EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000002895 (Gene tree)
Gene ID: 111848150
Gene Symbol: lsg1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 12493 bases
Position: chrPGUA01000178.1:923809-936301
Accession: 111848150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000016668	MMR_HSR1	PF01926.23	1.5e-13	1	1
ENSPKIP00000016696	MMR_HSR1	PF01926.23	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000041193	-	2232	-	ENSPKIP00000016696	633 (aa)	XP_023675700	UPI000CD641D3
ENSPKIT00000041164	-	1887	-	ENSPKIP00000016668	628 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000002895's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000002895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000002895	lsg1	100	64.157	ENSG00000041802	LSG1	85	80.132	Homo_sapiens
ENSPKIG00000002895	lsg1	99	71.362	ENSAPOG00000009694	lsg1	99	72.013	Acanthochromis_polyacanthus
ENSPKIG00000002895	lsg1	99	62.801	ENSAMEG00000009343	LSG1	97	62.906	Ailuropoda_melanoleuca
ENSPKIG00000002895	lsg1	98	72.903	ENSACIG00000012406	lsg1	99	71.719	Amphilophus_citrinellus
ENSPKIG00000002895	lsg1	99	73.028	ENSAOCG00000016066	lsg1	99	72.397	Amphiprion_ocellaris
ENSPKIG00000002895	lsg1	99	72.713	ENSAPEG00000003252	lsg1	99	72.082	Amphiprion_percula
ENSPKIG00000002895	lsg1	98	73.034	ENSATEG00000011794	lsg1	99	71.900	Anabas_testudineus
ENSPKIG00000002895	lsg1	95	61.637	ENSACAG00000004222	LSG1	99	60.450	Anolis_carolinensis
ENSPKIG00000002895	lsg1	100	63.705	ENSANAG00000021153	LSG1	96	64.890	Aotus_nancymaae
ENSPKIG00000002895	lsg1	99	72.366	ENSACLG00000000520	lsg1	99	71.210	Astatotilapia_calliptera
ENSPKIG00000002895	lsg1	99	70.795	ENSAMXG00000008271	lsg1	99	71.077	Astyanax_mexicanus
ENSPKIG00000002895	lsg1	100	65.706	ENSBTAG00000008461	LSG1	98	65.732	Bos_taurus
ENSPKIG00000002895	lsg1	77	34.356	WBGene00016907	C53H9.2	82	50.000	Caenorhabditis_elegans
ENSPKIG00000002895	lsg1	100	63.499	ENSCJAG00000013962	LSG1	96	64.734	Callithrix_jacchus
ENSPKIG00000002895	lsg1	95	63.537	ENSCAFG00000013445	LSG1	99	64.490	Canis_familiaris
ENSPKIG00000002895	lsg1	99	63.378	ENSCAFG00020002216	LSG1	99	64.423	Canis_lupus_dingo
ENSPKIG00000002895	lsg1	99	65.438	ENSCHIG00000015769	LSG1	97	65.669	Capra_hircus
ENSPKIG00000002895	lsg1	100	64.232	ENSTSYG00000001447	LSG1	98	64.253	Carlito_syrichta
ENSPKIG00000002895	lsg1	95	63.993	ENSCAPG00000009856	LSG1	100	64.368	Cavia_aperea
ENSPKIG00000002895	lsg1	100	62.594	ENSCCAG00000035744	LSG1	96	63.793	Cebus_capucinus
ENSPKIG00000002895	lsg1	100	64.759	ENSCATG00000042060	LSG1	96	63.339	Cercocebus_atys
ENSPKIG00000002895	lsg1	100	64.458	ENSCSAG00000008796	LSG1	88	65.415	Chlorocebus_sabaeus
ENSPKIG00000002895	lsg1	99	64.955	ENSCPBG00000015941	LSG1	83	64.955	Chrysemys_picta_bellii
ENSPKIG00000002895	lsg1	84	50.094	ENSCING00000007079	-	95	58.296	Ciona_intestinalis
ENSPKIG00000002895	lsg1	81	55.985	ENSCSAVG00000002514	-	93	58.850	Ciona_savignyi
ENSPKIG00000002895	lsg1	100	64.608	ENSCANG00000030709	LSG1	100	63.609	Colobus_angolensis_palliatus
ENSPKIG00000002895	lsg1	100	64.961	ENSCGRG00001019846	Lsg1	98	64.882	Cricetulus_griseus_chok1gshd
ENSPKIG00000002895	lsg1	100	64.580	ENSCGRG00000014617	Lsg1	98	64.882	Cricetulus_griseus_crigri
ENSPKIG00000002895	lsg1	98	71.930	ENSCSEG00000008522	lsg1	99	71.763	Cynoglossus_semilaevis
ENSPKIG00000002895	lsg1	97	74.309	ENSCVAG00000002484	lsg1	99	73.418	Cyprinodon_variegatus
ENSPKIG00000002895	lsg1	99	74.299	ENSDARG00000015352	lsg1	99	74.299	Danio_rerio
ENSPKIG00000002895	lsg1	100	64.492	ENSDNOG00000006224	LSG1	98	63.608	Dasypus_novemcinctus
ENSPKIG00000002895	lsg1	99	50.078	FBgn0266284	Ns3	95	50.408	Drosophila_melanogaster
ENSPKIG00000002895	lsg1	83	95.238	ENSETEG00000003888	LSG1	84	95.238	Echinops_telfairi
ENSPKIG00000002895	lsg1	89	56.131	ENSEBUG00000003119	lsg1	85	55.326	Eptatretus_burgeri
ENSPKIG00000002895	lsg1	100	63.378	ENSEASG00005000678	LSG1	98	64.087	Equus_asinus_asinus
ENSPKIG00000002895	lsg1	100	63.378	ENSECAG00000017659	LSG1	96	65.047	Equus_caballus
ENSPKIG00000002895	lsg1	86	62.185	ENSEEUG00000015217	LSG1	75	62.185	Erinaceus_europaeus
ENSPKIG00000002895	lsg1	99	69.531	ENSELUG00000023973	lsg1	99	68.594	Esox_lucius
ENSPKIG00000002895	lsg1	99	63.718	ENSFCAG00000024957	LSG1	97	64.341	Felis_catus
ENSPKIG00000002895	lsg1	93	60.714	ENSFALG00000007210	LSG1	94	61.264	Ficedula_albicollis
ENSPKIG00000002895	lsg1	100	64.087	ENSFDAG00000017373	LSG1	98	64.038	Fukomys_damarensis
ENSPKIG00000002895	lsg1	97	73.920	ENSFHEG00000003680	lsg1	99	73.832	Fundulus_heteroclitus
ENSPKIG00000002895	lsg1	85	77.826	ENSGMOG00000015834	lsg1	87	77.689	Gadus_morhua
ENSPKIG00000002895	lsg1	99	59.699	ENSGALG00000007058	LSG1	87	60.000	Gallus_gallus
ENSPKIG00000002895	lsg1	97	73.008	ENSGAFG00000015831	lsg1	99	72.785	Gambusia_affinis
ENSPKIG00000002895	lsg1	98	70.335	ENSGACG00000009323	lsg1	99	69.484	Gasterosteus_aculeatus
ENSPKIG00000002895	lsg1	100	64.006	ENSGGOG00000000520	LSG1	96	65.987	Gorilla_gorilla
ENSPKIG00000002895	lsg1	99	72.798	ENSHBUG00000005659	lsg1	99	71.938	Haplochromis_burtoni
ENSPKIG00000002895	lsg1	100	62.364	ENSHGLG00000017390	LSG1	97	63.565	Heterocephalus_glaber_female
ENSPKIG00000002895	lsg1	100	62.364	ENSHGLG00100018587	LSG1	97	63.565	Heterocephalus_glaber_male
ENSPKIG00000002895	lsg1	97	69.793	ENSHCOG00000016848	lsg1	99	69.099	Hippocampus_comes
ENSPKIG00000002895	lsg1	99	72.956	ENSIPUG00000008631	lsg1	99	73.270	Ictalurus_punctatus
ENSPKIG00000002895	lsg1	73	60.123	ENSSTOG00000010234	LSG1	90	60.700	Ictidomys_tridecemlineatus
ENSPKIG00000002895	lsg1	100	64.715	ENSJJAG00000015513	Lsg1	97	64.873	Jaculus_jaculus
ENSPKIG00000002895	lsg1	98	69.404	ENSKMAG00000009681	lsg1	99	68.661	Kryptolebias_marmoratus
ENSPKIG00000002895	lsg1	98	72.330	ENSLBEG00000024261	lsg1	99	72.310	Labrus_bergylta
ENSPKIG00000002895	lsg1	99	64.565	ENSLACG00000013399	LSG1	99	64.060	Latimeria_chalumnae
ENSPKIG00000002895	lsg1	98	70.388	ENSLOCG00000004918	lsg1	99	71.254	Lepisosteus_oculatus
ENSPKIG00000002895	lsg1	100	64.625	ENSLAFG00000012919	-	100	63.247	Loxodonta_africana
ENSPKIG00000002895	lsg1	100	64.350	ENSMFAG00000039903	LSG1	96	63.438	Macaca_fascicularis
ENSPKIG00000002895	lsg1	100	64.350	ENSMMUG00000010708	LSG1	96	65.156	Macaca_mulatta
ENSPKIG00000002895	lsg1	100	64.350	ENSMNEG00000031538	LSG1	96	63.281	Macaca_nemestrina
ENSPKIG00000002895	lsg1	100	64.091	ENSMLEG00000041184	LSG1	96	64.890	Mandrillus_leucophaeus
ENSPKIG00000002895	lsg1	99	70.561	ENSMAMG00000000470	lsg1	99	68.858	Mastacembelus_armatus
ENSPKIG00000002895	lsg1	99	72.952	ENSMZEG00005017865	lsg1	99	72.093	Maylandia_zebra
ENSPKIG00000002895	lsg1	89	61.017	ENSMGAG00000007050	LSG1	99	61.864	Meleagris_gallopavo
ENSPKIG00000002895	lsg1	97	60.572	ENSMAUG00000016976	Lsg1	96	60.720	Mesocricetus_auratus
ENSPKIG00000002895	lsg1	100	63.198	ENSMICG00000049087	LSG1	96	64.297	Microcebus_murinus
ENSPKIG00000002895	lsg1	100	63.678	ENSMOCG00000022136	Lsg1	98	63.836	Microtus_ochrogaster
ENSPKIG00000002895	lsg1	87	78.689	ENSMMOG00000008884	lsg1	99	68.354	Mola_mola
ENSPKIG00000002895	lsg1	98	55.077	ENSMODG00000019828	LSG1	97	54.474	Monodelphis_domestica
ENSPKIG00000002895	lsg1	100	64.110	MGP_CAROLIEiJ_G0020648	Lsg1	98	64.455	Mus_caroli
ENSPKIG00000002895	lsg1	100	63.775	ENSMUSG00000022538	Lsg1	98	64.873	Mus_musculus
ENSPKIG00000002895	lsg1	98	63.467	MGP_PahariEiJ_G0016352	Lsg1	100	63.804	Mus_pahari
ENSPKIG00000002895	lsg1	100	63.158	MGP_SPRETEiJ_G0021544	Lsg1	98	65.190	Mus_spretus
ENSPKIG00000002895	lsg1	99	63.158	ENSMPUG00000003734	LSG1	97	62.986	Mustela_putorius_furo
ENSPKIG00000002895	lsg1	99	64.168	ENSMLUG00000012548	LSG1	99	63.415	Myotis_lucifugus
ENSPKIG00000002895	lsg1	100	63.441	ENSNGAG00000021872	Lsg1	97	63.722	Nannospalax_galili
ENSPKIG00000002895	lsg1	100	64.060	ENSNLEG00000008293	LSG1	96	65.312	Nomascus_leucogenys
ENSPKIG00000002895	lsg1	69	67.010	ENSMEUG00000009041	-	83	67.010	Notamacropus_eugenii
ENSPKIG00000002895	lsg1	99	72.504	ENSONIG00000002635	lsg1	99	71.407	Oreochromis_niloticus
ENSPKIG00000002895	lsg1	95	64.668	ENSOANG00000012742	LSG1	99	64.553	Ornithorhynchus_anatinus
ENSPKIG00000002895	lsg1	100	63.338	ENSOCUG00000004817	LSG1	98	64.055	Oryctolagus_cuniculus
ENSPKIG00000002895	lsg1	98	72.492	ENSORLG00000007695	lsg1	99	70.886	Oryzias_latipes
ENSPKIG00000002895	lsg1	98	72.742	ENSORLG00020016286	lsg1	99	72.082	Oryzias_latipes_hni
ENSPKIG00000002895	lsg1	98	72.258	ENSORLG00015012025	lsg1	99	71.677	Oryzias_latipes_hsok
ENSPKIG00000002895	lsg1	98	71.729	ENSOMEG00000022379	lsg1	99	70.300	Oryzias_melastigma
ENSPKIG00000002895	lsg1	100	62.481	ENSOGAG00000003475	LSG1	96	63.950	Otolemur_garnettii
ENSPKIG00000002895	lsg1	99	65.099	ENSOARG00000020403	LSG1	97	65.265	Ovis_aries
ENSPKIG00000002895	lsg1	100	64.404	ENSPPAG00000029271	LSG1	96	65.361	Pan_paniscus
ENSPKIG00000002895	lsg1	99	62.908	ENSPPRG00000010281	LSG1	97	63.650	Panthera_pardus
ENSPKIG00000002895	lsg1	99	63.718	ENSPTIG00000010789	LSG1	97	64.496	Panthera_tigris_altaica
ENSPKIG00000002895	lsg1	100	64.253	ENSPTRG00000015760	LSG1	96	65.204	Pan_troglodytes
ENSPKIG00000002895	lsg1	100	64.199	ENSPANG00000018249	LSG1	96	63.281	Papio_anubis
ENSPKIG00000002895	lsg1	95	60.987	ENSPSIG00000009821	LSG1	99	60.766	Pelodiscus_sinensis
ENSPKIG00000002895	lsg1	95	71.100	ENSPMGG00000000931	lsg1	99	70.608	Periophthalmus_magnuspinnatus
ENSPKIG00000002895	lsg1	100	63.939	ENSPEMG00000012082	-	98	63.736	Peromyscus_maniculatus_bairdii
ENSPKIG00000002895	lsg1	99	60.896	ENSPMAG00000007451	lsg1	99	60.060	Petromyzon_marinus
ENSPKIG00000002895	lsg1	99	64.615	ENSPCIG00000013890	LSG1	82	64.615	Phascolarctos_cinereus
ENSPKIG00000002895	lsg1	97	73.836	ENSPFOG00000021882	lsg1	99	72.969	Poecilia_formosa
ENSPKIG00000002895	lsg1	97	73.034	ENSPLAG00000019536	lsg1	99	72.188	Poecilia_latipinna
ENSPKIG00000002895	lsg1	97	72.800	ENSPMEG00000017281	lsg1	99	71.963	Poecilia_mexicana
ENSPKIG00000002895	lsg1	97	63.823	ENSPREG00000006048	lsg1	99	62.769	Poecilia_reticulata
ENSPKIG00000002895	lsg1	92	62.890	ENSPPYG00000014425	LSG1	96	63.761	Pongo_abelii
ENSPKIG00000002895	lsg1	78	92.857	ENSPCAG00000005511	LSG1	64	92.857	Procavia_capensis
ENSPKIG00000002895	lsg1	100	62.632	ENSPCOG00000012360	LSG1	96	63.191	Propithecus_coquereli
ENSPKIG00000002895	lsg1	99	72.366	ENSPNYG00000021994	lsg1	99	71.210	Pundamilia_nyererei
ENSPKIG00000002895	lsg1	99	71.319	ENSPNAG00000015533	lsg1	99	70.353	Pygocentrus_nattereri
ENSPKIG00000002895	lsg1	100	63.636	ENSRNOG00000001727	Lsg1	98	64.798	Rattus_norvegicus
ENSPKIG00000002895	lsg1	100	63.404	ENSRBIG00000029053	LSG1	96	64.678	Rhinopithecus_bieti
ENSPKIG00000002895	lsg1	100	63.404	ENSRROG00000037702	LSG1	96	64.678	Rhinopithecus_roxellana
ENSPKIG00000002895	lsg1	77	41.948	YGL099W	LSG1	70	40.755	Saccharomyces_cerevisiae
ENSPKIG00000002895	lsg1	100	64.006	ENSSBOG00000034938	LSG1	96	65.204	Saimiri_boliviensis_boliviensis
ENSPKIG00000002895	lsg1	78	60.345	ENSSHAG00000003487	LSG1	99	59.847	Sarcophilus_harrisii
ENSPKIG00000002895	lsg1	98	76.320	ENSSFOG00015008955	lsg1	99	75.430	Scleropages_formosus
ENSPKIG00000002895	lsg1	98	72.727	ENSSDUG00000004622	lsg1	99	72.222	Seriola_dumerili
ENSPKIG00000002895	lsg1	98	73.955	ENSSLDG00000010869	lsg1	99	72.327	Seriola_lalandi_dorsalis
ENSPKIG00000002895	lsg1	82	65.982	ENSSARG00000012981	LSG1	81	64.426	Sorex_araneus
ENSPKIG00000002895	lsg1	99	64.947	ENSSPUG00000016347	LSG1	99	64.340	Sphenodon_punctatus
ENSPKIG00000002895	lsg1	99	70.440	ENSSPAG00000005508	lsg1	99	70.440	Stegastes_partitus
ENSPKIG00000002895	lsg1	99	62.997	ENSSSCG00000011827	LSG1	97	63.191	Sus_scrofa
ENSPKIG00000002895	lsg1	89	58.794	ENSTGUG00000009068	LSG1	99	59.365	Taeniopygia_guttata
ENSPKIG00000002895	lsg1	97	65.605	ENSTRUG00000017380	lsg1	99	66.147	Takifugu_rubripes
ENSPKIG00000002895	lsg1	97	71.337	ENSTNIG00000015570	lsg1	99	70.846	Tetraodon_nigroviridis
ENSPKIG00000002895	lsg1	91	72.881	ENSTTRG00000000559	LSG1	89	72.881	Tursiops_truncatus
ENSPKIG00000002895	lsg1	99	63.363	ENSUAMG00000012454	LSG1	97	63.777	Ursus_americanus
ENSPKIG00000002895	lsg1	99	63.363	ENSUMAG00000000855	LSG1	97	63.777	Ursus_maritimus
ENSPKIG00000002895	lsg1	95	61.173	ENSVPAG00000012400	LSG1	99	60.128	Vicugna_pacos
ENSPKIG00000002895	lsg1	95	63.349	ENSVVUG00000008956	LSG1	98	63.125	Vulpes_vulpes
ENSPKIG00000002895	lsg1	99	66.144	ENSXETG00000003451	lsg1	100	65.204	Xenopus_tropicalis
ENSPKIG00000002895	lsg1	97	73.312	ENSXCOG00000003239	lsg1	99	71.875	Xiphophorus_couchianus
ENSPKIG00000002895	lsg1	97	72.123	ENSXMAG00000005536	lsg1	99	71.101	Xiphophorus_maculatus