EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000002914 (Gene tree)
Gene ID: 111846609
Gene Symbol: CNOT1 (1 of many)
Alias: -
Full Name: CCR4-NOT transcription complex subunit 1-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 24561 bases
Position: chrPGUA01000011.1:3009081-3033641
Accession: 111846609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000017045	Not1	PF04054.15	1.4e-152	1	1
ENSPKIP00000016804	Not1	PF04054.15	2.8e-151	1	1
ENSPKIP00000016718	Not1	PF04054.15	2.8e-151	1	1
ENSPKIP00000016896	Not1	PF04054.15	2.9e-151	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000041214	CNOT1 (1 of many)-201	8563	XM_023816976	ENSPKIP00000016718	2398 (aa)	XP_023672744	-
ENSPKIT00000041399	CNOT1 (1 of many)-203	7966	-	ENSPKIP00000016896	2438 (aa)	-	-
ENSPKIT00000041304	CNOT1 (1 of many)-202	8678	XM_023816984	ENSPKIP00000016804	2391 (aa)	XP_023672752	UPI000CD65767
ENSPKIT00000041550	CNOT1 (1 of many)-204	6909	-	ENSPKIP00000017045	2302 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000002914's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000002914's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000002914	CNOT1	100	94.670	ENSPKIG00000023538	CNOT1	97	94.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000002914	CNOT1	99	93.258	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSPKIG00000002914	CNOT1	99	88.769	ENSAPOG00000005042	cnot1	99	88.898	Acanthochromis_polyacanthus
ENSPKIG00000002914	CNOT1	99	93.258	ENSAMEG00000017298	CNOT1	97	93.258	Ailuropoda_melanoleuca
ENSPKIG00000002914	CNOT1	90	93.128	ENSACIG00000016003	cnot1	97	93.258	Amphilophus_citrinellus
ENSPKIG00000002914	CNOT1	99	86.839	ENSAPEG00000022342	cnot1	100	86.922	Amphiprion_percula
ENSPKIG00000002914	CNOT1	99	89.158	ENSATEG00000012892	cnot1	99	89.114	Anabas_testudineus
ENSPKIG00000002914	CNOT1	99	92.146	ENSAPLG00000007162	CNOT1	97	93.128	Anas_platyrhynchos
ENSPKIG00000002914	CNOT1	90	84.900	ENSACAG00000001602	CNOT1	98	85.021	Anolis_carolinensis
ENSPKIG00000002914	CNOT1	99	84.260	ENSANAG00000038198	CNOT1	99	83.099	Aotus_nancymaae
ENSPKIG00000002914	CNOT1	99	88.543	ENSACLG00000014234	cnot1	99	88.385	Astatotilapia_calliptera
ENSPKIG00000002914	CNOT1	99	87.542	ENSAMXG00000013170	cnot1	99	88.063	Astyanax_mexicanus
ENSPKIG00000002914	CNOT1	99	93.258	ENSBTAG00000020782	CNOT1	97	93.800	Bos_taurus
ENSPKIG00000002914	CNOT1	78	40.981	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSPKIG00000002914	CNOT1	99	93.258	ENSCJAG00000011318	CNOT1	97	93.258	Callithrix_jacchus
ENSPKIG00000002914	CNOT1	99	92.329	ENSCAFG00000008426	CNOT1	97	92.329	Canis_familiaris
ENSPKIG00000002914	CNOT1	99	90.896	ENSCAFG00020010156	CNOT1	97	90.896	Canis_lupus_dingo
ENSPKIG00000002914	CNOT1	99	93.258	ENSCHIG00000010452	CNOT1	97	93.258	Capra_hircus
ENSPKIG00000002914	CNOT1	99	93.258	ENSTSYG00000006888	CNOT1	97	93.258	Carlito_syrichta
ENSPKIG00000002914	CNOT1	99	93.399	ENSCPOG00000013026	CNOT1	97	93.399	Cavia_porcellus
ENSPKIG00000002914	CNOT1	99	93.258	ENSCCAG00000026333	CNOT1	97	93.258	Cebus_capucinus
ENSPKIG00000002914	CNOT1	99	93.258	ENSCATG00000032625	CNOT1	97	93.258	Cercocebus_atys
ENSPKIG00000002914	CNOT1	99	93.399	ENSCLAG00000006289	CNOT1	97	93.399	Chinchilla_lanigera
ENSPKIG00000002914	CNOT1	99	93.258	ENSCSAG00000004731	CNOT1	97	93.258	Chlorocebus_sabaeus
ENSPKIG00000002914	CNOT1	80	95.455	ENSCHOG00000009712	CNOT1	83	94.444	Choloepus_hoffmanni
ENSPKIG00000002914	CNOT1	98	92.978	ENSCPBG00000026222	CNOT1	96	92.978	Chrysemys_picta_bellii
ENSPKIG00000002914	CNOT1	99	57.007	ENSCING00000009149	-	99	57.008	Ciona_intestinalis
ENSPKIG00000002914	CNOT1	89	76.602	ENSCSAVG00000002414	-	97	76.602	Ciona_savignyi
ENSPKIG00000002914	CNOT1	99	92.350	ENSCANG00000040534	CNOT1	97	92.350	Colobus_angolensis_palliatus
ENSPKIG00000002914	CNOT1	99	93.118	ENSCGRG00001016365	Cnot1	97	93.118	Cricetulus_griseus_chok1gshd
ENSPKIG00000002914	CNOT1	99	93.118	ENSCGRG00000001714	Cnot1	97	93.118	Cricetulus_griseus_crigri
ENSPKIG00000002914	CNOT1	99	87.003	ENSCVAG00000018930	cnot1	100	87.020	Cyprinodon_variegatus
ENSPKIG00000002914	CNOT1	99	86.803	ENSDARG00000004174	cnot1	99	87.052	Danio_rerio
ENSPKIG00000002914	CNOT1	99	90.743	ENSDNOG00000013250	CNOT1	97	90.743	Dasypus_novemcinctus
ENSPKIG00000002914	CNOT1	94	50.955	FBgn0085436	Not1	99	46.763	Drosophila_melanogaster
ENSPKIG00000002914	CNOT1	86	91.390	ENSETEG00000012806	CNOT1	84	91.390	Echinops_telfairi
ENSPKIG00000002914	CNOT1	83	74.737	ENSEBUG00000011534	cnot1	95	74.737	Eptatretus_burgeri
ENSPKIG00000002914	CNOT1	99	93.258	ENSEASG00005005819	CNOT1	97	93.258	Equus_asinus_asinus
ENSPKIG00000002914	CNOT1	99	93.258	ENSECAG00000009889	CNOT1	97	93.258	Equus_caballus
ENSPKIG00000002914	CNOT1	88	93.051	ENSEEUG00000006015	CNOT1	85	96.000	Erinaceus_europaeus
ENSPKIG00000002914	CNOT1	99	92.360	ENSELUG00000014085	cnot1	97	92.360	Esox_lucius
ENSPKIG00000002914	CNOT1	99	92.350	ENSFCAG00000025155	CNOT1	97	93.258	Felis_catus
ENSPKIG00000002914	CNOT1	99	93.258	ENSFALG00000007285	CNOT1	97	93.258	Ficedula_albicollis
ENSPKIG00000002914	CNOT1	99	93.399	ENSFDAG00000013399	CNOT1	97	93.399	Fukomys_damarensis
ENSPKIG00000002914	CNOT1	99	86.309	ENSFHEG00000020574	cnot1	99	86.558	Fundulus_heteroclitus
ENSPKIG00000002914	CNOT1	90	94.467	ENSGMOG00000012864	cnot1	97	94.467	Gadus_morhua
ENSPKIG00000002914	CNOT1	99	93.118	ENSGALG00000002301	CNOT1	97	93.118	Gallus_gallus
ENSPKIG00000002914	CNOT1	100	94.390	ENSGAFG00000015005	cnot1	97	94.390	Gambusia_affinis
ENSPKIG00000002914	CNOT1	90	87.570	ENSGACG00000002606	cnot1	100	91.253	Gasterosteus_aculeatus
ENSPKIG00000002914	CNOT1	99	92.978	ENSGAGG00000022646	CNOT1	97	92.978	Gopherus_agassizii
ENSPKIG00000002914	CNOT1	99	93.258	ENSGGOG00000009547	CNOT1	97	93.258	Gorilla_gorilla
ENSPKIG00000002914	CNOT1	99	88.778	ENSHBUG00000001729	cnot1	99	88.836	Haplochromis_burtoni
ENSPKIG00000002914	CNOT1	99	93.399	ENSHGLG00000014322	CNOT1	97	93.399	Heterocephalus_glaber_female
ENSPKIG00000002914	CNOT1	100	86.534	ENSHCOG00000006501	cnot1	100	86.763	Hippocampus_comes
ENSPKIG00000002914	CNOT1	99	85.353	ENSIPUG00000011915	cnot1	99	85.893	Ictalurus_punctatus
ENSPKIG00000002914	CNOT1	99	93.399	ENSSTOG00000005490	CNOT1	97	93.399	Ictidomys_tridecemlineatus
ENSPKIG00000002914	CNOT1	99	92.697	ENSJJAG00000000633	Cnot1	97	92.697	Jaculus_jaculus
ENSPKIG00000002914	CNOT1	99	86.797	ENSKMAG00000006149	cnot1	100	86.861	Kryptolebias_marmoratus
ENSPKIG00000002914	CNOT1	95	94.422	ENSLBEG00000004740	cnot1	99	94.422	Labrus_bergylta
ENSPKIG00000002914	CNOT1	99	93.118	ENSLACG00000010869	CNOT1	99	93.118	Latimeria_chalumnae
ENSPKIG00000002914	CNOT1	99	94.803	ENSLOCG00000006324	cnot1	97	94.803	Lepisosteus_oculatus
ENSPKIG00000002914	CNOT1	99	93.118	ENSLAFG00000000098	CNOT1	97	93.118	Loxodonta_africana
ENSPKIG00000002914	CNOT1	99	93.258	ENSMFAG00000035888	CNOT1	97	93.258	Macaca_fascicularis
ENSPKIG00000002914	CNOT1	99	93.258	ENSMMUG00000014625	CNOT1	97	93.258	Macaca_mulatta
ENSPKIG00000002914	CNOT1	99	92.350	ENSMNEG00000031820	CNOT1	97	93.258	Macaca_nemestrina
ENSPKIG00000002914	CNOT1	99	88.764	ENSMLEG00000040933	CNOT1	97	88.764	Mandrillus_leucophaeus
ENSPKIG00000002914	CNOT1	99	85.714	ENSMAMG00000016524	cnot1	100	85.928	Mastacembelus_armatus
ENSPKIG00000002914	CNOT1	99	87.030	ENSMZEG00005016210	cnot1	99	86.874	Maylandia_zebra
ENSPKIG00000002914	CNOT1	99	93.118	ENSMGAG00000001908	CNOT1	97	93.118	Meleagris_gallopavo
ENSPKIG00000002914	CNOT1	99	93.258	ENSMICG00000007071	CNOT1	97	93.258	Microcebus_murinus
ENSPKIG00000002914	CNOT1	99	93.118	ENSMOCG00000017969	Cnot1	97	93.118	Microtus_ochrogaster
ENSPKIG00000002914	CNOT1	99	87.678	ENSMMOG00000019134	cnot1	99	87.851	Mola_mola
ENSPKIG00000002914	CNOT1	99	92.286	ENSMODG00000014199	CNOT1	97	93.268	Monodelphis_domestica
ENSPKIG00000002914	CNOT1	99	86.589	ENSMALG00000008645	cnot1	100	86.803	Monopterus_albus
ENSPKIG00000002914	CNOT1	98	86.667	MGP_CAROLIEiJ_G0031430	Cnot1	92	89.231	Mus_caroli
ENSPKIG00000002914	CNOT1	99	93.118	ENSMUSG00000036550	Cnot1	97	93.118	Mus_musculus
ENSPKIG00000002914	CNOT1	99	93.118	MGP_PahariEiJ_G0023028	Cnot1	97	93.118	Mus_pahari
ENSPKIG00000002914	CNOT1	99	93.118	MGP_SPRETEiJ_G0032549	Cnot1	97	93.118	Mus_spretus
ENSPKIG00000002914	CNOT1	99	93.258	ENSMPUG00000004830	CNOT1	97	93.258	Mustela_putorius_furo
ENSPKIG00000002914	CNOT1	99	93.118	ENSMLUG00000003728	CNOT1	97	93.118	Myotis_lucifugus
ENSPKIG00000002914	CNOT1	99	93.258	ENSNGAG00000018628	Cnot1	97	93.258	Nannospalax_galili
ENSPKIG00000002914	CNOT1	97	88.536	ENSNBRG00000019358	cnot1	99	88.536	Neolamprologus_brichardi
ENSPKIG00000002914	CNOT1	99	93.258	ENSNLEG00000003566	CNOT1	97	93.258	Nomascus_leucogenys
ENSPKIG00000002914	CNOT1	87	87.248	ENSMEUG00000006145	CNOT1	88	87.248	Notamacropus_eugenii
ENSPKIG00000002914	CNOT1	85	95.089	ENSOPRG00000005604	CNOT1	83	94.667	Ochotona_princeps
ENSPKIG00000002914	CNOT1	99	93.399	ENSODEG00000016337	CNOT1	97	93.399	Octodon_degus
ENSPKIG00000002914	CNOT1	99	87.505	ENSONIG00000007358	cnot1	99	87.687	Oreochromis_niloticus
ENSPKIG00000002914	CNOT1	89	92.837	ENSOANG00000012109	CNOT1	97	92.837	Ornithorhynchus_anatinus
ENSPKIG00000002914	CNOT1	99	93.258	ENSOCUG00000006911	CNOT1	97	93.258	Oryctolagus_cuniculus
ENSPKIG00000002914	CNOT1	99	86.886	ENSORLG00000013734	cnot1	97	94.663	Oryzias_latipes
ENSPKIG00000002914	CNOT1	99	88.483	ENSORLG00020017012	cnot1	97	88.483	Oryzias_latipes_hni
ENSPKIG00000002914	CNOT1	99	88.483	ENSORLG00015007091	cnot1	97	88.483	Oryzias_latipes_hsok
ENSPKIG00000002914	CNOT1	99	84.686	ENSOMEG00000015124	cnot1	99	84.763	Oryzias_melastigma
ENSPKIG00000002914	CNOT1	99	93.258	ENSOGAG00000000543	CNOT1	97	93.258	Otolemur_garnettii
ENSPKIG00000002914	CNOT1	99	93.258	ENSOARG00000001567	CNOT1	97	93.258	Ovis_aries
ENSPKIG00000002914	CNOT1	99	93.258	ENSPPAG00000022013	CNOT1	97	93.258	Pan_paniscus
ENSPKIG00000002914	CNOT1	99	93.258	ENSPPRG00000004867	CNOT1	97	93.258	Panthera_pardus
ENSPKIG00000002914	CNOT1	99	93.258	ENSPTIG00000012589	CNOT1	97	93.258	Panthera_tigris_altaica
ENSPKIG00000002914	CNOT1	99	92.350	ENSPTRG00000008183	CNOT1	97	92.350	Pan_troglodytes
ENSPKIG00000002914	CNOT1	99	82.987	ENSPANG00000020901	CNOT1	99	83.098	Papio_anubis
ENSPKIG00000002914	CNOT1	99	93.118	ENSPSIG00000005499	CNOT1	97	93.118	Pelodiscus_sinensis
ENSPKIG00000002914	CNOT1	99	85.795	ENSPMAG00000009381	cnot1	98	85.674	Petromyzon_marinus
ENSPKIG00000002914	CNOT1	99	93.399	ENSPCIG00000007343	CNOT1	97	94.000	Phascolarctos_cinereus
ENSPKIG00000002914	CNOT1	99	86.031	ENSPFOG00000003497	cnot1	100	86.446	Poecilia_formosa
ENSPKIG00000002914	CNOT1	95	93.837	ENSPLAG00000014018	cnot1	100	93.837	Poecilia_latipinna
ENSPKIG00000002914	CNOT1	95	93.837	ENSPMEG00000005868	cnot1	100	93.837	Poecilia_mexicana
ENSPKIG00000002914	CNOT1	95	94.036	ENSPREG00000018793	cnot1	100	94.036	Poecilia_reticulata
ENSPKIG00000002914	CNOT1	99	93.258	ENSPPYG00000007410	CNOT1	97	93.258	Pongo_abelii
ENSPKIG00000002914	CNOT1	88	87.324	ENSPCAG00000003241	CNOT1	86	87.324	Procavia_capensis
ENSPKIG00000002914	CNOT1	99	92.350	ENSPCOG00000027139	CNOT1	97	92.350	Propithecus_coquereli
ENSPKIG00000002914	CNOT1	97	95.402	ENSPVAG00000004243	CNOT1	98	95.808	Pteropus_vampyrus
ENSPKIG00000002914	CNOT1	99	88.778	ENSPNYG00000012919	cnot1	99	88.836	Pundamilia_nyererei
ENSPKIG00000002914	CNOT1	99	86.018	ENSPNAG00000000246	cnot1	100	86.608	Pygocentrus_nattereri
ENSPKIG00000002914	CNOT1	99	92.978	ENSRNOG00000012271	Cnot1	97	92.978	Rattus_norvegicus
ENSPKIG00000002914	CNOT1	99	92.350	ENSRBIG00000044598	CNOT1	97	92.350	Rhinopithecus_bieti
ENSPKIG00000002914	CNOT1	99	93.258	ENSRROG00000000906	CNOT1	97	93.258	Rhinopithecus_roxellana
ENSPKIG00000002914	CNOT1	56	34.074	YCR093W	CDC39	62	34.074	Saccharomyces_cerevisiae
ENSPKIG00000002914	CNOT1	99	88.552	ENSSBOG00000029155	CNOT1	97	88.552	Saimiri_boliviensis_boliviensis
ENSPKIG00000002914	CNOT1	99	93.399	ENSSHAG00000012187	CNOT1	97	93.399	Sarcophilus_harrisii
ENSPKIG00000002914	CNOT1	99	88.889	ENSSFOG00015017614	cnot1	97	88.889	Scleropages_formosus
ENSPKIG00000002914	CNOT1	99	88.144	ENSSMAG00000013844	cnot1	99	88.352	Scophthalmus_maximus
ENSPKIG00000002914	CNOT1	99	89.119	ENSSDUG00000021491	cnot1	99	89.119	Seriola_dumerili
ENSPKIG00000002914	CNOT1	99	89.297	ENSSLDG00000014816	cnot1	99	89.283	Seriola_lalandi_dorsalis
ENSPKIG00000002914	CNOT1	86	94.400	ENSSARG00000000762	CNOT1	88	94.400	Sorex_araneus
ENSPKIG00000002914	CNOT1	99	87.042	ENSSPAG00000018802	cnot1	99	87.000	Stegastes_partitus
ENSPKIG00000002914	CNOT1	99	93.118	ENSSSCG00000002799	CNOT1	97	93.800	Sus_scrofa
ENSPKIG00000002914	CNOT1	99	93.258	ENSTGUG00000005919	CNOT1	97	93.258	Taeniopygia_guttata
ENSPKIG00000002914	CNOT1	99	94.382	ENSTNIG00000018706	cnot1	97	94.382	Tetraodon_nigroviridis
ENSPKIG00000002914	CNOT1	81	96.479	ENSTBEG00000000720	CNOT1	80	96.479	Tupaia_belangeri
ENSPKIG00000002914	CNOT1	95	93.258	ENSTTRG00000008460	CNOT1	92	93.258	Tursiops_truncatus
ENSPKIG00000002914	CNOT1	99	93.258	ENSUAMG00000009251	CNOT1	97	93.258	Ursus_americanus
ENSPKIG00000002914	CNOT1	99	93.258	ENSUMAG00000021291	CNOT1	97	93.258	Ursus_maritimus
ENSPKIG00000002914	CNOT1	97	90.309	ENSVPAG00000008846	CNOT1	94	90.309	Vicugna_pacos
ENSPKIG00000002914	CNOT1	99	90.896	ENSVVUG00000024037	CNOT1	97	90.896	Vulpes_vulpes
ENSPKIG00000002914	CNOT1	100	80.731	ENSXETG00000015900	cnot1	100	81.367	Xenopus_tropicalis
ENSPKIG00000002914	CNOT1	100	85.661	ENSXCOG00000013552	cnot1	100	85.911	Xiphophorus_couchianus
ENSPKIG00000002914	CNOT1	100	85.702	ENSXMAG00000006031	cnot1	100	85.952	Xiphophorus_maculatus