EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000003422 (Gene tree)
Gene ID: 111834057
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 7530 bases
Position: chrPGUA01000468.1:185759-193288
Accession: 111834057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000017563	Nop52	PF05997.12	1.2e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000042074	-	2551	-	ENSPKIP00000017563	823 (aa)	XP_023648713	UPI000CD636B2

Gene Model

Click here to download ENSPKIG00000003422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000003422's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000003422	-	59	57.895	ENSAPOG00000007490	-	52	56.915	Acanthochromis_polyacanthus
ENSPKIG00000003422	-	66	50.420	ENSAMEG00000011401	RRP1B	65	51.261	Ailuropoda_melanoleuca
ENSPKIG00000003422	-	55	67.500	ENSAOCG00000017894	-	99	64.835	Amphiprion_ocellaris
ENSPKIG00000003422	-	59	57.143	ENSAPEG00000024150	-	52	57.527	Amphiprion_percula
ENSPKIG00000003422	-	60	60.150	ENSATEG00000005045	-	51	60.686	Anabas_testudineus
ENSPKIG00000003422	-	69	50.000	ENSACAG00000017851	RRP1B	68	47.586	Anolis_carolinensis
ENSPKIG00000003422	-	72	49.265	ENSBTAG00000017418	RRP1B	78	49.265	Bos_taurus
ENSPKIG00000003422	-	50	44.417	ENSCJAG00000043205	RRP1	70	47.443	Callithrix_jacchus
ENSPKIG00000003422	-	61	50.000	ENSCAFG00020018901	RRP1B	75	50.833	Canis_lupus_dingo
ENSPKIG00000003422	-	61	51.471	ENSCHIG00000021519	RRP1B	81	51.471	Capra_hircus
ENSPKIG00000003422	-	57	52.212	ENSCPOG00000002396	RRP1B	66	52.212	Cavia_porcellus
ENSPKIG00000003422	-	52	43.357	ENSCCAG00000029828	RRP1	74	47.578	Cebus_capucinus
ENSPKIG00000003422	-	54	39.246	ENSCLAG00000011639	RRP1	82	41.710	Chinchilla_lanigera
ENSPKIG00000003422	-	60	51.095	ENSCLAG00000005622	RRP1B	72	51.095	Chinchilla_lanigera
ENSPKIG00000003422	-	52	32.662	ENSCING00000003304	-	59	42.857	Ciona_intestinalis
ENSPKIG00000003422	-	57	52.941	ENSCGRG00001023882	-	62	67.606	Cricetulus_griseus_chok1gshd
ENSPKIG00000003422	-	59	58.268	ENSCSEG00000020711	-	92	54.695	Cynoglossus_semilaevis
ENSPKIG00000003422	-	50	42.790	ENSDNOG00000019880	RRP1	75	45.869	Dasypus_novemcinctus
ENSPKIG00000003422	-	54	54.651	ENSETEG00000019489	RRP1B	58	54.651	Echinops_telfairi
ENSPKIG00000003422	-	75	60.169	ENSELUG00000015885	-	88	59.204	Esox_lucius
ENSPKIG00000003422	-	61	53.333	ENSFCAG00000010272	RRP1B	79	53.333	Felis_catus
ENSPKIG00000003422	-	54	51.261	ENSFDAG00000010899	RRP1B	64	51.261	Fukomys_damarensis
ENSPKIG00000003422	-	54	40.716	ENSFDAG00000013728	RRP1	82	43.523	Fukomys_damarensis
ENSPKIG00000003422	-	63	53.500	ENSFHEG00000016314	-	55	57.270	Fundulus_heteroclitus
ENSPKIG00000003422	-	59	54.701	ENSGMOG00000001953	-	69	54.701	Gadus_morhua
ENSPKIG00000003422	-	52	48.252	ENSGALG00000035696	RRP1B	55	48.148	Gallus_gallus
ENSPKIG00000003422	-	84	47.926	ENSGACG00000001438	rrp1	84	57.516	Gasterosteus_aculeatus
ENSPKIG00000003422	-	62	51.538	ENSHGLG00000004968	RRP1B	67	51.538	Heterocephalus_glaber_female
ENSPKIG00000003422	-	57	51.538	ENSHGLG00100002232	RRP1B	61	51.538	Heterocephalus_glaber_male
ENSPKIG00000003422	-	83	54.032	ENSHCOG00000018388	-	80	54.032	Hippocampus_comes
ENSPKIG00000003422	-	64	55.526	ENSIPUG00000000673	-	73	54.948	Ictalurus_punctatus
ENSPKIG00000003422	-	67	55.629	ENSKMAG00000005539	rrp1	77	56.614	Kryptolebias_marmoratus
ENSPKIG00000003422	-	78	46.888	ENSLACG00000017332	-	99	38.171	Latimeria_chalumnae
ENSPKIG00000003422	-	58	62.432	ENSLOCG00000004064	-	73	61.266	Lepisosteus_oculatus
ENSPKIG00000003422	-	55	44.690	ENSLAFG00000000766	RRP1B	87	47.423	Loxodonta_africana
ENSPKIG00000003422	-	55	52.941	ENSMAUG00000021508	Rrp1b	62	52.941	Mesocricetus_auratus
ENSPKIG00000003422	-	57	52.101	ENSMOCG00000001117	Rrp1b	63	52.101	Microtus_ochrogaster
ENSPKIG00000003422	-	59	47.333	ENSMUSG00000058392	Rrp1b	60	64.789	Mus_musculus
ENSPKIG00000003422	-	61	47.682	MGP_SPRETEiJ_G0022290	Rrp1b	60	64.789	Mus_spretus
ENSPKIG00000003422	-	62	50.769	ENSMLUG00000007738	RRP1B	76	50.769	Myotis_lucifugus
ENSPKIG00000003422	-	97	38.078	ENSNLEG00000001490	RRP1B	100	37.805	Nomascus_leucogenys
ENSPKIG00000003422	-	55	52.101	ENSODEG00000013177	RRP1B	64	52.101	Octodon_degus
ENSPKIG00000003422	-	77	49.580	ENSOCUG00000025931	RRP1B	61	51.261	Oryctolagus_cuniculus
ENSPKIG00000003422	-	64	56.250	ENSORLG00020007199	-	57	57.447	Oryzias_latipes_hni
ENSPKIG00000003422	-	58	51.786	ENSOGAG00000009872	RRP1B	74	51.786	Otolemur_garnettii
ENSPKIG00000003422	-	56	53.982	ENSOARG00000011314	RRP1B	76	53.982	Ovis_aries
ENSPKIG00000003422	-	56	53.333	ENSPTIG00000016894	RRP1B	78	53.333	Panthera_tigris_altaica
ENSPKIG00000003422	-	62	47.799	ENSPEMG00000022490	Rrp1b	70	47.799	Peromyscus_maniculatus_bairdii
ENSPKIG00000003422	-	55	41.758	ENSPCIG00000015523	-	77	45.055	Phascolarctos_cinereus
ENSPKIG00000003422	-	60	51.003	ENSPCIG00000015513	RRP1B	52	50.524	Phascolarctos_cinereus
ENSPKIG00000003422	-	72	55.690	ENSPMEG00000007042	-	61	57.254	Poecilia_mexicana
ENSPKIG00000003422	-	64	57.393	ENSPREG00000015673	-	60	59.140	Poecilia_reticulata
ENSPKIG00000003422	-	60	51.163	ENSPVAG00000001436	RRP1B	66	51.163	Pteropus_vampyrus
ENSPKIG00000003422	-	50	44.146	ENSSBOG00000034689	RRP1	74	46.705	Saimiri_boliviensis_boliviensis
ENSPKIG00000003422	-	61	63.032	ENSSMAG00000016847	-	87	58.289	Scophthalmus_maximus
ENSPKIG00000003422	-	58	64.286	ENSSDUG00000000551	-	78	59.184	Seriola_dumerili
ENSPKIG00000003422	-	58	64.286	ENSSLDG00000002538	-	72	59.184	Seriola_lalandi_dorsalis
ENSPKIG00000003422	-	51	50.365	ENSSARG00000003108	-	61	50.365	Sorex_araneus
ENSPKIG00000003422	-	61	59.441	ENSSPAG00000005370	-	54	59.441	Stegastes_partitus
ENSPKIG00000003422	-	57	59.524	ENSSSCG00000021698	RRP1B	68	59.524	Sus_scrofa
ENSPKIG00000003422	-	74	62.651	ENSTNIG00000005053	rrp1	95	62.651	Tetraodon_nigroviridis
ENSPKIG00000003422	-	58	46.705	ENSTBEG00000000422	RRP1B	79	46.041	Tupaia_belangeri
ENSPKIG00000003422	-	61	48.739	ENSTTRG00000000723	RRP1B	68	48.739	Tursiops_truncatus
ENSPKIG00000003422	-	61	49.580	ENSUAMG00000026765	RRP1B	71	49.580	Ursus_americanus
ENSPKIG00000003422	-	58	46.588	ENSUMAG00000025510	RRP1B	85	48.696	Ursus_maritimus
ENSPKIG00000003422	-	57	46.450	ENSXETG00000013683	rrp1b	69	46.903	Xenopus_tropicalis