EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000003203 (Gene tree)
Gene ID: 111856217
Gene Symbol: rbm25b
Alias: -
Full Name: RNA binding motif protein 25
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 14443 bases
Position: chrPGUA01000304.1:606974-621416
Accession: 111856217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000017203	RRM_1	PF00076.22	2.1e-09	1	1
ENSPKIP00000017353	RRM_1	PF00076.22	2.5e-09	1	1
ENSPKIP00000017310	RRM_1	PF00076.22	2.6e-09	1	1
ENSPKIP00000017256	RRM_1	PF00076.22	6.4e-08	1	1
ENSPKIP00000017353	PWI	PF01480.17	1.2e-13	1	1
ENSPKIP00000017310	PWI	PF01480.17	1.2e-13	1	1
ENSPKIP00000017256	PWI	PF01480.17	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000041765	-	4362	-	ENSPKIP00000017256	825 (aa)	XP_023691751	UPI000CD5D76D
ENSPKIT00000041863	-	2442	-	ENSPKIP00000017353	813 (aa)	-	-
ENSPKIT00000041820	-	4227	-	ENSPKIP00000017310	820 (aa)	XP_023691752	UPI000CD60458
ENSPKIT00000041711	-	5137	-	ENSPKIP00000017203	685 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000003203's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000003203's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000003203	rbm25b	54	79.954	ENSG00000119707	RBM25	100	80.469	Homo_sapiens
ENSPKIG00000003203	rbm25b	57	75.314	ENSAPOG00000015321	rbm25b	58	77.521	Acanthochromis_polyacanthus
ENSPKIG00000003203	rbm25b	57	77.755	ENSAPOG00000017757	rbm25a	57	78.316	Acanthochromis_polyacanthus
ENSPKIG00000003203	rbm25b	54	79.727	ENSAMEG00000016270	RBM25	100	73.458	Ailuropoda_melanoleuca
ENSPKIG00000003203	rbm25b	57	77.615	ENSACIG00000019482	rbm25a	57	77.615	Amphilophus_citrinellus
ENSPKIG00000003203	rbm25b	57	75.053	ENSAOCG00000019308	rbm25b	57	75.480	Amphiprion_ocellaris
ENSPKIG00000003203	rbm25b	57	78.419	ENSAOCG00000013695	rbm25a	56	77.991	Amphiprion_ocellaris
ENSPKIG00000003203	rbm25b	57	78.419	ENSAPEG00000007514	rbm25a	58	77.568	Amphiprion_percula
ENSPKIG00000003203	rbm25b	58	77.500	ENSAPEG00000009666	rbm25b	60	77.474	Amphiprion_percula
ENSPKIG00000003203	rbm25b	57	76.858	ENSATEG00000017312	rbm25b	58	77.282	Anabas_testudineus
ENSPKIG00000003203	rbm25b	57	77.615	ENSATEG00000020676	rbm25a	63	76.203	Anabas_testudineus
ENSPKIG00000003203	rbm25b	54	80.822	ENSAPLG00000006643	RBM25	55	76.395	Anas_platyrhynchos
ENSPKIG00000003203	rbm25b	53	79.954	ENSACAG00000016239	RBM25	51	77.253	Anolis_carolinensis
ENSPKIG00000003203	rbm25b	54	79.954	ENSANAG00000028295	RBM25	98	75.517	Aotus_nancymaae
ENSPKIG00000003203	rbm25b	57	77.966	ENSACLG00000024359	rbm25b	58	78.316	Astatotilapia_calliptera
ENSPKIG00000003203	rbm25b	89	80.131	ENSACLG00000027482	rbm25a	83	80.415	Astatotilapia_calliptera
ENSPKIG00000003203	rbm25b	100	77.751	ENSAMXG00000024525	rbm25b	52	77.176	Astyanax_mexicanus
ENSPKIG00000003203	rbm25b	54	79.727	ENSBTAG00000017177	RBM25	100	72.696	Bos_taurus
ENSPKIG00000003203	rbm25b	54	33.108	WBGene00012245	W04D2.6	78	34.389	Caenorhabditis_elegans
ENSPKIG00000003203	rbm25b	54	79.727	ENSCJAG00000014441	-	98	75.862	Callithrix_jacchus
ENSPKIG00000003203	rbm25b	54	79.271	ENSTSYG00000003024	RBM25	98	75.862	Carlito_syrichta
ENSPKIG00000003203	rbm25b	51	81.522	ENSCAPG00000005239	RBM25	95	82.418	Cavia_aperea
ENSPKIG00000003203	rbm25b	54	79.727	ENSCPOG00000002479	RBM25	100	72.696	Cavia_porcellus
ENSPKIG00000003203	rbm25b	54	79.727	ENSCATG00000039651	RBM25	98	75.862	Cercocebus_atys
ENSPKIG00000003203	rbm25b	54	79.727	ENSCLAG00000003977	RBM25	100	72.696	Chinchilla_lanigera
ENSPKIG00000003203	rbm25b	54	79.727	ENSCSAG00000012801	RBM25	100	72.696	Chlorocebus_sabaeus
ENSPKIG00000003203	rbm25b	64	86.667	ENSCHOG00000008903	RBM25	63	86.667	Choloepus_hoffmanni
ENSPKIG00000003203	rbm25b	54	72.437	ENSCANG00000043874	RBM25	98	75.862	Colobus_angolensis_palliatus
ENSPKIG00000003203	rbm25b	98	74.848	ENSCGRG00001020817	Rbm25	88	77.682	Cricetulus_griseus_chok1gshd
ENSPKIG00000003203	rbm25b	56	75.546	ENSCSEG00000009430	rbm25a	59	73.069	Cynoglossus_semilaevis
ENSPKIG00000003203	rbm25b	58	75.262	ENSCSEG00000020737	rbm25b	58	74.788	Cynoglossus_semilaevis
ENSPKIG00000003203	rbm25b	57	70.600	ENSCVAG00000005498	rbm25a	99	75.128	Cyprinodon_variegatus
ENSPKIG00000003203	rbm25b	75	79.008	ENSDARG00000006395	rbm25b	58	75.770	Danio_rerio
ENSPKIG00000003203	rbm25b	53	70.345	ENSDARG00000039266	rbm25a	99	97.468	Danio_rerio
ENSPKIG00000003203	rbm25b	54	79.499	ENSDNOG00000004959	RBM25	100	72.582	Dasypus_novemcinctus
ENSPKIG00000003203	rbm25b	54	78.815	ENSDORG00000013247	Rbm25	100	69.738	Dipodomys_ordii
ENSPKIG00000003203	rbm25b	86	72.414	FBgn0028474	CG4119	51	61.972	Drosophila_melanogaster
ENSPKIG00000003203	rbm25b	54	78.360	ENSETEG00000015941	RBM25	100	71.086	Echinops_telfairi
ENSPKIG00000003203	rbm25b	71	39.542	ENSEBUG00000002963	rbm25b	62	40.941	Eptatretus_burgeri
ENSPKIG00000003203	rbm25b	86	79.215	ENSEEUG00000007350	RBM25	81	79.908	Erinaceus_europaeus
ENSPKIG00000003203	rbm25b	57	77.433	ENSELUG00000007730	rbm25b	58	77.778	Esox_lucius
ENSPKIG00000003203	rbm25b	56	69.783	ENSELUG00000021847	rbm25a	53	68.308	Esox_lucius
ENSPKIG00000003203	rbm25b	54	79.727	ENSFCAG00000011716	RBM25	98	75.862	Felis_catus
ENSPKIG00000003203	rbm25b	54	79.727	ENSFDAG00000006542	RBM25	100	72.696	Fukomys_damarensis
ENSPKIG00000003203	rbm25b	58	74.004	ENSFHEG00000003513	rbm25b	59	73.529	Fundulus_heteroclitus
ENSPKIG00000003203	rbm25b	100	68.616	ENSFHEG00000005318	rbm25a	60	82.661	Fundulus_heteroclitus
ENSPKIG00000003203	rbm25b	79	78.027	ENSGMOG00000014070	rbm25a	85	76.395	Gadus_morhua
ENSPKIG00000003203	rbm25b	84	73.246	ENSGMOG00000014097	rbm25b	63	74.561	Gadus_morhua
ENSPKIG00000003203	rbm25b	100	76.456	ENSGAFG00000018036	rbm25a	57	75.365	Gambusia_affinis
ENSPKIG00000003203	rbm25b	99	72.170	ENSGAFG00000001092	rbm25b	51	75.365	Gambusia_affinis
ENSPKIG00000003203	rbm25b	54	79.954	ENSGGOG00000002415	RBM25	98	75.862	Gorilla_gorilla
ENSPKIG00000003203	rbm25b	56	80.131	ENSHBUG00000016908	rbm25a	57	79.036	Haplochromis_burtoni
ENSPKIG00000003203	rbm25b	57	77.754	ENSHBUG00000018499	rbm25b	58	78.105	Haplochromis_burtoni
ENSPKIG00000003203	rbm25b	54	79.727	ENSHGLG00000014745	RBM25	100	72.696	Heterocephalus_glaber_female
ENSPKIG00000003203	rbm25b	54	80.137	ENSHGLG00100018236	-	95	83.333	Heterocephalus_glaber_male
ENSPKIG00000003203	rbm25b	95	65.000	ENSHCOG00000018433	rbm25a	53	75.373	Hippocampus_comes
ENSPKIG00000003203	rbm25b	100	67.857	ENSHCOG00000000142	rbm25b	56	72.824	Hippocampus_comes
ENSPKIG00000003203	rbm25b	54	79.727	ENSSTOG00000011117	RBM25	100	72.696	Ictidomys_tridecemlineatus
ENSPKIG00000003203	rbm25b	95	73.408	ENSKMAG00000016242	rbm25a	54	74.885	Kryptolebias_marmoratus
ENSPKIG00000003203	rbm25b	56	76.282	ENSKMAG00000018826	rbm25b	58	76.778	Kryptolebias_marmoratus
ENSPKIG00000003203	rbm25b	100	74.029	ENSLBEG00000010667	rbm25b	58	75.314	Labrus_bergylta
ENSPKIG00000003203	rbm25b	100	79.880	ENSLACG00000011845	RBM25	98	78.916	Latimeria_chalumnae
ENSPKIG00000003203	rbm25b	54	79.727	ENSMFAG00000040040	RBM25	98	75.862	Macaca_fascicularis
ENSPKIG00000003203	rbm25b	54	79.727	ENSMMUG00000002332	RBM25	98	78.866	Macaca_mulatta
ENSPKIG00000003203	rbm25b	54	79.043	ENSMNEG00000032922	RBM25	100	70.475	Macaca_nemestrina
ENSPKIG00000003203	rbm25b	54	79.727	ENSMLEG00000035157	RBM25	98	75.862	Mandrillus_leucophaeus
ENSPKIG00000003203	rbm25b	53	76.690	ENSMAMG00000000165	rbm25a	51	77.672	Mastacembelus_armatus
ENSPKIG00000003203	rbm25b	57	77.966	ENSMZEG00005001453	rbm25b	58	78.316	Maylandia_zebra
ENSPKIG00000003203	rbm25b	56	80.131	ENSMZEG00005011183	rbm25a	57	79.036	Maylandia_zebra
ENSPKIG00000003203	rbm25b	54	80.822	ENSMGAG00000011707	RBM25	100	71.379	Meleagris_gallopavo
ENSPKIG00000003203	rbm25b	54	79.727	ENSMICG00000034082	RBM25	98	75.517	Microcebus_murinus
ENSPKIG00000003203	rbm25b	54	79.954	ENSMOCG00000001935	Rbm25	100	70.810	Microtus_ochrogaster
ENSPKIG00000003203	rbm25b	57	77.586	ENSMMOG00000009065	rbm25a	57	77.186	Mola_mola
ENSPKIG00000003203	rbm25b	54	80.410	ENSMODG00000006820	RBM25	99	73.432	Monodelphis_domestica
ENSPKIG00000003203	rbm25b	58	75.052	ENSMALG00000020441	rbm25b	90	76.261	Monopterus_albus
ENSPKIG00000003203	rbm25b	54	79.954	MGP_CAROLIEiJ_G0017921	Rbm25	95	82.258	Mus_caroli
ENSPKIG00000003203	rbm25b	54	79.954	ENSMUSG00000010608	Rbm25	95	82.258	Mus_musculus
ENSPKIG00000003203	rbm25b	54	79.954	MGP_PahariEiJ_G0029677	Rbm25	95	82.258	Mus_pahari
ENSPKIG00000003203	rbm25b	54	79.271	MGP_SPRETEiJ_G0018766	-	95	82.258	Mus_spretus
ENSPKIG00000003203	rbm25b	54	79.727	ENSMPUG00000003698	RBM25	99	72.833	Mustela_putorius_furo
ENSPKIG00000003203	rbm25b	55	74.215	ENSMLUG00000024167	-	53	72.532	Myotis_lucifugus
ENSPKIG00000003203	rbm25b	57	71.487	ENSMLUG00000015434	-	51	72.532	Myotis_lucifugus
ENSPKIG00000003203	rbm25b	55	79.431	ENSNBRG00000003761	rbm25a	57	79.036	Neolamprologus_brichardi
ENSPKIG00000003203	rbm25b	54	79.727	ENSNLEG00000002701	RBM25	98	75.862	Nomascus_leucogenys
ENSPKIG00000003203	rbm25b	54	80.410	ENSOANG00000001056	RBM25	98	73.379	Ornithorhynchus_anatinus
ENSPKIG00000003203	rbm25b	100	68.985	ENSOCUG00000013737	RBM25	100	72.582	Oryctolagus_cuniculus
ENSPKIG00000003203	rbm25b	57	74.530	ENSORLG00000011874	rbm25b	58	74.316	Oryzias_latipes
ENSPKIG00000003203	rbm25b	57	74.739	ENSORLG00020016422	rbm25b	58	74.419	Oryzias_latipes_hni
ENSPKIG00000003203	rbm25b	57	74.739	ENSORLG00015011269	rbm25b	58	74.526	Oryzias_latipes_hsok
ENSPKIG00000003203	rbm25b	57	75.472	ENSOMEG00000023172	rbm25b	58	75.681	Oryzias_melastigma
ENSPKIG00000003203	rbm25b	52	74.058	ENSOMEG00000022138	rbm25a	59	72.470	Oryzias_melastigma
ENSPKIG00000003203	rbm25b	54	79.909	ENSOGAG00000014986	RBM25	100	73.318	Otolemur_garnettii
ENSPKIG00000003203	rbm25b	54	79.727	ENSOARG00000000319	RBM25	100	72.696	Ovis_aries
ENSPKIG00000003203	rbm25b	54	79.954	ENSPPAG00000039402	RBM25	98	75.862	Pan_paniscus
ENSPKIG00000003203	rbm25b	54	79.727	ENSPPRG00000017374	RBM25	98	75.862	Panthera_pardus
ENSPKIG00000003203	rbm25b	54	79.727	ENSPTIG00000017309	RBM25	98	75.862	Panthera_tigris_altaica
ENSPKIG00000003203	rbm25b	54	79.954	ENSPTRG00000006509	RBM25	98	75.862	Pan_troglodytes
ENSPKIG00000003203	rbm25b	54	79.727	ENSPANG00000018212	RBM25	98	75.862	Papio_anubis
ENSPKIG00000003203	rbm25b	57	77.433	ENSPMGG00000015740	rbm25b	59	76.520	Periophthalmus_magnuspinnatus
ENSPKIG00000003203	rbm25b	52	65.808	ENSPMGG00000001791	rbm25a	99	65.358	Periophthalmus_magnuspinnatus
ENSPKIG00000003203	rbm25b	54	73.349	ENSPCIG00000011166	RBM25	64	66.974	Phascolarctos_cinereus
ENSPKIG00000003203	rbm25b	58	72.840	ENSPFOG00000018808	rbm25b	58	75.314	Poecilia_formosa
ENSPKIG00000003203	rbm25b	100	76.914	ENSPLAG00000018338	rbm25a	57	75.891	Poecilia_latipinna
ENSPKIG00000003203	rbm25b	58	72.634	ENSPMEG00000019161	rbm25b	57	73.640	Poecilia_mexicana
ENSPKIG00000003203	rbm25b	100	76.914	ENSPMEG00000024470	rbm25a	50	87.425	Poecilia_mexicana
ENSPKIG00000003203	rbm25b	58	72.951	ENSPREG00000008522	rbm25b	58	75.208	Poecilia_reticulata
ENSPKIG00000003203	rbm25b	100	76.642	ENSPREG00000009228	rbm25a	57	77.612	Poecilia_reticulata
ENSPKIG00000003203	rbm25b	82	80.085	ENSPCAG00000006226	RBM25	79	79.915	Procavia_capensis
ENSPKIG00000003203	rbm25b	54	79.727	ENSPCOG00000023107	RBM25	98	75.862	Propithecus_coquereli
ENSPKIG00000003203	rbm25b	54	79.727	ENSPVAG00000003931	RBM25	100	70.193	Pteropus_vampyrus
ENSPKIG00000003203	rbm25b	56	80.131	ENSPNYG00000022596	rbm25a	51	80.415	Pundamilia_nyererei
ENSPKIG00000003203	rbm25b	95	75.190	ENSPNAG00000012024	rbm25b	58	78.692	Pygocentrus_nattereri
ENSPKIG00000003203	rbm25b	54	79.727	ENSRBIG00000039904	RBM25	98	75.862	Rhinopithecus_bieti
ENSPKIG00000003203	rbm25b	54	79.727	ENSRROG00000035556	RBM25	97	78.866	Rhinopithecus_roxellana
ENSPKIG00000003203	rbm25b	63	83.058	ENSSBOG00000034153	RBM25	63	72.199	Saimiri_boliviensis_boliviensis
ENSPKIG00000003203	rbm25b	54	80.410	ENSSHAG00000012859	RBM25	100	73.690	Sarcophilus_harrisii
ENSPKIG00000003203	rbm25b	100	92.354	ENSSFOG00015007093	rbm25	100	92.840	Scleropages_formosus
ENSPKIG00000003203	rbm25b	58	75.413	ENSSMAG00000002520	rbm25b	58	75.783	Scophthalmus_maximus
ENSPKIG00000003203	rbm25b	57	78.903	ENSSMAG00000009745	rbm25a	58	77.824	Scophthalmus_maximus
ENSPKIG00000003203	rbm25b	95	73.494	ENSSDUG00000017984	rbm25a	59	78.661	Seriola_dumerili
ENSPKIG00000003203	rbm25b	95	73.343	ENSSLDG00000010342	rbm25a	58	78.661	Seriola_lalandi_dorsalis
ENSPKIG00000003203	rbm25b	56	78.186	ENSSLDG00000024573	rbm25b	95	79.224	Seriola_lalandi_dorsalis
ENSPKIG00000003203	rbm25b	54	79.727	ENSSARG00000002327	RBM25	100	72.696	Sorex_araneus
ENSPKIG00000003203	rbm25b	57	76.375	ENSSPAG00000011114	rbm25a	58	76.289	Stegastes_partitus
ENSPKIG00000003203	rbm25b	58	76.507	ENSSPAG00000016168	rbm25b	58	77.101	Stegastes_partitus
ENSPKIG00000003203	rbm25b	57	74.786	ENSTRUG00000003076	rbm25a	58	73.673	Takifugu_rubripes
ENSPKIG00000003203	rbm25b	57	75.105	ENSTRUG00000017964	rbm25b	58	74.423	Takifugu_rubripes
ENSPKIG00000003203	rbm25b	95	66.502	ENSTNIG00000012222	rbm25b	65	75.229	Tetraodon_nigroviridis
ENSPKIG00000003203	rbm25b	62	83.465	ENSTBEG00000010538	-	68	81.731	Tupaia_belangeri
ENSPKIG00000003203	rbm25b	88	77.542	ENSVPAG00000009052	RBM25	78	77.350	Vicugna_pacos
ENSPKIG00000003203	rbm25b	54	79.727	ENSVVUG00000004426	RBM25	98	73.379	Vulpes_vulpes
ENSPKIG00000003203	rbm25b	95	66.502	ENSXETG00000021857	rbm25	56	74.249	Xenopus_tropicalis
ENSPKIG00000003203	rbm25b	100	70.241	ENSXCOG00000002222	rbm25b	56	68.750	Xiphophorus_couchianus
ENSPKIG00000003203	rbm25b	100	76.116	ENSXCOG00000004043	RBM25	58	74.793	Xiphophorus_couchianus
ENSPKIG00000003203	rbm25b	100	73.357	ENSXMAG00000009077	RBM25	59	72.441	Xiphophorus_maculatus
ENSPKIG00000003203	rbm25b	100	72.406	ENSXMAG00000017290	rbm25b	58	74.844	Xiphophorus_maculatus