EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000003398 (Gene tree)
Gene ID: 111844665
Gene Symbol: -
Alias: -
Full Name: survival of motor neuron protein-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 7052 bases
Position: chrPGUA01000137.1:1423742-1430793
Accession: 111844665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000017515	SMN	PF06003.12	1.2e-40	1	2
ENSPKIP00000017515	SMN	PF06003.12	1.2e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000042028	-	2181	-	ENSPKIP00000017515	367 (aa)	XP_023669102	UPI000CD5FC38

Gene Model

Click here to download ENSPKIG00000003398's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000003398's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000003398	-	94	33.835	ENSPKIG00000011096	smn1	51	33.083

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000003398	-	75	57.407	ENSATEG00000005614	-	75	57.407	Anabas_testudineus
ENSPKIG00000003398	-	74	35.069	ENSACLG00000002833	-	77	35.192	Astatotilapia_calliptera
ENSPKIG00000003398	-	50	34.483	ENSCPBG00000012368	-	70	35.468	Chrysemys_picta_bellii
ENSPKIG00000003398	-	52	54.237	ENSMAMG00000016192	-	99	30.728	Mastacembelus_armatus
ENSPKIG00000003398	-	74	35.069	ENSMZEG00005003112	-	77	35.192	Maylandia_zebra
ENSPKIG00000003398	-	95	32.713	ENSMALG00000020522	-	98	31.302	Monopterus_albus
ENSPKIG00000003398	-	94	51.966	ENSSFOG00015022042	-	91	51.676	Scleropages_formosus