EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000003379 (Gene tree)
Gene ID: 111848170
Gene Symbol: opa1
Alias: -
Full Name: OPA1%2C mitochondrial dynamin like GTPase
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 41378 bases
Position: chrPGUA01000178.1:1065283-1106660
Accession: 111848170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000017890	MMR_HSR1	PF01926.23	3.1e-05	1	1
ENSPKIP00000017827	MMR_HSR1	PF01926.23	3.1e-05	1	1
ENSPKIP00000017766	MMR_HSR1	PF01926.23	3.5e-05	1	1
ENSPKIP00000017692	MMR_HSR1	PF01926.23	3.7e-05	1	1
ENSPKIP00000017623	MMR_HSR1	PF01926.23	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000042346	-	6753	-	ENSPKIP00000017827	977 (aa)	XP_023675741	UPI000CD628D5
ENSPKIT00000042137	-	6946	-	ENSPKIP00000017623	1030 (aa)	-	-
ENSPKIT00000042285	-	6867	-	ENSPKIP00000017766	1015 (aa)	-	-
ENSPKIT00000042484	-	2763	-	ENSPKIP00000017961	920 (aa)	-	-
ENSPKIT00000042208	-	6892	-	ENSPKIP00000017692	1012 (aa)	-	-
ENSPKIT00000042410	-	6705	-	ENSPKIP00000017890	961 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000003379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000003379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000003379	opa1	100	75.782	ENSPKIG00000006473	OPA1	99	75.782

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000003379	opa1	99	91.512	ENSAPOG00000011980	opa1	97	91.020	Acanthochromis_polyacanthus
ENSPKIG00000003379	opa1	89	91.221	ENSACIG00000012521	opa1	97	91.221	Amphilophus_citrinellus
ENSPKIG00000003379	opa1	99	91.645	ENSAOCG00000020559	opa1	98	91.393	Amphiprion_ocellaris
ENSPKIG00000003379	opa1	100	83.537	ENSAPEG00000001641	opa1	97	89.495	Amphiprion_percula
ENSPKIG00000003379	opa1	100	85.772	ENSAMXG00000012295	opa1	99	92.497	Astyanax_mexicanus
ENSPKIG00000003379	opa1	90	51.960	WBGene00001134	eat-3	92	51.732	Caenorhabditis_elegans
ENSPKIG00000003379	opa1	98	75.783	ENSCSEG00000014266	opa1	95	84.937	Cynoglossus_semilaevis
ENSPKIG00000003379	opa1	100	82.171	ENSCVAG00000002438	opa1	100	82.171	Cyprinodon_variegatus
ENSPKIG00000003379	opa1	100	85.393	ENSDARG00000070801	opa1	100	85.393	Danio_rerio
ENSPKIG00000003379	opa1	91	54.659	FBgn0261276	Opa1	92	54.596	Drosophila_melanogaster
ENSPKIG00000003379	opa1	88	90.949	ENSFHEG00000003616	opa1	97	90.949	Fundulus_heteroclitus
ENSPKIG00000003379	opa1	100	82.622	ENSGACG00000009278	opa1	100	82.825	Gasterosteus_aculeatus
ENSPKIG00000003379	opa1	98	82.952	ENSHBUG00000005897	opa1	99	82.952	Haplochromis_burtoni
ENSPKIG00000003379	opa1	100	83.198	ENSHCOG00000016756	opa1	99	91.090	Hippocampus_comes
ENSPKIG00000003379	opa1	77	89.262	ENSKMAG00000009415	opa1	96	89.262	Kryptolebias_marmoratus
ENSPKIG00000003379	opa1	88	88.128	ENSMMOG00000008891	opa1	98	87.656	Mola_mola
ENSPKIG00000003379	opa1	100	83.537	ENSMALG00000016968	opa1	100	83.537	Monopterus_albus
ENSPKIG00000003379	opa1	90	90.959	ENSNBRG00000020394	opa1	98	91.071	Neolamprologus_brichardi
ENSPKIG00000003379	opa1	89	90.822	ENSPNYG00000021747	opa1	98	90.822	Pundamilia_nyererei
ENSPKIG00000003379	opa1	100	85.874	ENSPNAG00000001917	opa1	98	92.769	Pygocentrus_nattereri
ENSPKIG00000003379	opa1	97	82.396	ENSSFOG00015009303	OPA1	97	82.396	Scleropages_formosus
ENSPKIG00000003379	opa1	87	91.504	ENSSMAG00000001797	opa1	96	91.504	Scophthalmus_maximus
ENSPKIG00000003379	opa1	73	90.148	ENSSDUG00000004968	opa1	99	90.148	Seriola_dumerili
ENSPKIG00000003379	opa1	100	81.757	ENSSLDG00000011089	opa1	100	82.239	Seriola_lalandi_dorsalis
ENSPKIG00000003379	opa1	100	84.146	ENSSPAG00000018388	opa1	100	84.350	Stegastes_partitus
ENSPKIG00000003379	opa1	78	81.582	ENSXCOG00000003267	opa1	92	81.582	Xiphophorus_couchianus
ENSPKIG00000003379	opa1	77	89.892	ENSXMAG00000005593	opa1	99	89.892	Xiphophorus_maculatus