EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000002901 (Gene tree)
Gene ID: 111837636
Gene Symbol: ddx42
Alias: -
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 17487 bases
Position: chrPGUA01000607.1:100733-118219
Accession: 111837636
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000016715	ResIII	PF04851.15	1.5e-06	1	1
ENSPKIP00000016756	ResIII	PF04851.15	1.8e-06	1	1
ENSPKIP00000016756	DEAD	PF00270.29	1.4e-48	1	1
ENSPKIP00000016715	DEAD	PF00270.29	1.4e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000041256	-	2562	-	ENSPKIP00000016756	853 (aa)	-	-
ENSPKIT00000041212	-	5401	-	ENSPKIP00000016715	865 (aa)	XP_023655625	UPI000CD61D69

Gene Model

Click here to download ENSPKIG00000002901's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000002901's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000002901	ddx42	50	42.958	ENSPKIG00000002575	si:dkey-156n14.5	63	42.958
ENSPKIG00000002901	ddx42	63	41.062	ENSPKIG00000010351	ddx46	59	38.756
ENSPKIG00000002901	ddx42	50	42.254	ENSPKIG00000007831	DDX17	77	38.921
ENSPKIG00000002901	ddx42	53	37.421	ENSPKIG00000004320	-	80	37.029
ENSPKIG00000002901	ddx42	50	41.348	ENSPKIG00000007704	DDX41	79	37.736
ENSPKIG00000002901	ddx42	51	38.022	ENSPKIG00000002941	ddx43	70	37.022
ENSPKIG00000002901	ddx42	50	42.857	ENSPKIG00000007686	ddx5	87	38.069
ENSPKIG00000002901	ddx42	53	37.554	ENSPKIG00000003617	ddx3xa	79	36.680
ENSPKIG00000002901	ddx42	50	42.593	ENSPKIG00000006762	DDX5	81	43.646
ENSPKIG00000002901	ddx42	53	30.519	ENSPKIG00000004361	ddx59	72	30.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000002901	ddx42	99	69.989	ENSG00000198231	DDX42	98	76.531	Homo_sapiens
ENSPKIG00000002901	ddx42	97	82.214	ENSAPOG00000017675	ddx42	99	80.670	Acanthochromis_polyacanthus
ENSPKIG00000002901	ddx42	100	70.000	ENSAMEG00000003200	DDX42	100	69.649	Ailuropoda_melanoleuca
ENSPKIG00000002901	ddx42	100	75.832	ENSAOCG00000003520	ddx42	100	78.308	Amphiprion_ocellaris
ENSPKIG00000002901	ddx42	100	76.483	ENSAPEG00000000984	ddx42	100	79.630	Amphiprion_percula
ENSPKIG00000002901	ddx42	100	76.874	ENSATEG00000022920	ddx42	100	77.754	Anabas_testudineus
ENSPKIG00000002901	ddx42	100	69.716	ENSAPLG00000010544	DDX42	80	82.423	Anas_platyrhynchos
ENSPKIG00000002901	ddx42	99	71.183	ENSACAG00000003994	DDX42	99	70.525	Anolis_carolinensis
ENSPKIG00000002901	ddx42	99	70.878	ENSANAG00000035693	DDX42	88	83.573	Aotus_nancymaae
ENSPKIG00000002901	ddx42	96	81.360	ENSACLG00000025113	ddx42	100	78.233	Astatotilapia_calliptera
ENSPKIG00000002901	ddx42	92	81.663	ENSAMXG00000011435	ddx42	100	76.030	Astyanax_mexicanus
ENSPKIG00000002901	ddx42	100	69.836	ENSBTAG00000021058	DDX42	100	70.321	Bos_taurus
ENSPKIG00000002901	ddx42	69	53.302	WBGene00008119	C46F11.4	79	54.321	Caenorhabditis_elegans
ENSPKIG00000002901	ddx42	99	70.664	ENSCJAG00000019649	DDX42	97	81.891	Callithrix_jacchus
ENSPKIG00000002901	ddx42	100	69.304	ENSCAFG00000012818	DDX42	90	74.446	Canis_familiaris
ENSPKIG00000002901	ddx42	100	69.409	ENSCAFG00020026631	DDX42	90	74.562	Canis_lupus_dingo
ENSPKIG00000002901	ddx42	100	71.568	ENSCHIG00000014431	DDX42	100	71.820	Capra_hircus
ENSPKIG00000002901	ddx42	100	69.758	ENSTSYG00000001380	DDX42	100	70.075	Carlito_syrichta
ENSPKIG00000002901	ddx42	75	61.705	ENSCAPG00000013621	DDX42	82	64.191	Cavia_aperea
ENSPKIG00000002901	ddx42	100	70.279	ENSCPOG00000005633	DDX42	100	70.494	Cavia_porcellus
ENSPKIG00000002901	ddx42	100	65.602	ENSCCAG00000020612	DDX42	87	83.573	Cebus_capucinus
ENSPKIG00000002901	ddx42	99	71.075	ENSCATG00000030490	DDX42	100	69.362	Cercocebus_atys
ENSPKIG00000002901	ddx42	100	70.909	ENSCLAG00000003497	DDX42	100	70.588	Chinchilla_lanigera
ENSPKIG00000002901	ddx42	99	66.631	ENSCSAG00000003914	DDX42	80	77.778	Chlorocebus_sabaeus
ENSPKIG00000002901	ddx42	66	90.385	ENSCHOG00000006241	DDX42	61	90.385	Choloepus_hoffmanni
ENSPKIG00000002901	ddx42	99	68.926	ENSCPBG00000026682	DDX42	79	81.891	Chrysemys_picta_bellii
ENSPKIG00000002901	ddx42	50	68.150	ENSCING00000001837	-	94	68.150	Ciona_intestinalis
ENSPKIG00000002901	ddx42	99	71.075	ENSCANG00000034663	DDX42	89	83.651	Colobus_angolensis_palliatus
ENSPKIG00000002901	ddx42	100	70.878	ENSCGRG00001009775	Ddx42	100	71.092	Cricetulus_griseus_chok1gshd
ENSPKIG00000002901	ddx42	100	70.878	ENSCGRG00000011718	Ddx42	100	71.092	Cricetulus_griseus_crigri
ENSPKIG00000002901	ddx42	97	81.116	ENSCSEG00000021574	ddx42	100	75.685	Cynoglossus_semilaevis
ENSPKIG00000002901	ddx42	100	75.515	ENSCVAG00000011404	ddx42	100	77.008	Cyprinodon_variegatus
ENSPKIG00000002901	ddx42	100	78.384	ENSDARG00000037928	ddx42	100	78.493	Danio_rerio
ENSPKIG00000002901	ddx42	99	69.222	ENSDNOG00000007961	DDX42	77	83.357	Dasypus_novemcinctus
ENSPKIG00000002901	ddx42	99	63.704	ENSDORG00000004199	Ddx42	100	63.119	Dipodomys_ordii
ENSPKIG00000002901	ddx42	71	61.389	FBgn0036104	CG6418	84	59.220	Drosophila_melanogaster
ENSPKIG00000002901	ddx42	88	71.410	ENSEBUG00000001155	ddx42	88	73.699	Eptatretus_burgeri
ENSPKIG00000002901	ddx42	100	70.621	ENSEASG00005013089	DDX42	89	83.228	Equus_asinus_asinus
ENSPKIG00000002901	ddx42	100	69.231	ENSECAG00000022684	DDX42	100	69.862	Equus_caballus
ENSPKIG00000002901	ddx42	62	96.970	ENSEEUG00000009144	DDX42	73	96.970	Erinaceus_europaeus
ENSPKIG00000002901	ddx42	100	78.075	ENSELUG00000020593	ddx42	100	77.063	Esox_lucius
ENSPKIG00000002901	ddx42	99	69.377	ENSFCAG00000003499	DDX42	100	69.723	Felis_catus
ENSPKIG00000002901	ddx42	97	74.112	ENSFALG00000004675	DDX42	66	82.024	Ficedula_albicollis
ENSPKIG00000002901	ddx42	100	69.263	ENSFDAG00000020516	DDX42	100	69.694	Fukomys_damarensis
ENSPKIG00000002901	ddx42	100	75.108	ENSFHEG00000023290	ddx42	100	77.143	Fundulus_heteroclitus
ENSPKIG00000002901	ddx42	82	82.062	ENSGMOG00000004595	ddx42	85	81.921	Gadus_morhua
ENSPKIG00000002901	ddx42	100	69.770	ENSGALG00000000581	DDX42	79	82.423	Gallus_gallus
ENSPKIG00000002901	ddx42	95	77.586	ENSGAFG00000011846	ddx42	97	79.091	Gambusia_affinis
ENSPKIG00000002901	ddx42	100	72.905	ENSGACG00000009782	ddx42	100	73.289	Gasterosteus_aculeatus
ENSPKIG00000002901	ddx42	100	68.822	ENSGAGG00000024411	DDX42	78	81.491	Gopherus_agassizii
ENSPKIG00000002901	ddx42	99	70.999	ENSGGOG00000006779	DDX42	87	83.573	Gorilla_gorilla
ENSPKIG00000002901	ddx42	96	81.360	ENSHBUG00000008705	ddx42	100	78.341	Haplochromis_burtoni
ENSPKIG00000002901	ddx42	99	66.490	ENSHGLG00000010024	DDX42	100	66.167	Heterocephalus_glaber_female
ENSPKIG00000002901	ddx42	90	57.861	ENSHGLG00100007138	-	84	57.603	Heterocephalus_glaber_male
ENSPKIG00000002901	ddx42	96	75.355	ENSHGLG00100004479	-	100	69.442	Heterocephalus_glaber_male
ENSPKIG00000002901	ddx42	100	77.136	ENSHCOG00000003357	ddx42	100	77.855	Hippocampus_comes
ENSPKIG00000002901	ddx42	100	77.363	ENSIPUG00000013327	ddx42	100	79.070	Ictalurus_punctatus
ENSPKIG00000002901	ddx42	99	70.406	ENSSTOG00000008922	DDX42	100	69.797	Ictidomys_tridecemlineatus
ENSPKIG00000002901	ddx42	100	71.212	ENSJJAG00000011727	Ddx42	100	70.996	Jaculus_jaculus
ENSPKIG00000002901	ddx42	100	76.344	ENSKMAG00000009914	ddx42	100	77.923	Kryptolebias_marmoratus
ENSPKIG00000002901	ddx42	93	78.695	ENSLBEG00000004687	ddx42	100	73.549	Labrus_bergylta
ENSPKIG00000002901	ddx42	99	71.568	ENSLACG00000013476	DDX42	97	72.155	Latimeria_chalumnae
ENSPKIG00000002901	ddx42	100	77.909	ENSLOCG00000011764	ddx42	100	77.802	Lepisosteus_oculatus
ENSPKIG00000002901	ddx42	100	70.802	ENSLAFG00000003249	DDX42	100	69.989	Loxodonta_africana
ENSPKIG00000002901	ddx42	100	70.999	ENSMFAG00000031356	DDX42	100	69.362	Macaca_fascicularis
ENSPKIG00000002901	ddx42	99	71.305	ENSMMUG00000016762	DDX42	100	69.584	Macaca_mulatta
ENSPKIG00000002901	ddx42	100	70.999	ENSMNEG00000038250	DDX42	100	69.362	Macaca_nemestrina
ENSPKIG00000002901	ddx42	99	69.958	ENSMLEG00000043080	DDX42	100	67.018	Mandrillus_leucophaeus
ENSPKIG00000002901	ddx42	96	81.360	ENSMZEG00005023103	ddx42	100	78.233	Maylandia_zebra
ENSPKIG00000002901	ddx42	99	70.074	ENSMGAG00000001822	DDX42	79	82.423	Meleagris_gallopavo
ENSPKIG00000002901	ddx42	81	76.356	ENSMAUG00000020774	-	83	84.051	Mesocricetus_auratus
ENSPKIG00000002901	ddx42	100	70.343	ENSMICG00000009952	DDX42	100	70.021	Microcebus_murinus
ENSPKIG00000002901	ddx42	99	71.305	ENSMOCG00000015504	Ddx42	100	70.905	Microtus_ochrogaster
ENSPKIG00000002901	ddx42	93	77.187	ENSMMOG00000016963	ddx42	76	83.824	Mola_mola
ENSPKIG00000002901	ddx42	54	83.974	ENSMODG00000009917	-	98	83.974	Monodelphis_domestica
ENSPKIG00000002901	ddx42	100	77.233	ENSMALG00000007800	ddx42	100	78.947	Monopterus_albus
ENSPKIG00000002901	ddx42	99	70.170	MGP_CAROLIEiJ_G0017314	Ddx42	100	70.362	Mus_caroli
ENSPKIG00000002901	ddx42	99	70.708	ENSMUSG00000020705	Ddx42	100	70.771	Mus_musculus
ENSPKIG00000002901	ddx42	78	84.866	MGP_PahariEiJ_G0018444	-	95	84.970	Mus_pahari
ENSPKIG00000002901	ddx42	99	70.708	MGP_SPRETEiJ_G0018158	Ddx42	100	70.557	Mus_spretus
ENSPKIG00000002901	ddx42	97	75.088	ENSMPUG00000014921	DDX42	100	69.492	Mustela_putorius_furo
ENSPKIG00000002901	ddx42	95	74.912	ENSMLUG00000011645	DDX42	100	68.416	Myotis_lucifugus
ENSPKIG00000002901	ddx42	99	70.501	ENSNGAG00000021897	Ddx42	100	70.936	Nannospalax_galili
ENSPKIG00000002901	ddx42	96	80.188	ENSNBRG00000004466	ddx42	100	77.155	Neolamprologus_brichardi
ENSPKIG00000002901	ddx42	100	70.288	ENSNLEG00000004248	DDX42	89	83.573	Nomascus_leucogenys
ENSPKIG00000002901	ddx42	68	70.719	ENSMEUG00000013227	-	71	70.719	Notamacropus_eugenii
ENSPKIG00000002901	ddx42	100	70.351	ENSOPRG00000014960	DDX42	100	69.713	Ochotona_princeps
ENSPKIG00000002901	ddx42	100	67.380	ENSODEG00000007810	DDX42	100	67.059	Octodon_degus
ENSPKIG00000002901	ddx42	96	82.367	ENSONIG00000000734	ddx42	100	78.341	Oreochromis_niloticus
ENSPKIG00000002901	ddx42	62	83.148	ENSOANG00000000265	DDX42	100	83.148	Ornithorhynchus_anatinus
ENSPKIG00000002901	ddx42	100	76.541	ENSORLG00000002395	ddx42	100	76.760	Oryzias_latipes
ENSPKIG00000002901	ddx42	100	76.674	ENSORLG00020011621	ddx42	100	77.558	Oryzias_latipes_hni
ENSPKIG00000002901	ddx42	100	76.242	ENSORLG00015004487	ddx42	100	77.228	Oryzias_latipes_hsok
ENSPKIG00000002901	ddx42	96	82.640	ENSOMEG00000020093	ddx42	100	78.462	Oryzias_melastigma
ENSPKIG00000002901	ddx42	100	69.639	ENSOGAG00000006872	DDX42	100	69.819	Otolemur_garnettii
ENSPKIG00000002901	ddx42	100	69.433	ENSOARG00000013540	DDX42	100	69.433	Ovis_aries
ENSPKIG00000002901	ddx42	99	70.999	ENSPPAG00000007496	DDX42	100	69.733	Pan_paniscus
ENSPKIG00000002901	ddx42	99	69.377	ENSPPRG00000002740	DDX42	100	69.723	Panthera_pardus
ENSPKIG00000002901	ddx42	100	69.198	ENSPTIG00000009932	DDX42	100	69.616	Panthera_tigris_altaica
ENSPKIG00000002901	ddx42	99	70.999	ENSPTRG00000009523	DDX42	100	69.733	Pan_troglodytes
ENSPKIG00000002901	ddx42	99	71.183	ENSPANG00000020990	DDX42	100	69.468	Papio_anubis
ENSPKIG00000002901	ddx42	91	79.114	ENSPSIG00000010289	DDX42	91	82.024	Pelodiscus_sinensis
ENSPKIG00000002901	ddx42	97	76.878	ENSPMGG00000009323	ddx42	100	74.640	Periophthalmus_magnuspinnatus
ENSPKIG00000002901	ddx42	99	70.847	ENSPEMG00000006755	Ddx42	100	70.394	Peromyscus_maniculatus_bairdii
ENSPKIG00000002901	ddx42	86	71.166	ENSPMAG00000005580	ddx42	94	73.167	Petromyzon_marinus
ENSPKIG00000002901	ddx42	100	69.799	ENSPCIG00000009093	DDX42	100	68.849	Phascolarctos_cinereus
ENSPKIG00000002901	ddx42	100	75.641	ENSPFOG00000014104	ddx42	100	76.931	Poecilia_formosa
ENSPKIG00000002901	ddx42	100	75.321	ENSPLAG00000010522	ddx42	100	76.609	Poecilia_latipinna
ENSPKIG00000002901	ddx42	100	74.023	ENSPMEG00000010744	ddx42	100	76.489	Poecilia_mexicana
ENSPKIG00000002901	ddx42	100	72.414	ENSPREG00000009926	ddx42	100	75.000	Poecilia_reticulata
ENSPKIG00000002901	ddx42	99	68.038	ENSPPYG00000008531	DDX42	79	79.627	Pongo_abelii
ENSPKIG00000002901	ddx42	92	64.800	ENSPCAG00000002474	DDX42	100	64.686	Procavia_capensis
ENSPKIG00000002901	ddx42	99	61.263	ENSPCOG00000001559	DDX42	86	76.898	Propithecus_coquereli
ENSPKIG00000002901	ddx42	100	67.800	ENSPVAG00000000160	DDX42	77	81.502	Pteropus_vampyrus
ENSPKIG00000002901	ddx42	80	79.831	ENSPNYG00000013954	ddx42	97	76.117	Pundamilia_nyererei
ENSPKIG00000002901	ddx42	97	77.124	ENSPNAG00000017352	ddx42	100	76.533	Pygocentrus_nattereri
ENSPKIG00000002901	ddx42	99	69.989	ENSRNOG00000009474	Ddx42	100	70.557	Rattus_norvegicus
ENSPKIG00000002901	ddx42	99	70.968	ENSRBIG00000004781	DDX42	89	83.651	Rhinopithecus_bieti
ENSPKIG00000002901	ddx42	99	71.075	ENSRROG00000029794	DDX42	100	69.362	Rhinopithecus_roxellana
ENSPKIG00000002901	ddx42	99	70.954	ENSSBOG00000029624	DDX42	100	70.664	Saimiri_boliviensis_boliviensis
ENSPKIG00000002901	ddx42	69	47.519	ENSSHAG00000007919	-	64	59.326	Sarcophilus_harrisii
ENSPKIG00000002901	ddx42	100	69.799	ENSSHAG00000012896	-	100	68.955	Sarcophilus_harrisii
ENSPKIG00000002901	ddx42	90	91.399	ENSSFOG00015014064	ddx42	83	91.271	Scleropages_formosus
ENSPKIG00000002901	ddx42	100	75.484	ENSSMAG00000009077	ddx42	100	76.892	Scophthalmus_maximus
ENSPKIG00000002901	ddx42	100	77.826	ENSSDUG00000022221	ddx42	100	78.775	Seriola_dumerili
ENSPKIG00000002901	ddx42	100	77.031	ENSSLDG00000018483	ddx42	100	77.753	Seriola_lalandi_dorsalis
ENSPKIG00000002901	ddx42	100	69.681	ENSSARG00000009847	DDX42	100	69.616	Sorex_araneus
ENSPKIG00000002901	ddx42	99	70.626	ENSSPUG00000018806	DDX42	99	70.771	Sphenodon_punctatus
ENSPKIG00000002901	ddx42	97	81.075	ENSSPAG00000013055	ddx42	100	78.665	Stegastes_partitus
ENSPKIG00000002901	ddx42	81	76.062	ENSSSCG00000017289	DDX42	73	84.184	Sus_scrofa
ENSPKIG00000002901	ddx42	100	70.181	ENSTGUG00000001931	DDX42	100	70.138	Taeniopygia_guttata
ENSPKIG00000002901	ddx42	100	76.211	ENSTRUG00000010711	ddx42	99	86.161	Takifugu_rubripes
ENSPKIG00000002901	ddx42	87	76.831	ENSTBEG00000010159	DDX42	98	76.831	Tupaia_belangeri
ENSPKIG00000002901	ddx42	100	69.442	ENSTTRG00000006962	DDX42	100	69.574	Tursiops_truncatus
ENSPKIG00000002901	ddx42	100	70.394	ENSUAMG00000007321	DDX42	100	69.755	Ursus_americanus
ENSPKIG00000002901	ddx42	100	70.267	ENSUMAG00000017438	DDX42	100	69.626	Ursus_maritimus
ENSPKIG00000002901	ddx42	91	73.387	ENSVPAG00000009633	DDX42	94	70.946	Vicugna_pacos
ENSPKIG00000002901	ddx42	100	69.620	ENSVVUG00000006095	DDX42	100	69.510	Vulpes_vulpes
ENSPKIG00000002901	ddx42	100	69.488	ENSXETG00000003245	ddx42	100	69.488	Xenopus_tropicalis
ENSPKIG00000002901	ddx42	84	76.478	ENSXCOG00000017560	ddx42	97	79.188	Xiphophorus_couchianus
ENSPKIG00000002901	ddx42	100	76.873	ENSXMAG00000008138	ddx42	100	78.524	Xiphophorus_maculatus