EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000002905 (Gene tree)
Gene ID: 111860727
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 1306 bases
Position: chrPGUA01004072.1:1-1306
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000016691	RRM_1	PF00076.22	1.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000041187	-	438	-	ENSPKIP00000016691	146 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000002905's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03013	RNA transport	KEGG
pki03015	mRNA surveillance pathway	KEGG
pki03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000002905's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000002905	-	79	36.986	ENSPKIG00000003894	ELAVL1	51	34.177
ENSPKIG00000002905	-	78	34.177	ENSPKIG00000023897	-	73	34.177
ENSPKIG00000002905	-	88	77.143	ENSPKIG00000016835	-	53	77.143
ENSPKIG00000002905	-	77	30.769	ENSPKIG00000006999	elavl4	61	30.769
ENSPKIG00000002905	-	58	32.979	ENSPKIG00000012311	sf3b6	74	32.979
ENSPKIG00000002905	-	77	30.769	ENSPKIG00000006187	ELAVL2	66	30.769
ENSPKIG00000002905	-	53	31.646	ENSPKIG00000016810	-	56	31.646
ENSPKIG00000002905	-	77	32.308	ENSPKIG00000001903	-	70	32.308
ENSPKIG00000002905	-	54	35.000	ENSPKIG00000024430	CIRBP	66	35.000
ENSPKIG00000002905	-	88	71.094	ENSPKIG00000025356	pabpc4	59	71.094
ENSPKIG00000002905	-	94	75.781	ENSPKIG00000005676	pabpc1b	59	75.781
ENSPKIG00000002905	-	100	100.000	ENSPKIG00000002089	-	100	100.000
ENSPKIG00000002905	-	88	66.406	ENSPKIG00000007322	pabpc1l	57	66.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000002905	-	94	75.000	ENSG00000151846	PABPC3	59	75.000	Homo_sapiens
ENSPKIG00000002905	-	94	77.344	ENSG00000070756	PABPC1	97	77.143	Homo_sapiens
ENSPKIG00000002905	-	94	77.344	ENSAMEG00000000348	PABPC1	58	77.344	Ailuropoda_melanoleuca
ENSPKIG00000002905	-	94	78.125	ENSAPLG00000001129	PABPC1	51	78.125	Anas_platyrhynchos
ENSPKIG00000002905	-	94	60.606	ENSACAG00000016470	PABPC1	61	60.606	Anolis_carolinensis
ENSPKIG00000002905	-	94	77.344	ENSANAG00000033352	-	58	77.344	Aotus_nancymaae
ENSPKIG00000002905	-	88	70.312	ENSANAG00000027730	-	57	70.312	Aotus_nancymaae
ENSPKIG00000002905	-	94	72.816	ENSANAG00000019222	-	62	66.379	Aotus_nancymaae
ENSPKIG00000002905	-	94	78.906	ENSAMXG00000018395	-	64	78.906	Astyanax_mexicanus
ENSPKIG00000002905	-	94	77.344	ENSBTAG00000046358	PABPC1	58	77.344	Bos_taurus
ENSPKIG00000002905	-	94	77.344	ENSCJAG00000015833	PABPC1	58	77.344	Callithrix_jacchus
ENSPKIG00000002905	-	94	72.441	ENSCJAG00000045282	-	67	72.441	Callithrix_jacchus
ENSPKIG00000002905	-	94	74.219	ENSCJAG00000041162	-	75	74.219	Callithrix_jacchus
ENSPKIG00000002905	-	94	77.344	ENSCAFG00000000567	PABPC1	58	77.344	Canis_familiaris
ENSPKIG00000002905	-	94	77.344	ENSCAFG00020000440	PABPC1	58	77.344	Canis_lupus_dingo
ENSPKIG00000002905	-	94	77.344	ENSCHIG00000023714	PABPC1	92	80.392	Capra_hircus
ENSPKIG00000002905	-	88	74.219	ENSTSYG00000033737	-	73	74.219	Carlito_syrichta
ENSPKIG00000002905	-	88	66.406	ENSTSYG00000037130	-	86	66.406	Carlito_syrichta
ENSPKIG00000002905	-	94	77.344	ENSTSYG00000004229	PABPC1	58	77.344	Carlito_syrichta
ENSPKIG00000002905	-	94	77.344	ENSCAPG00000013098	PABPC1	52	77.344	Cavia_aperea
ENSPKIG00000002905	-	94	77.344	ENSCPOG00000012917	PABPC1	50	77.344	Cavia_porcellus
ENSPKIG00000002905	-	94	74.219	ENSCCAG00000037208	PABPC3	60	74.219	Cebus_capucinus
ENSPKIG00000002905	-	94	77.344	ENSCCAG00000037733	-	70	77.344	Cebus_capucinus
ENSPKIG00000002905	-	94	69.531	ENSCCAG00000031444	-	57	69.531	Cebus_capucinus
ENSPKIG00000002905	-	94	73.438	ENSCCAG00000031750	-	65	73.438	Cebus_capucinus
ENSPKIG00000002905	-	94	66.406	ENSCCAG00000028512	-	68	66.406	Cebus_capucinus
ENSPKIG00000002905	-	94	76.562	ENSCATG00000029313	PABPC3	59	76.562	Cercocebus_atys
ENSPKIG00000002905	-	94	77.344	ENSCATG00000039184	PABPC1	58	77.344	Cercocebus_atys
ENSPKIG00000002905	-	88	66.406	ENSCATG00000044984	-	55	66.406	Cercocebus_atys
ENSPKIG00000002905	-	94	77.344	ENSCLAG00000009676	PABPC1	51	77.344	Chinchilla_lanigera
ENSPKIG00000002905	-	94	77.344	ENSCSAG00000012017	PABPC1	58	77.344	Chlorocebus_sabaeus
ENSPKIG00000002905	-	94	75.781	ENSCPBG00000005782	PABPC1	59	75.781	Chrysemys_picta_bellii
ENSPKIG00000002905	-	86	80.412	ENSCANG00000036233	-	64	80.412	Colobus_angolensis_palliatus
ENSPKIG00000002905	-	94	77.344	ENSCANG00000021524	PABPC1	60	77.344	Colobus_angolensis_palliatus
ENSPKIG00000002905	-	94	74.219	ENSCANG00000041712	PABPC3	59	74.219	Colobus_angolensis_palliatus
ENSPKIG00000002905	-	94	77.344	ENSCGRG00001022067	-	58	77.344	Cricetulus_griseus_chok1gshd
ENSPKIG00000002905	-	94	67.883	ENSCGRG00001007983	Pabpc6	58	67.883	Cricetulus_griseus_chok1gshd
ENSPKIG00000002905	-	94	67.883	ENSCGRG00000019560	Pabpc6	58	67.883	Cricetulus_griseus_crigri
ENSPKIG00000002905	-	94	77.344	ENSCGRG00000006487	-	51	77.344	Cricetulus_griseus_crigri
ENSPKIG00000002905	-	94	75.000	ENSDNOG00000006598	-	68	75.000	Dasypus_novemcinctus
ENSPKIG00000002905	-	94	77.344	ENSDNOG00000008718	PABPC1	58	77.344	Dasypus_novemcinctus
ENSPKIG00000002905	-	94	78.125	ENSDORG00000013935	Pabpc1	59	78.125	Dipodomys_ordii
ENSPKIG00000002905	-	94	77.344	ENSEASG00005002810	PABPC1	58	77.344	Equus_asinus_asinus
ENSPKIG00000002905	-	90	55.906	ENSEASG00005014126	-	75	43.307	Equus_asinus_asinus
ENSPKIG00000002905	-	94	77.344	ENSECAG00000020699	PABPC1	58	77.344	Equus_caballus
ENSPKIG00000002905	-	94	75.806	ENSEEUG00000002701	PABPC1	51	75.806	Erinaceus_europaeus
ENSPKIG00000002905	-	85	45.833	ENSELUG00000005247	-	75	45.833	Esox_lucius
ENSPKIG00000002905	-	94	77.344	ENSFCAG00000001874	PABPC1	59	77.344	Felis_catus
ENSPKIG00000002905	-	94	78.125	ENSFALG00000005841	PABPC1	51	78.125	Ficedula_albicollis
ENSPKIG00000002905	-	94	77.344	ENSFDAG00000005583	PABPC1	51	77.344	Fukomys_damarensis
ENSPKIG00000002905	-	91	73.438	ENSFDAG00000018480	PABPC3	57	73.438	Fukomys_damarensis
ENSPKIG00000002905	-	94	78.125	ENSGALG00000030280	PABPC1	59	78.125	Gallus_gallus
ENSPKIG00000002905	-	94	78.125	ENSGAGG00000000869	PABPC1	59	78.125	Gopherus_agassizii
ENSPKIG00000002905	-	94	77.344	ENSGGOG00000006785	-	58	77.344	Gorilla_gorilla
ENSPKIG00000002905	-	94	36.923	ENSGGOG00000041637	-	67	33.784	Gorilla_gorilla
ENSPKIG00000002905	-	94	77.344	ENSHGLG00000007713	-	58	77.344	Heterocephalus_glaber_female
ENSPKIG00000002905	-	94	77.344	ENSHGLG00100007448	-	51	77.344	Heterocephalus_glaber_male
ENSPKIG00000002905	-	94	69.531	ENSHGLG00100000417	-	50	69.531	Heterocephalus_glaber_male
ENSPKIG00000002905	-	88	60.938	ENSIPUG00000020086	-	85	60.938	Ictalurus_punctatus
ENSPKIG00000002905	-	99	39.394	ENSIPUG00000024284	-	59	39.394	Ictalurus_punctatus
ENSPKIG00000002905	-	94	77.344	ENSSTOG00000016395	PABPC3	62	77.344	Ictidomys_tridecemlineatus
ENSPKIG00000002905	-	94	69.531	ENSJJAG00000014258	Pabpc2	59	69.531	Jaculus_jaculus
ENSPKIG00000002905	-	97	58.594	ENSJJAG00000019230	Pabpc6	66	58.594	Jaculus_jaculus
ENSPKIG00000002905	-	94	77.344	ENSJJAG00000015918	Pabpc1	58	77.344	Jaculus_jaculus
ENSPKIG00000002905	-	94	77.344	ENSLACG00000004395	PABPC1	59	77.344	Latimeria_chalumnae
ENSPKIG00000002905	-	94	78.906	ENSLOCG00000009681	PABPC1	58	78.906	Lepisosteus_oculatus
ENSPKIG00000002905	-	94	77.344	ENSLAFG00000013994	PABPC1	60	77.344	Loxodonta_africana
ENSPKIG00000002905	-	94	76.562	ENSMFAG00000004725	-	51	76.562	Macaca_fascicularis
ENSPKIG00000002905	-	94	75.781	ENSMFAG00000016858	PABPC3	59	75.781	Macaca_fascicularis
ENSPKIG00000002905	-	94	77.344	ENSMFAG00000044845	PABPC1	58	77.344	Macaca_fascicularis
ENSPKIG00000002905	-	86	58.559	ENSMFAG00000034213	-	53	58.559	Macaca_fascicularis
ENSPKIG00000002905	-	94	77.344	ENSMMUG00000017786	PABPC1	69	77.344	Macaca_mulatta
ENSPKIG00000002905	-	94	75.000	ENSMMUG00000020835	PABPC3	78	75.000	Macaca_mulatta
ENSPKIG00000002905	-	94	75.781	ENSMMUG00000047411	-	58	75.781	Macaca_mulatta
ENSPKIG00000002905	-	94	77.344	ENSMNEG00000010564	-	51	77.344	Macaca_nemestrina
ENSPKIG00000002905	-	94	75.781	ENSMNEG00000042936	PABPC3	59	75.781	Macaca_nemestrina
ENSPKIG00000002905	-	94	77.344	ENSMNEG00000009340	-	74	77.344	Macaca_nemestrina
ENSPKIG00000002905	-	86	55.738	ENSMLEG00000041649	-	54	55.738	Mandrillus_leucophaeus
ENSPKIG00000002905	-	94	76.562	ENSMLEG00000042214	PABPC3	59	76.562	Mandrillus_leucophaeus
ENSPKIG00000002905	-	94	77.344	ENSMLEG00000027792	-	59	77.344	Mandrillus_leucophaeus
ENSPKIG00000002905	-	94	78.125	ENSMGAG00000012239	PABPC1	51	78.125	Meleagris_gallopavo
ENSPKIG00000002905	-	91	67.939	ENSMAUG00000003031	Pabpc6	58	67.939	Mesocricetus_auratus
ENSPKIG00000002905	-	88	69.531	ENSMAUG00000017991	Pabpc2	57	69.531	Mesocricetus_auratus
ENSPKIG00000002905	-	94	75.000	ENSMICG00000011830	PABPC3	60	75.000	Microcebus_murinus
ENSPKIG00000002905	-	94	77.344	ENSMICG00000009121	PABPC1	69	77.344	Microcebus_murinus
ENSPKIG00000002905	-	94	76.562	ENSMOCG00000004921	-	59	76.562	Microtus_ochrogaster
ENSPKIG00000002905	-	88	67.969	ENSMOCG00000001354	Pabpc2	57	67.969	Microtus_ochrogaster
ENSPKIG00000002905	-	94	73.723	ENSMOCG00000018191	-	50	73.723	Microtus_ochrogaster
ENSPKIG00000002905	-	94	78.125	ENSMODG00000006222	PABPC1	59	78.125	Monodelphis_domestica
ENSPKIG00000002905	-	94	73.438	ENSMODG00000017105	-	59	73.438	Monodelphis_domestica
ENSPKIG00000002905	-	94	73.438	ENSMODG00000012040	-	51	73.438	Monodelphis_domestica
ENSPKIG00000002905	-	88	71.875	MGP_CAROLIEiJ_G0022217	Pabpc2	57	71.875	Mus_caroli
ENSPKIG00000002905	-	88	71.094	MGP_CAROLIEiJ_G0021058	Pabpc6	57	71.094	Mus_caroli
ENSPKIG00000002905	-	94	78.125	ENSMUSG00000022283	Pabpc1	59	78.125	Mus_musculus
ENSPKIG00000002905	-	94	65.693	ENSMUSG00000046173	Pabpc6	57	65.693	Mus_musculus
ENSPKIG00000002905	-	88	70.312	ENSMUSG00000051732	Pabpc2	57	70.312	Mus_musculus
ENSPKIG00000002905	-	88	71.094	MGP_PahariEiJ_G0018950	Pabpc2	57	71.094	Mus_pahari
ENSPKIG00000002905	-	94	76.562	MGP_PahariEiJ_G0019749	Pabpc1	58	76.562	Mus_pahari
ENSPKIG00000002905	-	88	69.531	MGP_SPRETEiJ_G0023126	Pabpc2	57	69.531	Mus_spretus
ENSPKIG00000002905	-	94	66.423	MGP_SPRETEiJ_G0021962	Pabpc6	57	66.423	Mus_spretus
ENSPKIG00000002905	-	94	78.125	MGP_SPRETEiJ_G0020636	Pabpc1	59	78.125	Mus_spretus
ENSPKIG00000002905	-	94	75.781	ENSMPUG00000015163	PABPC1	51	75.781	Mustela_putorius_furo
ENSPKIG00000002905	-	94	57.031	ENSMLUG00000030069	-	60	57.031	Myotis_lucifugus
ENSPKIG00000002905	-	94	62.698	ENSNGAG00000023773	-	53	62.698	Nannospalax_galili
ENSPKIG00000002905	-	94	77.344	ENSNGAG00000000996	Pabpc1	58	77.344	Nannospalax_galili
ENSPKIG00000002905	-	88	68.504	ENSNGAG00000016040	Pabpc2	57	68.504	Nannospalax_galili
ENSPKIG00000002905	-	88	69.531	ENSNGAG00000000987	Pabpc6	57	69.531	Nannospalax_galili
ENSPKIG00000002905	-	94	50.820	ENSNLEG00000034154	-	77	50.820	Nomascus_leucogenys
ENSPKIG00000002905	-	94	72.656	ENSNLEG00000018338	PABPC3	60	72.656	Nomascus_leucogenys
ENSPKIG00000002905	-	94	77.344	ENSNLEG00000003142	-	58	77.344	Nomascus_leucogenys
ENSPKIG00000002905	-	99	67.188	ENSNLEG00000034666	-	72	67.188	Nomascus_leucogenys
ENSPKIG00000002905	-	94	77.344	ENSOPRG00000009667	PABPC3	58	77.344	Ochotona_princeps
ENSPKIG00000002905	-	88	75.781	ENSODEG00000013269	-	73	75.781	Octodon_degus
ENSPKIG00000002905	-	94	78.125	ENSOANG00000007307	PABPC1	59	78.125	Ornithorhynchus_anatinus
ENSPKIG00000002905	-	94	77.344	ENSOCUG00000004354	-	58	77.344	Oryctolagus_cuniculus
ENSPKIG00000002905	-	94	77.344	ENSOCUG00000023935	-	59	77.344	Oryctolagus_cuniculus
ENSPKIG00000002905	-	88	62.500	ENSOGAG00000033369	-	58	62.500	Otolemur_garnettii
ENSPKIG00000002905	-	94	73.438	ENSOGAG00000007921	-	65	73.438	Otolemur_garnettii
ENSPKIG00000002905	-	94	72.656	ENSOGAG00000025522	-	58	72.656	Otolemur_garnettii
ENSPKIG00000002905	-	94	77.344	ENSOARG00000000095	PABPC1	51	77.344	Ovis_aries
ENSPKIG00000002905	-	94	77.344	ENSPPAG00000037498	-	57	77.344	Pan_paniscus
ENSPKIG00000002905	-	94	77.344	ENSPPRG00000003755	PABPC1	60	77.344	Panthera_pardus
ENSPKIG00000002905	-	94	77.344	ENSPTIG00000021083	PABPC1	58	77.344	Panthera_tigris_altaica
ENSPKIG00000002905	-	94	77.344	ENSPTRG00000047939	PABPC1	62	77.344	Pan_troglodytes
ENSPKIG00000002905	-	94	75.781	ENSPANG00000032213	PABPC3	59	75.781	Papio_anubis
ENSPKIG00000002905	-	100	67.969	ENSPANG00000032575	-	69	67.969	Papio_anubis
ENSPKIG00000002905	-	86	56.557	ENSPANG00000030537	-	54	56.557	Papio_anubis
ENSPKIG00000002905	-	94	77.344	ENSPANG00000010645	PABPC1	58	77.344	Papio_anubis
ENSPKIG00000002905	-	94	78.125	ENSPSIG00000003719	PABPC1	59	78.125	Pelodiscus_sinensis
ENSPKIG00000002905	-	94	69.531	ENSPEMG00000013149	Pabpc2	59	69.531	Peromyscus_maniculatus_bairdii
ENSPKIG00000002905	-	94	77.344	ENSPEMG00000014998	Pabpc1	58	77.344	Peromyscus_maniculatus_bairdii
ENSPKIG00000002905	-	94	78.125	ENSPCIG00000000267	-	69	78.125	Phascolarctos_cinereus
ENSPKIG00000002905	-	94	77.344	ENSPPYG00000018790	PABPC1	58	77.344	Pongo_abelii
ENSPKIG00000002905	-	88	48.438	ENSPPYG00000012833	-	68	48.438	Pongo_abelii
ENSPKIG00000002905	-	94	75.000	ENSPPYG00000005219	PABPC3	59	75.000	Pongo_abelii
ENSPKIG00000002905	-	100	75.781	ENSPCOG00000013197	PABPC3	60	75.781	Propithecus_coquereli
ENSPKIG00000002905	-	94	77.344	ENSPCOG00000020234	PABPC1	59	77.344	Propithecus_coquereli
ENSPKIG00000002905	-	94	77.344	ENSPVAG00000016640	PABPC1	59	77.344	Pteropus_vampyrus
ENSPKIG00000002905	-	90	68.702	ENSRNOG00000014527	Pabpc2	57	68.702	Rattus_norvegicus
ENSPKIG00000002905	-	94	66.423	ENSRNOG00000017367	Pabpc6	60	66.423	Rattus_norvegicus
ENSPKIG00000002905	-	94	78.125	ENSRNOG00000008639	Pabpc1	70	78.125	Rattus_norvegicus
ENSPKIG00000002905	-	88	64.912	ENSRBIG00000000042	-	54	64.912	Rhinopithecus_bieti
ENSPKIG00000002905	-	94	77.344	ENSRBIG00000029759	-	57	77.344	Rhinopithecus_bieti
ENSPKIG00000002905	-	94	76.562	ENSRBIG00000034396	PABPC3	59	76.562	Rhinopithecus_bieti
ENSPKIG00000002905	-	94	75.781	ENSRROG00000032349	-	58	75.781	Rhinopithecus_roxellana
ENSPKIG00000002905	-	94	77.344	ENSRROG00000042796	-	57	77.344	Rhinopithecus_roxellana
ENSPKIG00000002905	-	94	76.562	ENSRROG00000036871	PABPC3	59	76.562	Rhinopithecus_roxellana
ENSPKIG00000002905	-	88	47.656	ENSRROG00000029758	-	62	47.656	Rhinopithecus_roxellana
ENSPKIG00000002905	-	94	75.000	ENSSBOG00000023677	PABPC3	59	75.000	Saimiri_boliviensis_boliviensis
ENSPKIG00000002905	-	86	70.707	ENSSBOG00000025499	-	56	70.707	Saimiri_boliviensis_boliviensis
ENSPKIG00000002905	-	94	77.344	ENSSBOG00000022216	PABPC1	54	36.496	Saimiri_boliviensis_boliviensis
ENSPKIG00000002905	-	94	72.131	ENSSBOG00000021975	-	79	72.131	Saimiri_boliviensis_boliviensis
ENSPKIG00000002905	-	94	69.697	ENSSBOG00000020745	-	70	69.173	Saimiri_boliviensis_boliviensis
ENSPKIG00000002905	-	94	78.125	ENSSHAG00000011267	PABPC1	51	78.125	Sarcophilus_harrisii
ENSPKIG00000002905	-	94	73.438	ENSSHAG00000003431	-	59	73.438	Sarcophilus_harrisii
ENSPKIG00000002905	-	94	75.781	ENSSFOG00015006617	-	59	75.781	Scleropages_formosus
ENSPKIG00000002905	-	88	75.000	ENSSLDG00000009165	-	93	75.000	Seriola_lalandi_dorsalis
ENSPKIG00000002905	-	94	81.250	ENSSPUG00000018259	-	70	81.250	Sphenodon_punctatus
ENSPKIG00000002905	-	94	78.125	ENSSPUG00000018267	PABPC1	59	78.125	Sphenodon_punctatus
ENSPKIG00000002905	-	94	77.344	ENSSSCG00000006063	PABPC1	69	77.344	Sus_scrofa
ENSPKIG00000002905	-	94	78.125	ENSTGUG00000012067	PABPC1	59	78.125	Taeniopygia_guttata
ENSPKIG00000002905	-	94	76.562	ENSTTRG00000004689	PABPC3	60	76.562	Tursiops_truncatus
ENSPKIG00000002905	-	94	77.344	ENSUAMG00000024428	PABPC1	61	77.344	Ursus_americanus
ENSPKIG00000002905	-	94	77.344	ENSUMAG00000017554	PABPC1	53	77.344	Ursus_maritimus
ENSPKIG00000002905	-	94	77.344	ENSVPAG00000003865	PABPC1	54	77.344	Vicugna_pacos
ENSPKIG00000002905	-	94	77.344	ENSVVUG00000013156	PABPC1	52	77.344	Vulpes_vulpes
ENSPKIG00000002905	-	88	74.219	ENSXETG00000006635	pabpc1	57	74.219	Xenopus_tropicalis