652366	UPI000CD636DA

Gene Model

Click here to download ENSPKIG00000002865's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000002865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000002865	snrpb	70	94.048	ENSG00000125835	SNRPB	74	100.000	Homo_sapiens
ENSPKIG00000002865	snrpb	99	96.639	ENSAPOG00000019606	snrpb	81	96.639	Acanthochromis_polyacanthus
ENSPKIG00000002865	snrpb	69	94.012	ENSAMEG00000011353	SNRPB	69	92.216	Ailuropoda_melanoleuca
ENSPKIG00000002865	snrpb	93	96.413	ENSACIG00000014480	snrpb	99	96.413	Amphilophus_citrinellus
ENSPKIG00000002865	snrpb	99	96.218	ENSAOCG00000006876	snrpb	99	96.218	Amphiprion_ocellaris
ENSPKIG00000002865	snrpb	99	96.218	ENSAPEG00000021585	snrpb	99	96.218	Amphiprion_percula
ENSPKIG00000002865	snrpb	99	95.798	ENSATEG00000009836	snrpb	99	95.798	Anabas_testudineus
ENSPKIG00000002865	snrpb	66	95.000	ENSACAG00000002053	SNRPB	69	93.750	Anolis_carolinensis
ENSPKIG00000002865	snrpb	96	87.013	ENSANAG00000036271	-	68	85.119	Aotus_nancymaae
ENSPKIG00000002865	snrpb	70	94.048	ENSANAG00000024443	-	73	92.262	Aotus_nancymaae
ENSPKIG00000002865	snrpb	99	96.639	ENSACLG00000014707	snrpb	99	96.639	Astatotilapia_calliptera
ENSPKIG00000002865	snrpb	100	98.319	ENSAMXG00000029434	snrpb	100	98.319	Astyanax_mexicanus
ENSPKIG00000002865	snrpb	91	82.805	ENSBTAG00000001038	SNRPB	73	92.857	Bos_taurus
ENSPKIG00000002865	snrpb	70	94.048	ENSCJAG00000020971	-	73	92.262	Callithrix_jacchus
ENSPKIG00000002865	snrpb	89	85.981	ENSCJAG00000023097	-	70	86.905	Callithrix_jacchus
ENSPKIG00000002865	snrpb	70	94.048	ENSCAFG00000006693	-	73	92.262	Canis_familiaris
ENSPKIG00000002865	snrpb	76	80.435	ENSCAFG00000031109	-	70	81.065	Canis_familiaris
ENSPKIG00000002865	snrpb	70	94.048	ENSCAFG00020016981	-	70	92.262	Canis_lupus_dingo
ENSPKIG00000002865	snrpb	76	93.443	ENSCHIG00000025449	-	73	92.857	Capra_hircus
ENSPKIG00000002865	snrpb	70	94.048	ENSTSYG00000014498	-	73	92.262	Carlito_syrichta
ENSPKIG00000002865	snrpb	97	72.609	ENSTSYG00000032303	-	55	76.000	Carlito_syrichta
ENSPKIG00000002865	snrpb	69	94.012	ENSCAPG00000012669	SNRPB	73	92.216	Cavia_aperea
ENSPKIG00000002865	snrpb	70	94.048	ENSCPOG00000039408	SNRPB	73	92.262	Cavia_porcellus
ENSPKIG00000002865	snrpb	53	83.465	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSPKIG00000002865	snrpb	70	94.048	ENSCCAG00000026002	SNRPB	73	92.262	Cebus_capucinus
ENSPKIG00000002865	snrpb	70	94.048	ENSCATG00000030230	SNRPB	73	92.262	Cercocebus_atys
ENSPKIG00000002865	snrpb	70	94.048	ENSCLAG00000012442	SNRPB	71	92.262	Chinchilla_lanigera
ENSPKIG00000002865	snrpb	70	94.048	ENSCSAG00000010840	SNRPB	73	92.262	Chlorocebus_sabaeus
ENSPKIG00000002865	snrpb	100	96.250	ENSCPBG00000026801	SNRPB	100	96.250	Chrysemys_picta_bellii
ENSPKIG00000002865	snrpb	70	94.048	ENSCANG00000019461	SNRPB	73	92.262	Colobus_angolensis_palliatus
ENSPKIG00000002865	snrpb	70	94.048	ENSCGRG00001023046	Snrpb	73	92.262	Cricetulus_griseus_chok1gshd
ENSPKIG00000002865	snrpb	68	93.865	ENSCGRG00000010423	Snrpb	71	92.500	Cricetulus_griseus_crigri
ENSPKIG00000002865	snrpb	99	97.458	ENSCSEG00000020328	snrpb	99	97.458	Cynoglossus_semilaevis
ENSPKIG00000002865	snrpb	99	98.729	ENSDARG00000011125	snrpb	99	98.729	Danio_rerio
ENSPKIG00000002865	snrpb	70	94.048	ENSDNOG00000015545	-	70	92.262	Dasypus_novemcinctus
ENSPKIG00000002865	snrpb	70	88.095	ENSDNOG00000007896	-	69	86.905	Dasypus_novemcinctus
ENSPKIG00000002865	snrpb	74	93.220	ENSDORG00000029558	Snrpb	70	92.593	Dipodomys_ordii
ENSPKIG00000002865	snrpb	76	64.088	FBgn0262601	SmB	74	69.799	Drosophila_melanogaster
ENSPKIG00000002865	snrpb	75	80.978	ENSEBUG00000007467	SNRPB	62	89.262	Eptatretus_burgeri
ENSPKIG00000002865	snrpb	70	93.452	ENSEASG00005012991	SNRPB	73	92.262	Equus_asinus_asinus
ENSPKIG00000002865	snrpb	70	94.048	ENSECAG00000011944	SNRPB	73	92.262	Equus_caballus
ENSPKIG00000002865	snrpb	70	94.048	ENSEEUG00000015568	SNRPB	59	92.262	Erinaceus_europaeus
ENSPKIG00000002865	snrpb	100	97.059	ENSELUG00000014564	snrpb	100	97.059	Esox_lucius
ENSPKIG00000002865	snrpb	70	94.048	ENSFCAG00000034090	-	73	92.262	Felis_catus
ENSPKIG00000002865	snrpb	73	94.286	ENSFALG00000004866	SNRPB	69	94.375	Ficedula_albicollis
ENSPKIG00000002865	snrpb	70	94.048	ENSFDAG00000009937	SNRPB	73	92.262	Fukomys_damarensis
ENSPKIG00000002865	snrpb	76	94.536	ENSGALG00000035421	SNRPN	70	94.048	Gallus_gallus
ENSPKIG00000002865	snrpb	71	97.059	ENSGAFG00000019558	snrpb	72	97.576	Gambusia_affinis
ENSPKIG00000002865	snrpb	99	96.610	ENSGACG00000003262	snrpb	99	96.610	Gasterosteus_aculeatus
ENSPKIG00000002865	snrpb	100	96.250	ENSGAGG00000001308	SNRPB	100	96.250	Gopherus_agassizii
ENSPKIG00000002865	snrpb	70	94.048	ENSGGOG00000016138	SNRPB	73	92.262	Gorilla_gorilla
ENSPKIG00000002865	snrpb	99	96.639	ENSHBUG00000008369	snrpb	99	96.639	Haplochromis_burtoni
ENSPKIG00000002865	snrpb	70	94.048	ENSHGLG00000016241	-	73	92.262	Heterocephalus_glaber_female
ENSPKIG00000002865	snrpb	63	86.000	ENSHGLG00000016505	-	72	86.000	Heterocephalus_glaber_female
ENSPKIG00000002865	snrpb	70	94.048	ENSHGLG00100012877	-	73	92.262	Heterocephalus_glaber_male
ENSPKIG00000002865	snrpb	63	86.000	ENSHGLG00100004178	-	72	86.000	Heterocephalus_glaber_male
ENSPKIG00000002865	snrpb	99	97.034	ENSHCOG00000014888	snrpb	99	97.034	Hippocampus_comes
ENSPKIG00000002865	snrpb	100	99.160	ENSIPUG00000024569	SNRPB	100	99.160	Ictalurus_punctatus
ENSPKIG00000002865	snrpb	70	92.262	ENSSTOG00000033664	-	70	91.071	Ictidomys_tridecemlineatus
ENSPKIG00000002865	snrpb	90	78.037	ENSSTOG00000027821	-	62	94.853	Ictidomys_tridecemlineatus
ENSPKIG00000002865	snrpb	70	94.048	ENSJJAG00000024170	Snrpb	73	92.262	Jaculus_jaculus
ENSPKIG00000002865	snrpb	72	98.246	ENSKMAG00000014494	snrpb	68	98.795	Kryptolebias_marmoratus
ENSPKIG00000002865	snrpb	99	97.458	ENSLBEG00000005678	snrpb	99	97.458	Labrus_bergylta
ENSPKIG00000002865	snrpb	76	93.443	ENSLACG00000011459	SNRPB	70	93.452	Latimeria_chalumnae
ENSPKIG00000002865	snrpb	100	98.739	ENSLOCG00000002687	snrpb	100	98.739	Lepisosteus_oculatus
ENSPKIG00000002865	snrpb	69	89.222	ENSLAFG00000017588	SNRPB	71	87.425	Loxodonta_africana
ENSPKIG00000002865	snrpb	70	94.048	ENSMFAG00000038756	SNRPB	73	92.262	Macaca_fascicularis
ENSPKIG00000002865	snrpb	70	94.048	ENSMMUG00000010050	SNRPB	73	92.262	Macaca_mulatta
ENSPKIG00000002865	snrpb	70	94.048	ENSMNEG00000027954	SNRPB	73	92.262	Macaca_nemestrina
ENSPKIG00000002865	snrpb	70	94.048	ENSMLEG00000022346	SNRPB	73	92.262	Mandrillus_leucophaeus
ENSPKIG00000002865	snrpb	99	96.624	ENSMAMG00000009294	snrpb	96	96.624	Mastacembelus_armatus
ENSPKIG00000002865	snrpb	99	96.639	ENSMZEG00005011856	snrpb	99	96.639	Maylandia_zebra
ENSPKIG00000002865	snrpb	76	93.443	ENSMICG00000016519	SNRPB	73	92.857	Microcebus_murinus
ENSPKIG00000002865	snrpb	75	83.425	ENSMICG00000015983	-	77	82.738	Microcebus_murinus
ENSPKIG00000002865	snrpb	70	93.452	ENSMOCG00000002892	-	73	92.262	Microtus_ochrogaster
ENSPKIG00000002865	snrpb	58	78.417	ENSMOCG00000021362	-	58	78.417	Microtus_ochrogaster
ENSPKIG00000002865	snrpb	95	97.345	ENSMMOG00000013226	snrpb	97	97.345	Mola_mola
ENSPKIG00000002865	snrpb	99	95.798	ENSMALG00000020839	snrpb	80	95.798	Monopterus_albus
ENSPKIG00000002865	snrpb	70	94.048	MGP_CAROLIEiJ_G0024293	Snrpb	74	100.000	Mus_caroli
ENSPKIG00000002865	snrpb	70	94.048	ENSMUSG00000027404	Snrpb	74	100.000	Mus_musculus
ENSPKIG00000002865	snrpb	70	94.048	MGP_PahariEiJ_G0025738	Snrpb	74	100.000	Mus_pahari
ENSPKIG00000002865	snrpb	70	94.048	MGP_SPRETEiJ_G0025213	Snrpb	73	100.000	Mus_spretus
ENSPKIG00000002865	snrpb	70	94.048	ENSMPUG00000009283	SNRPB	73	92.262	Mustela_putorius_furo
ENSPKIG00000002865	snrpb	92	89.593	ENSMLUG00000016951	SNRPB	92	89.593	Myotis_lucifugus
ENSPKIG00000002865	snrpb	70	94.048	ENSNGAG00000012051	Snrpb	73	92.262	Nannospalax_galili
ENSPKIG00000002865	snrpb	95	94.323	ENSNBRG00000006353	snrpb	87	94.323	Neolamprologus_brichardi
ENSPKIG00000002865	snrpb	70	94.048	ENSNLEG00000029067	SNRPB	70	92.814	Nomascus_leucogenys
ENSPKIG00000002865	snrpb	69	94.012	ENSMEUG00000015625	SNRPB	74	92.814	Notamacropus_eugenii
ENSPKIG00000002865	snrpb	92	89.091	ENSODEG00000004305	-	92	89.091	Octodon_degus
ENSPKIG00000002865	snrpb	70	88.690	ENSODEG00000016060	-	70	87.500	Octodon_degus
ENSPKIG00000002865	snrpb	99	96.639	ENSONIG00000000248	snrpb	99	96.639	Oreochromis_niloticus
ENSPKIG00000002865	snrpb	76	93.443	ENSOCUG00000014042	-	70	92.262	Oryctolagus_cuniculus
ENSPKIG00000002865	snrpb	74	87.151	ENSOCUG00000022423	-	86	88.690	Oryctolagus_cuniculus
ENSPKIG00000002865	snrpb	89	65.728	ENSOCUG00000026813	-	63	66.892	Oryctolagus_cuniculus
ENSPKIG00000002865	snrpb	89	91.080	ENSOCUG00000028215	-	70	90.476	Oryctolagus_cuniculus
ENSPKIG00000002865	snrpb	89	88.837	ENSOCUG00000021456	-	70	88.690	Oryctolagus_cuniculus
ENSPKIG00000002865	snrpb	74	97.143	ENSORLG00000021862	snrpb	69	98.193	Oryzias_latipes
ENSPKIG00000002865	snrpb	70	94.048	ENSOGAG00000016149	SNRPB	70	92.262	Otolemur_garnettii
ENSPKIG00000002865	snrpb	76	93.443	ENSOARG00000006740	SNRPB	73	92.857	Ovis_aries
ENSPKIG00000002865	snrpb	70	94.048	ENSPPAG00000036314	SNRPB	73	92.262	Pan_paniscus
ENSPKIG00000002865	snrpb	70	94.048	ENSPPRG00000003233	-	73	92.262	Panthera_pardus
ENSPKIG00000002865	snrpb	69	94.012	ENSPTIG00000007468	SNRPB	72	92.216	Panthera_tigris_altaica
ENSPKIG00000002865	snrpb	70	94.048	ENSPTRG00000013176	SNRPB	73	92.262	Pan_troglodytes
ENSPKIG00000002865	snrpb	70	94.048	ENSPANG00000020362	SNRPB	70	92.262	Papio_anubis
ENSPKIG00000002865	snrpb	99	96.234	ENSPSIG00000014125	SNRPB	98	96.234	Pelodiscus_sinensis
ENSPKIG00000002865	snrpb	74	95.455	ENSPMGG00000016349	snrpb	69	96.894	Periophthalmus_magnuspinnatus
ENSPKIG00000002865	snrpb	70	94.048	ENSPEMG00000007948	Snrpb	73	92.262	Peromyscus_maniculatus_bairdii
ENSPKIG00000002865	snrpb	69	93.413	ENSPCIG00000004694	SNRPB	69	91.617	Phascolarctos_cinereus
ENSPKIG00000002865	snrpb	70	94.048	ENSPPYG00000010841	SNRPB	73	92.262	Pongo_abelii
ENSPKIG00000002865	snrpb	70	94.048	ENSPCOG00000013686	SNRPB	73	92.262	Propithecus_coquereli
ENSPKIG00000002865	snrpb	70	92.857	ENSPVAG00000017013	SNRPB	59	91.071	Pteropus_vampyrus
ENSPKIG00000002865	snrpb	99	96.639	ENSPNYG00000014788	snrpb	99	96.639	Pundamilia_nyererei
ENSPKIG00000002865	snrpb	100	98.739	ENSPNAG00000016126	snrpb	100	98.739	Pygocentrus_nattereri
ENSPKIG00000002865	snrpb	70	94.048	ENSRNOG00000006961	Snrpb	73	100.000	Rattus_norvegicus
ENSPKIG00000002865	snrpb	70	94.048	ENSRBIG00000040505	SNRPB	73	92.262	Rhinopithecus_bieti
ENSPKIG00000002865	snrpb	70	94.048	ENSRROG00000036094	SNRPB	73	92.262	Rhinopithecus_roxellana
ENSPKIG00000002865	snrpb	70	94.048	ENSSBOG00000027310	SNRPB	73	92.262	Saimiri_boliviensis_boliviensis
ENSPKIG00000002865	snrpb	70	94.643	ENSSHAG00000010394	SNRPB	70	92.857	Sarcophilus_harrisii
ENSPKIG00000002865	snrpb	100	97.899	ENSSFOG00015002870	snrpb	100	97.899	Scleropages_formosus
ENSPKIG00000002865	snrpb	99	97.034	ENSSMAG00000006766	snrpb	99	97.034	Scophthalmus_maximus
ENSPKIG00000002865	snrpb	99	96.639	ENSSDUG00000018539	snrpb	99	96.639	Seriola_dumerili
ENSPKIG00000002865	snrpb	99	96.639	ENSSLDG00000022391	snrpb	99	96.639	Seriola_lalandi_dorsalis
ENSPKIG00000002865	snrpb	92	80.909	ENSSARG00000003084	SNRPB	94	80.909	Sorex_araneus
ENSPKIG00000002865	snrpb	99	96.234	ENSSPUG00000015659	SNRPB	100	96.234	Sphenodon_punctatus
ENSPKIG00000002865	snrpb	99	96.639	ENSSPAG00000021992	snrpb	99	96.639	Stegastes_partitus
ENSPKIG00000002865	snrpb	76	93.443	ENSSSCG00000040857	-	73	92.857	Sus_scrofa
ENSPKIG00000002865	snrpb	95	73.799	ENSSSCG00000011966	-	77	69.399	Sus_scrofa
ENSPKIG00000002865	snrpb	59	97.143	ENSTGUG00000005684	SNRPB	59	97.143	Taeniopygia_guttata
ENSPKIG00000002865	snrpb	95	96.916	ENSTRUG00000023094	snrpb	99	96.916	Takifugu_rubripes
ENSPKIG00000002865	snrpb	99	97.034	ENSTNIG00000002991	snrpb	99	97.034	Tetraodon_nigroviridis
ENSPKIG00000002865	snrpb	70	94.048	ENSUAMG00000005984	-	80	92.262	Ursus_americanus
ENSPKIG00000002865	snrpb	58	94.891	ENSUMAG00000002123	-	63	94.891	Ursus_maritimus
ENSPKIG00000002865	snrpb	100	72.500	ENSVVUG00000010086	-	71	75.595	Vulpes_vulpes
ENSPKIG00000002865	snrpb	70	93.452	ENSVVUG00000025654	-	70	92.262	Vulpes_vulpes
ENSPKIG00000002865	snrpb	63	98.000	ENSXETG00000027266	snrpb	63	98.000	Xenopus_tropicalis