EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000003146 (Gene tree)
Gene ID: 111850682
Gene Symbol: rnaseh1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 9325 bases
Position: chrPGUA01000210.1:683747-693071
Accession: 111850682
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000017089	RNase_H	PF00075.24	3.8e-39	1	1
ENSPKIP00000017106	RNase_H	PF00075.24	3.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000041613	-	2678	-	ENSPKIP00000017106	268 (aa)	XP_023680593	UPI000CD5F1F6
ENSPKIT00000041595	-	774	-	ENSPKIP00000017089	257 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000003146's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000003146's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000003146	rnaseh1	97	50.575	ENSG00000171865	RNASEH1	90	50.192	Homo_sapiens
ENSPKIG00000003146	rnaseh1	99	60.507	ENSAPOG00000000412	rnaseh1	90	60.145	Acanthochromis_polyacanthus
ENSPKIG00000003146	rnaseh1	97	50.570	ENSAMEG00000018433	RNASEH1	89	50.570	Ailuropoda_melanoleuca
ENSPKIG00000003146	rnaseh1	99	61.594	ENSACIG00000014666	rnaseh1	89	60.870	Amphilophus_citrinellus
ENSPKIG00000003146	rnaseh1	99	60.507	ENSAOCG00000015210	rnaseh1	90	60.507	Amphiprion_ocellaris
ENSPKIG00000003146	rnaseh1	99	61.232	ENSAPEG00000014104	rnaseh1	90	61.232	Amphiprion_percula
ENSPKIG00000003146	rnaseh1	99	63.406	ENSATEG00000000598	rnaseh1	96	63.406	Anabas_testudineus
ENSPKIG00000003146	rnaseh1	93	51.163	ENSAPLG00000001961	RNASEH1	100	51.163	Anas_platyrhynchos
ENSPKIG00000003146	rnaseh1	97	45.918	ENSACAG00000016857	rnaseh1	91	45.918	Anolis_carolinensis
ENSPKIG00000003146	rnaseh1	97	51.341	ENSANAG00000024055	RNASEH1	90	51.154	Aotus_nancymaae
ENSPKIG00000003146	rnaseh1	99	60.854	ENSACLG00000006741	rnaseh1	89	60.142	Astatotilapia_calliptera
ENSPKIG00000003146	rnaseh1	99	57.818	ENSAMXG00000042940	rnaseh1	98	57.455	Astyanax_mexicanus
ENSPKIG00000003146	rnaseh1	97	52.672	ENSBTAG00000016235	RNASEH1	91	52.672	Bos_taurus
ENSPKIG00000003146	rnaseh1	99	38.577	WBGene00004382	rnh-1.0	97	36.842	Caenorhabditis_elegans
ENSPKIG00000003146	rnaseh1	97	49.434	ENSCJAG00000035450	RNASEH1	90	49.057	Callithrix_jacchus
ENSPKIG00000003146	rnaseh1	97	49.434	ENSCAFG00000003259	RNASEH1	89	50.382	Canis_familiaris
ENSPKIG00000003146	rnaseh1	59	61.589	ENSCAFG00020004994	RNASEH1	97	61.589	Canis_lupus_dingo
ENSPKIG00000003146	rnaseh1	89	40.486	ENSCHIG00000022230	-	99	40.486	Capra_hircus
ENSPKIG00000003146	rnaseh1	97	52.290	ENSCHIG00000022264	-	89	49.466	Capra_hircus
ENSPKIG00000003146	rnaseh1	98	51.128	ENSTSYG00000012926	RNASEH1	89	51.685	Carlito_syrichta
ENSPKIG00000003146	rnaseh1	91	51.029	ENSCAPG00000004813	RNASEH1	97	51.867	Cavia_aperea
ENSPKIG00000003146	rnaseh1	97	51.538	ENSCPOG00000022278	Rnaseh1	86	52.326	Cavia_porcellus
ENSPKIG00000003146	rnaseh1	97	50.566	ENSCCAG00000038017	RNASEH1	90	50.943	Cebus_capucinus
ENSPKIG00000003146	rnaseh1	97	49.430	ENSCATG00000016818	-	89	47.710	Cercocebus_atys
ENSPKIG00000003146	rnaseh1	97	50.186	ENSCATG00000016515	-	90	49.231	Cercocebus_atys
ENSPKIG00000003146	rnaseh1	97	52.045	ENSCLAG00000002440	RNASEH1	89	51.685	Chinchilla_lanigera
ENSPKIG00000003146	rnaseh1	97	49.430	ENSCSAG00000006943	RNASEH1	90	48.846	Chlorocebus_sabaeus
ENSPKIG00000003146	rnaseh1	73	53.571	ENSCHOG00000008547	RNASEH1	97	53.571	Choloepus_hoffmanni
ENSPKIG00000003146	rnaseh1	97	55.431	ENSCPBG00000021620	RNASEH1	99	53.455	Chrysemys_picta_bellii
ENSPKIG00000003146	rnaseh1	97	38.434	ENSCING00000014054	-	92	37.722	Ciona_intestinalis
ENSPKIG00000003146	rnaseh1	82	36.564	ENSCSAVG00000000009	-	96	36.564	Ciona_savignyi
ENSPKIG00000003146	rnaseh1	97	50.190	ENSCANG00000037763	RNASEH1	90	49.615	Colobus_angolensis_palliatus
ENSPKIG00000003146	rnaseh1	97	50.385	ENSCGRG00001008950	Rnaseh1	89	50.183	Cricetulus_griseus_chok1gshd
ENSPKIG00000003146	rnaseh1	97	50.385	ENSCGRG00000006029	Rnaseh1	89	50.183	Cricetulus_griseus_crigri
ENSPKIG00000003146	rnaseh1	99	59.023	ENSCSEG00000005741	rnaseh1	95	57.042	Cynoglossus_semilaevis
ENSPKIG00000003146	rnaseh1	99	61.957	ENSCVAG00000018717	rnaseh1	89	60.949	Cyprinodon_variegatus
ENSPKIG00000003146	rnaseh1	99	62.676	ENSDARG00000042571	rnaseh1	99	61.972	Danio_rerio
ENSPKIG00000003146	rnaseh1	97	49.814	ENSDNOG00000016056	RNASEH1	89	49.442	Dasypus_novemcinctus
ENSPKIG00000003146	rnaseh1	97	50.000	ENSDORG00000000704	Rnaseh1	89	50.000	Dipodomys_ordii
ENSPKIG00000003146	rnaseh1	97	38.621	FBgn0023171	rnh1	93	37.217	Drosophila_melanogaster
ENSPKIG00000003146	rnaseh1	97	47.727	ENSETEG00000012674	RNASEH1	89	47.727	Echinops_telfairi
ENSPKIG00000003146	rnaseh1	96	46.512	ENSEBUG00000006116	rnaseh1	77	45.185	Eptatretus_burgeri
ENSPKIG00000003146	rnaseh1	98	44.521	ENSEBUG00000008898	rnaseh1	99	44.521	Eptatretus_burgeri
ENSPKIG00000003146	rnaseh1	97	51.515	ENSEASG00005022200	RNASEH1	88	51.311	Equus_asinus_asinus
ENSPKIG00000003146	rnaseh1	97	51.515	ENSECAG00000020695	RNASEH1	88	51.311	Equus_caballus
ENSPKIG00000003146	rnaseh1	99	60.507	ENSELUG00000010112	rnaseh1	92	58.803	Esox_lucius
ENSPKIG00000003146	rnaseh1	97	50.570	ENSFCAG00000025832	RNASEH1	89	50.570	Felis_catus
ENSPKIG00000003146	rnaseh1	96	53.676	ENSFALG00000002069	RNASEH1	92	53.285	Ficedula_albicollis
ENSPKIG00000003146	rnaseh1	97	52.273	ENSFDAG00000002035	RNASEH1	79	52.672	Fukomys_damarensis
ENSPKIG00000003146	rnaseh1	100	60.573	ENSGMOG00000013818	rnaseh1	91	60.215	Gadus_morhua
ENSPKIG00000003146	rnaseh1	97	53.532	ENSGALG00000016389	RNASEH1	92	53.532	Gallus_gallus
ENSPKIG00000003146	rnaseh1	99	59.420	ENSGAFG00000001776	rnaseh1	92	58.696	Gambusia_affinis
ENSPKIG00000003146	rnaseh1	100	61.871	ENSGACG00000011935	rnaseh1	91	61.852	Gasterosteus_aculeatus
ENSPKIG00000003146	rnaseh1	97	56.716	ENSGAGG00000009150	RNASEH1	61	56.343	Gopherus_agassizii
ENSPKIG00000003146	rnaseh1	97	50.951	ENSGGOG00000034822	RNASEH1	90	50.000	Gorilla_gorilla
ENSPKIG00000003146	rnaseh1	99	59.091	ENSHBUG00000004666	rnaseh1	89	59.431	Haplochromis_burtoni
ENSPKIG00000003146	rnaseh1	97	51.538	ENSHGLG00000002585	Rnaseh1	82	51.938	Heterocephalus_glaber_female
ENSPKIG00000003146	rnaseh1	97	51.538	ENSHGLG00100005105	Rnaseh1	82	51.938	Heterocephalus_glaber_male
ENSPKIG00000003146	rnaseh1	99	59.364	ENSHCOG00000012329	rnaseh1	90	59.717	Hippocampus_comes
ENSPKIG00000003146	rnaseh1	99	59.851	ENSIPUG00000023060	rnaseh1	99	58.824	Ictalurus_punctatus
ENSPKIG00000003146	rnaseh1	97	49.430	ENSSTOG00000012774	RNASEH1	91	49.430	Ictidomys_tridecemlineatus
ENSPKIG00000003146	rnaseh1	88	48.511	ENSJJAG00000020238	Rnaseh1	89	47.083	Jaculus_jaculus
ENSPKIG00000003146	rnaseh1	96	39.844	ENSJJAG00000008994	-	90	38.697	Jaculus_jaculus
ENSPKIG00000003146	rnaseh1	97	46.154	ENSJJAG00000021481	-	89	46.154	Jaculus_jaculus
ENSPKIG00000003146	rnaseh1	99	61.679	ENSKMAG00000001373	rnaseh1	90	60.584	Kryptolebias_marmoratus
ENSPKIG00000003146	rnaseh1	99	62.030	ENSLBEG00000004480	rnaseh1	97	61.372	Labrus_bergylta
ENSPKIG00000003146	rnaseh1	97	58.909	ENSLACG00000007100	RNASEH1	88	57.246	Latimeria_chalumnae
ENSPKIG00000003146	rnaseh1	99	58.182	ENSLOCG00000017212	rnaseh1	99	58.182	Lepisosteus_oculatus
ENSPKIG00000003146	rnaseh1	97	50.929	ENSLAFG00000015091	RNASEH1	89	49.442	Loxodonta_africana
ENSPKIG00000003146	rnaseh1	97	49.808	ENSMFAG00000002323	-	89	48.659	Macaca_fascicularis
ENSPKIG00000003146	rnaseh1	97	50.379	ENSMFAG00000000063	-	90	49.425	Macaca_fascicularis
ENSPKIG00000003146	rnaseh1	97	49.808	ENSMMUG00000019280	-	89	48.077	Macaca_mulatta
ENSPKIG00000003146	rnaseh1	97	48.659	ENSMNEG00000029676	-	89	47.692	Macaca_nemestrina
ENSPKIG00000003146	rnaseh1	97	50.379	ENSMNEG00000040183	-	90	49.425	Macaca_nemestrina
ENSPKIG00000003146	rnaseh1	97	50.192	ENSMLEG00000028662	-	89	48.846	Mandrillus_leucophaeus
ENSPKIG00000003146	rnaseh1	91	50.397	ENSMLEG00000039352	-	98	49.393	Mandrillus_leucophaeus
ENSPKIG00000003146	rnaseh1	99	61.733	ENSMAMG00000019725	rnaseh1	95	60.650	Mastacembelus_armatus
ENSPKIG00000003146	rnaseh1	99	60.854	ENSMZEG00005013006	rnaseh1	89	60.142	Maylandia_zebra
ENSPKIG00000003146	rnaseh1	87	53.061	ENSMGAG00000013979	RNASEH1	99	52.653	Meleagris_gallopavo
ENSPKIG00000003146	rnaseh1	97	51.119	ENSMAUG00000014957	Rnaseh1	89	50.549	Mesocricetus_auratus
ENSPKIG00000003146	rnaseh1	97	50.943	ENSMICG00000033156	RNASEH1	89	50.943	Microcebus_murinus
ENSPKIG00000003146	rnaseh1	97	50.185	ENSMOCG00000015522	Rnaseh1	90	50.185	Microtus_ochrogaster
ENSPKIG00000003146	rnaseh1	99	60.949	ENSMMOG00000015902	rnaseh1	89	60.145	Mola_mola
ENSPKIG00000003146	rnaseh1	97	54.511	ENSMODG00000014491	-	88	51.613	Monodelphis_domestica
ENSPKIG00000003146	rnaseh1	86	47.154	ENSMODG00000028814	-	91	48.696	Monodelphis_domestica
ENSPKIG00000003146	rnaseh1	99	62.319	ENSMALG00000010565	rnaseh1	90	62.681	Monopterus_albus
ENSPKIG00000003146	rnaseh1	97	51.321	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	51.321	Mus_caroli
ENSPKIG00000003146	rnaseh1	97	51.321	ENSMUSG00000020630	Rnaseh1	89	51.321	Mus_musculus
ENSPKIG00000003146	rnaseh1	97	51.119	MGP_PahariEiJ_G0029418	Rnaseh1	89	51.321	Mus_pahari
ENSPKIG00000003146	rnaseh1	97	51.321	MGP_SPRETEiJ_G0018502	Rnaseh1	89	51.321	Mus_spretus
ENSPKIG00000003146	rnaseh1	67	56.818	ENSMPUG00000012984	RNASEH1	85	56.818	Mustela_putorius_furo
ENSPKIG00000003146	rnaseh1	97	51.145	ENSNGAG00000015966	Rnaseh1	84	50.752	Nannospalax_galili
ENSPKIG00000003146	rnaseh1	99	60.854	ENSNBRG00000008739	rnaseh1	89	60.142	Neolamprologus_brichardi
ENSPKIG00000003146	rnaseh1	97	45.018	ENSNLEG00000015400	RNASEH1	88	44.906	Nomascus_leucogenys
ENSPKIG00000003146	rnaseh1	91	45.306	ENSNLEG00000000059	-	90	45.267	Nomascus_leucogenys
ENSPKIG00000003146	rnaseh1	97	37.121	ENSMEUG00000003610	-	89	37.121	Notamacropus_eugenii
ENSPKIG00000003146	rnaseh1	97	51.341	ENSOPRG00000005072	RNASEH1	89	51.341	Ochotona_princeps
ENSPKIG00000003146	rnaseh1	97	52.788	ENSODEG00000000235	Rnaseh1	85	51.311	Octodon_degus
ENSPKIG00000003146	rnaseh1	99	61.566	ENSONIG00000018697	rnaseh1	99	60.498	Oreochromis_niloticus
ENSPKIG00000003146	rnaseh1	97	50.000	ENSOCUG00000006117	RNASEH1	90	49.621	Oryctolagus_cuniculus
ENSPKIG00000003146	rnaseh1	99	60.150	ENSORLG00000018127	rnaseh1	96	60.650	Oryzias_latipes
ENSPKIG00000003146	rnaseh1	99	60.150	ENSORLG00020013660	rnaseh1	89	60.650	Oryzias_latipes_hni
ENSPKIG00000003146	rnaseh1	99	61.733	ENSORLG00015011338	rnaseh1	89	61.372	Oryzias_latipes_hsok
ENSPKIG00000003146	rnaseh1	90	58.566	ENSOMEG00000004710	rnaseh1	92	58.566	Oryzias_melastigma
ENSPKIG00000003146	rnaseh1	97	50.741	ENSOGAG00000017176	RNASEH1	90	49.630	Otolemur_garnettii
ENSPKIG00000003146	rnaseh1	97	46.570	ENSOARG00000005386	RNASEH1	89	44.138	Ovis_aries
ENSPKIG00000003146	rnaseh1	97	50.575	ENSPPAG00000034221	RNASEH1	90	50.192	Pan_paniscus
ENSPKIG00000003146	rnaseh1	97	50.190	ENSPPRG00000015513	RNASEH1	89	50.190	Panthera_pardus
ENSPKIG00000003146	rnaseh1	91	50.407	ENSPTIG00000019034	RNASEH1	83	50.407	Panthera_tigris_altaica
ENSPKIG00000003146	rnaseh1	97	50.575	ENSPTRG00000011614	RNASEH1	90	50.192	Pan_troglodytes
ENSPKIG00000003146	rnaseh1	89	43.265	ENSPTRG00000043403	-	91	42.857	Pan_troglodytes
ENSPKIG00000003146	rnaseh1	97	47.148	ENSPANG00000018246	-	89	46.538	Papio_anubis
ENSPKIG00000003146	rnaseh1	97	50.558	ENSPANG00000000443	RNASEH1	98	48.980	Papio_anubis
ENSPKIG00000003146	rnaseh1	97	53.358	ENSPSIG00000002937	RNASEH1	99	52.985	Pelodiscus_sinensis
ENSPKIG00000003146	rnaseh1	99	58.271	ENSPMGG00000017463	rnaseh1	91	59.091	Periophthalmus_magnuspinnatus
ENSPKIG00000003146	rnaseh1	97	50.566	ENSPEMG00000022465	-	90	50.943	Peromyscus_maniculatus_bairdii
ENSPKIG00000003146	rnaseh1	97	51.698	ENSPCIG00000023334	-	88	48.214	Phascolarctos_cinereus
ENSPKIG00000003146	rnaseh1	59	40.260	ENSPCIG00000026047	-	87	40.260	Phascolarctos_cinereus
ENSPKIG00000003146	rnaseh1	99	61.232	ENSPFOG00000002841	rnaseh1	92	59.420	Poecilia_formosa
ENSPKIG00000003146	rnaseh1	72	52.308	ENSPLAG00000021349	-	76	50.769	Poecilia_latipinna
ENSPKIG00000003146	rnaseh1	99	60.870	ENSPMEG00000016826	rnaseh1	92	59.058	Poecilia_mexicana
ENSPKIG00000003146	rnaseh1	99	59.712	ENSPREG00000012197	rnaseh1	92	58.333	Poecilia_reticulata
ENSPKIG00000003146	rnaseh1	97	41.065	ENSPPYG00000025873	RNASEH1	88	40.385	Pongo_abelii
ENSPKIG00000003146	rnaseh1	89	46.473	ENSPPYG00000008067	-	90	45.798	Pongo_abelii
ENSPKIG00000003146	rnaseh1	97	50.379	ENSPCAG00000002500	RNASEH1	89	49.434	Procavia_capensis
ENSPKIG00000003146	rnaseh1	97	47.328	ENSPCOG00000019444	RNASEH1	88	47.328	Propithecus_coquereli
ENSPKIG00000003146	rnaseh1	99	49.057	ENSPVAG00000002070	RNASEH1	91	49.057	Pteropus_vampyrus
ENSPKIG00000003146	rnaseh1	99	60.854	ENSPNYG00000001292	rnaseh1	89	60.142	Pundamilia_nyererei
ENSPKIG00000003146	rnaseh1	99	63.538	ENSPNAG00000022344	rnaseh1	92	63.309	Pygocentrus_nattereri
ENSPKIG00000003146	rnaseh1	97	50.570	ENSRNOG00000008584	Rnaseh1	89	50.373	Rattus_norvegicus
ENSPKIG00000003146	rnaseh1	97	49.425	ENSRBIG00000034222	RNASEH1	89	49.615	Rhinopithecus_bieti
ENSPKIG00000003146	rnaseh1	97	49.425	ENSRROG00000041761	RNASEH1	89	49.615	Rhinopithecus_roxellana
ENSPKIG00000003146	rnaseh1	99	40.541	YMR234W	-	79	48.000	Saccharomyces_cerevisiae
ENSPKIG00000003146	rnaseh1	97	50.943	ENSSBOG00000025411	RNASEH1	90	50.943	Saimiri_boliviensis_boliviensis
ENSPKIG00000003146	rnaseh1	99	51.661	ENSSHAG00000013051	RNASEH1	89	51.661	Sarcophilus_harrisii
ENSPKIG00000003146	rnaseh1	99	63.830	ENSSFOG00015002709	rnaseh1	92	63.929	Scleropages_formosus
ENSPKIG00000003146	rnaseh1	100	62.366	ENSSMAG00000007586	rnaseh1	90	62.724	Scophthalmus_maximus
ENSPKIG00000003146	rnaseh1	100	61.151	ENSSDUG00000008217	rnaseh1	96	60.791	Seriola_dumerili
ENSPKIG00000003146	rnaseh1	98	58.182	ENSSLDG00000000442	rnaseh1	94	61.328	Seriola_lalandi_dorsalis
ENSPKIG00000003146	rnaseh1	97	53.208	ENSSPUG00000006644	RNASEH1	92	53.208	Sphenodon_punctatus
ENSPKIG00000003146	rnaseh1	100	60.573	ENSSPAG00000009353	rnaseh1	90	61.290	Stegastes_partitus
ENSPKIG00000003146	rnaseh1	97	49.635	ENSSSCG00000025305	RNASEH1	89	49.635	Sus_scrofa
ENSPKIG00000003146	rnaseh1	97	54.182	ENSTGUG00000012980	RNASEH1	92	53.091	Taeniopygia_guttata
ENSPKIG00000003146	rnaseh1	99	60.886	ENSTRUG00000015774	rnaseh1	97	58.845	Takifugu_rubripes
ENSPKIG00000003146	rnaseh1	99	60.573	ENSTNIG00000010715	rnaseh1	97	59.928	Tetraodon_nigroviridis
ENSPKIG00000003146	rnaseh1	97	47.955	ENSTTRG00000001615	RNASEH1	89	46.097	Tursiops_truncatus
ENSPKIG00000003146	rnaseh1	57	63.265	ENSUAMG00000018254	RNASEH1	76	63.265	Ursus_americanus
ENSPKIG00000003146	rnaseh1	75	50.732	ENSUMAG00000003941	RNASEH1	65	50.490	Ursus_maritimus
ENSPKIG00000003146	rnaseh1	97	46.097	ENSVPAG00000011589	RNASEH1	89	44.867	Vicugna_pacos
ENSPKIG00000003146	rnaseh1	97	50.382	ENSVVUG00000008633	RNASEH1	80	50.382	Vulpes_vulpes
ENSPKIG00000003146	rnaseh1	97	38.996	ENSXETG00000030371	-	99	38.996	Xenopus_tropicalis
ENSPKIG00000003146	rnaseh1	98	52.963	ENSXETG00000001212	rnaseh1	91	52.963	Xenopus_tropicalis
ENSPKIG00000003146	rnaseh1	99	59.420	ENSXMAG00000002357	rnaseh1	91	58.582	Xiphophorus_maculatus