EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000003683 (Gene tree)
Gene ID: 111851338
Gene Symbol: urb1
Alias: -
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 20014 bases
Position: chrPGUA01000023.1:1943397-1963410
Accession: 111851338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000017964	Npa1	PF11707.8	1.5e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000042487	-	7383	XM_023826165	ENSPKIP00000017964	2260 (aa)	XP_023681933	UPI000CD5FA21

Gene Model

Click here to download ENSPKIG00000003683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000003683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000003683	urb1	96	46.181	ENSG00000142207	URB1	99	45.519	Homo_sapiens
ENSPKIG00000003683	urb1	99	57.242	ENSAPOG00000020308	urb1	99	57.242	Acanthochromis_polyacanthus
ENSPKIG00000003683	urb1	98	46.297	ENSAMEG00000011998	URB1	98	46.195	Ailuropoda_melanoleuca
ENSPKIG00000003683	urb1	94	52.238	ENSACIG00000003248	urb1	97	51.888	Amphilophus_citrinellus
ENSPKIG00000003683	urb1	99	49.846	ENSAOCG00000010364	urb1	99	49.606	Amphiprion_ocellaris
ENSPKIG00000003683	urb1	99	51.427	ENSAPEG00000010758	urb1	99	51.182	Amphiprion_percula
ENSPKIG00000003683	urb1	99	52.509	ENSATEG00000011790	urb1	99	52.420	Anabas_testudineus
ENSPKIG00000003683	urb1	96	46.859	ENSAPLG00000012791	URB1	99	46.971	Anas_platyrhynchos
ENSPKIG00000003683	urb1	97	45.915	ENSACAG00000002817	URB1	98	45.990	Anolis_carolinensis
ENSPKIG00000003683	urb1	98	45.917	ENSANAG00000024617	URB1	99	45.799	Aotus_nancymaae
ENSPKIG00000003683	urb1	98	54.747	ENSACLG00000024865	urb1	99	54.150	Astatotilapia_calliptera
ENSPKIG00000003683	urb1	98	49.307	ENSAMXG00000012306	urb1	99	49.218	Astyanax_mexicanus
ENSPKIG00000003683	urb1	96	46.875	ENSBTAG00000012412	URB1	97	46.864	Bos_taurus
ENSPKIG00000003683	urb1	98	45.447	ENSCJAG00000009118	URB1	99	45.371	Callithrix_jacchus
ENSPKIG00000003683	urb1	96	46.390	ENSCAFG00000008892	URB1	97	46.301	Canis_familiaris
ENSPKIG00000003683	urb1	96	45.572	ENSCAFG00020025994	-	97	45.483	Canis_lupus_dingo
ENSPKIG00000003683	urb1	96	46.223	ENSCAFG00020025987	-	97	46.133	Canis_lupus_dingo
ENSPKIG00000003683	urb1	96	46.998	ENSCHIG00000015645	URB1	97	46.930	Capra_hircus
ENSPKIG00000003683	urb1	98	45.310	ENSTSYG00000013286	URB1	99	45.274	Carlito_syrichta
ENSPKIG00000003683	urb1	97	45.487	ENSCAPG00000015589	URB1	99	45.398	Cavia_aperea
ENSPKIG00000003683	urb1	98	46.232	ENSCPOG00000006748	URB1	99	46.100	Cavia_porcellus
ENSPKIG00000003683	urb1	98	46.079	ENSCCAG00000021299	URB1	99	45.892	Cebus_capucinus
ENSPKIG00000003683	urb1	98	45.738	ENSCATG00000042630	URB1	99	45.683	Cercocebus_atys
ENSPKIG00000003683	urb1	98	47.004	ENSCLAG00000005262	URB1	99	46.960	Chinchilla_lanigera
ENSPKIG00000003683	urb1	98	45.046	ENSCSAG00000009584	URB1	99	45.046	Chlorocebus_sabaeus
ENSPKIG00000003683	urb1	96	48.365	ENSCPBG00000006454	URB1	99	47.943	Chrysemys_picta_bellii
ENSPKIG00000003683	urb1	98	46.106	ENSCANG00000031088	URB1	99	46.039	Colobus_angolensis_palliatus
ENSPKIG00000003683	urb1	98	45.784	ENSCGRG00001010616	Urb1	99	45.688	Cricetulus_griseus_chok1gshd
ENSPKIG00000003683	urb1	97	45.831	ENSCGRG00000015840	Urb1	99	45.694	Cricetulus_griseus_crigri
ENSPKIG00000003683	urb1	99	51.309	ENSCSEG00000012616	urb1	99	50.914	Cynoglossus_semilaevis
ENSPKIG00000003683	urb1	95	51.828	ENSCVAG00000009076	urb1	98	51.937	Cyprinodon_variegatus
ENSPKIG00000003683	urb1	99	51.692	ENSDARG00000060308	urb1	99	51.560	Danio_rerio
ENSPKIG00000003683	urb1	83	49.765	ENSDNOG00000015586	URB1	98	49.765	Dasypus_novemcinctus
ENSPKIG00000003683	urb1	96	46.858	ENSDORG00000006735	Urb1	97	46.768	Dipodomys_ordii
ENSPKIG00000003683	urb1	88	58.513	ENSETEG00000009080	URB1	89	58.513	Echinops_telfairi
ENSPKIG00000003683	urb1	98	44.916	ENSEASG00005007711	URB1	98	45.935	Equus_asinus_asinus
ENSPKIG00000003683	urb1	93	56.588	ENSECAG00000013206	URB1	99	56.588	Equus_caballus
ENSPKIG00000003683	urb1	52	60.251	ENSEEUG00000003626	-	50	60.870	Erinaceus_europaeus
ENSPKIG00000003683	urb1	99	54.422	ENSELUG00000020516	urb1	99	54.641	Esox_lucius
ENSPKIG00000003683	urb1	98	46.150	ENSFCAG00000002177	URB1	99	46.324	Felis_catus
ENSPKIG00000003683	urb1	97	42.731	ENSFALG00000004636	URB1	99	42.655	Ficedula_albicollis
ENSPKIG00000003683	urb1	99	46.335	ENSFDAG00000007288	URB1	95	46.271	Fukomys_damarensis
ENSPKIG00000003683	urb1	98	50.785	ENSFHEG00000000202	urb1	99	50.277	Fundulus_heteroclitus
ENSPKIG00000003683	urb1	92	54.426	ENSGMOG00000001838	urb1	94	54.426	Gadus_morhua
ENSPKIG00000003683	urb1	98	46.528	ENSGALG00000015887	URB1	99	46.422	Gallus_gallus
ENSPKIG00000003683	urb1	99	50.154	ENSGAFG00000020694	urb1	99	49.868	Gambusia_affinis
ENSPKIG00000003683	urb1	97	54.041	ENSGACG00000011703	urb1	99	53.904	Gasterosteus_aculeatus
ENSPKIG00000003683	urb1	97	48.055	ENSGAGG00000022544	URB1	99	48.145	Gopherus_agassizii
ENSPKIG00000003683	urb1	98	46.025	ENSGGOG00000000285	URB1	99	45.852	Gorilla_gorilla
ENSPKIG00000003683	urb1	98	54.703	ENSHBUG00000001904	urb1	99	54.106	Haplochromis_burtoni
ENSPKIG00000003683	urb1	98	46.127	ENSHGLG00000004907	URB1	99	46.127	Heterocephalus_glaber_female
ENSPKIG00000003683	urb1	98	46.473	ENSHGLG00100010749	URB1	99	46.473	Heterocephalus_glaber_male
ENSPKIG00000003683	urb1	73	56.452	ENSHCOG00000018683	urb1	98	56.452	Hippocampus_comes
ENSPKIG00000003683	urb1	99	48.884	ENSIPUG00000014721	urb1	99	48.884	Ictalurus_punctatus
ENSPKIG00000003683	urb1	96	46.109	ENSSTOG00000004539	URB1	97	46.244	Ictidomys_tridecemlineatus
ENSPKIG00000003683	urb1	99	48.085	ENSKMAG00000006001	urb1	99	53.798	Kryptolebias_marmoratus
ENSPKIG00000003683	urb1	96	50.700	ENSLBEG00000027208	urb1	99	50.180	Labrus_bergylta
ENSPKIG00000003683	urb1	99	44.237	ENSLACG00000017059	URB1	99	44.348	Latimeria_chalumnae
ENSPKIG00000003683	urb1	99	53.470	ENSLOCG00000009190	urb1	99	53.339	Lepisosteus_oculatus
ENSPKIG00000003683	urb1	98	46.752	ENSLAFG00000010407	URB1	99	46.498	Loxodonta_africana
ENSPKIG00000003683	urb1	98	45.870	ENSMFAG00000034391	URB1	95	45.727	Macaca_fascicularis
ENSPKIG00000003683	urb1	98	45.826	ENSMMUG00000010295	URB1	99	45.727	Macaca_mulatta
ENSPKIG00000003683	urb1	98	45.246	ENSMNEG00000032981	URB1	99	45.146	Macaca_nemestrina
ENSPKIG00000003683	urb1	98	45.914	ENSMLEG00000041435	URB1	99	45.859	Mandrillus_leucophaeus
ENSPKIG00000003683	urb1	99	52.002	ENSMAMG00000011238	urb1	99	51.868	Mastacembelus_armatus
ENSPKIG00000003683	urb1	98	49.538	ENSMZEG00005011862	urb1	99	48.910	Maylandia_zebra
ENSPKIG00000003683	urb1	97	46.652	ENSMGAG00000014512	URB1	99	46.601	Meleagris_gallopavo
ENSPKIG00000003683	urb1	91	54.925	ENSMAUG00000010516	Urb1	99	54.925	Mesocricetus_auratus
ENSPKIG00000003683	urb1	98	45.903	ENSMICG00000016424	URB1	99	45.784	Microcebus_murinus
ENSPKIG00000003683	urb1	98	45.475	ENSMOCG00000012613	Urb1	99	45.430	Microtus_ochrogaster
ENSPKIG00000003683	urb1	98	44.954	ENSMODG00000021076	URB1	99	44.875	Monodelphis_domestica
ENSPKIG00000003683	urb1	99	50.704	ENSMALG00000017411	urb1	99	50.659	Monopterus_albus
ENSPKIG00000003683	urb1	98	45.607	MGP_CAROLIEiJ_G0020948	Urb1	98	45.519	Mus_caroli
ENSPKIG00000003683	urb1	98	45.551	ENSMUSG00000039929	Urb1	98	45.499	Mus_musculus
ENSPKIG00000003683	urb1	98	45.430	MGP_PahariEiJ_G0016653	Urb1	98	45.386	Mus_pahari
ENSPKIG00000003683	urb1	96	45.927	MGP_SPRETEiJ_G0021854	Urb1	97	45.882	Mus_spretus
ENSPKIG00000003683	urb1	98	47.263	ENSMPUG00000001123	URB1	99	47.258	Mustela_putorius_furo
ENSPKIG00000003683	urb1	98	43.988	ENSNGAG00000001905	Urb1	98	44.027	Nannospalax_galili
ENSPKIG00000003683	urb1	81	53.002	ENSNBRG00000001049	urb1	99	53.002	Neolamprologus_brichardi
ENSPKIG00000003683	urb1	96	45.007	ENSNLEG00000026872	URB1	99	44.396	Nomascus_leucogenys
ENSPKIG00000003683	urb1	88	58.935	ENSMEUG00000010828	URB1	94	43.016	Notamacropus_eugenii
ENSPKIG00000003683	urb1	98	44.829	ENSOPRG00000013482	URB1	99	44.829	Ochotona_princeps
ENSPKIG00000003683	urb1	98	46.534	ENSODEG00000002587	URB1	99	46.446	Octodon_degus
ENSPKIG00000003683	urb1	99	54.945	ENSONIG00000005599	urb1	99	54.725	Oreochromis_niloticus
ENSPKIG00000003683	urb1	98	46.770	ENSOCUG00000009381	URB1	99	46.726	Oryctolagus_cuniculus
ENSPKIG00000003683	urb1	99	52.343	ENSORLG00000003429	urb1	99	52.103	Oryzias_latipes
ENSPKIG00000003683	urb1	99	52.275	ENSORLG00020013785	urb1	99	52.079	Oryzias_latipes_hni
ENSPKIG00000003683	urb1	99	50.788	ENSORLG00015019421	urb1	98	53.154	Oryzias_latipes_hsok
ENSPKIG00000003683	urb1	77	57.547	ENSOMEG00000002094	urb1	98	57.547	Oryzias_melastigma
ENSPKIG00000003683	urb1	99	45.790	ENSOGAG00000017140	URB1	99	45.605	Otolemur_garnettii
ENSPKIG00000003683	urb1	92	50.309	ENSOARG00000013679	URB1	84	50.309	Ovis_aries
ENSPKIG00000003683	urb1	98	45.815	ENSPPAG00000003423	URB1	99	45.499	Pan_paniscus
ENSPKIG00000003683	urb1	98	46.317	ENSPPRG00000023131	URB1	99	46.304	Panthera_pardus
ENSPKIG00000003683	urb1	87	46.897	ENSPTIG00000016125	URB1	94	47.147	Panthera_tigris_altaica
ENSPKIG00000003683	urb1	98	45.727	ENSPTRG00000013852	URB1	99	45.410	Pan_troglodytes
ENSPKIG00000003683	urb1	98	46.002	ENSPANG00000021964	URB1	99	45.947	Papio_anubis
ENSPKIG00000003683	urb1	98	46.086	ENSPEMG00000021205	Urb1	98	45.994	Peromyscus_maniculatus_bairdii
ENSPKIG00000003683	urb1	76	34.594	ENSPMAG00000009733	URB1	99	34.978	Petromyzon_marinus
ENSPKIG00000003683	urb1	98	44.391	ENSPCIG00000016350	URB1	99	44.540	Phascolarctos_cinereus
ENSPKIG00000003683	urb1	95	51.867	ENSPLAG00000004371	urb1	99	51.776	Poecilia_latipinna
ENSPKIG00000003683	urb1	99	52.168	ENSPMEG00000006634	urb1	99	52.081	Poecilia_mexicana
ENSPKIG00000003683	urb1	99	52.195	ENSPREG00000013453	urb1	99	52.107	Poecilia_reticulata
ENSPKIG00000003683	urb1	96	46.291	ENSPPYG00000011359	URB1	99	45.671	Pongo_abelii
ENSPKIG00000003683	urb1	98	41.231	ENSPCAG00000007430	URB1	99	41.366	Procavia_capensis
ENSPKIG00000003683	urb1	98	45.855	ENSPCOG00000022695	URB1	99	45.835	Propithecus_coquereli
ENSPKIG00000003683	urb1	98	44.967	ENSPVAG00000000889	URB1	99	44.987	Pteropus_vampyrus
ENSPKIG00000003683	urb1	98	52.618	ENSPNYG00000010589	urb1	99	52.327	Pundamilia_nyererei
ENSPKIG00000003683	urb1	99	49.473	ENSPNAG00000019324	urb1	99	49.429	Pygocentrus_nattereri
ENSPKIG00000003683	urb1	98	45.146	ENSRNOG00000002080	Urb1	98	45.205	Rattus_norvegicus
ENSPKIG00000003683	urb1	98	46.211	ENSRBIG00000033122	URB1	99	46.072	Rhinopithecus_bieti
ENSPKIG00000003683	urb1	98	46.123	ENSRROG00000040237	URB1	99	45.984	Rhinopithecus_roxellana
ENSPKIG00000003683	urb1	98	46.011	ENSSBOG00000027672	URB1	99	45.892	Saimiri_boliviensis_boliviensis
ENSPKIG00000003683	urb1	98	43.898	ENSSHAG00000005140	URB1	99	43.907	Sarcophilus_harrisii
ENSPKIG00000003683	urb1	92	64.548	ENSSFOG00015000339	urb1	99	64.692	Scleropages_formosus
ENSPKIG00000003683	urb1	98	54.461	ENSSMAG00000003782	urb1	99	54.052	Scophthalmus_maximus
ENSPKIG00000003683	urb1	99	55.259	ENSSDUG00000012313	urb1	99	55.166	Seriola_dumerili
ENSPKIG00000003683	urb1	99	54.892	ENSSLDG00000023179	urb1	99	54.757	Seriola_lalandi_dorsalis
ENSPKIG00000003683	urb1	99	46.588	ENSSPUG00000012447	URB1	99	46.591	Sphenodon_punctatus
ENSPKIG00000003683	urb1	99	53.671	ENSSPAG00000006325	urb1	99	53.409	Stegastes_partitus
ENSPKIG00000003683	urb1	98	46.068	ENSSSCG00000032024	URB1	99	46.058	Sus_scrofa
ENSPKIG00000003683	urb1	73	49.106	ENSTGUG00000013442	URB1	100	48.866	Taeniopygia_guttata
ENSPKIG00000003683	urb1	99	51.556	ENSTRUG00000009372	urb1	100	51.424	Takifugu_rubripes
ENSPKIG00000003683	urb1	98	51.355	ENSTNIG00000016277	urb1	99	51.222	Tetraodon_nigroviridis
ENSPKIG00000003683	urb1	66	52.326	ENSTBEG00000010044	URB1	67	52.326	Tupaia_belangeri
ENSPKIG00000003683	urb1	87	52.428	ENSTTRG00000007712	URB1	92	50.883	Tursiops_truncatus
ENSPKIG00000003683	urb1	98	46.345	ENSUAMG00000012231	URB1	98	46.280	Ursus_americanus
ENSPKIG00000003683	urb1	86	48.113	ENSUMAG00000017419	URB1	94	48.098	Ursus_maritimus
ENSPKIG00000003683	urb1	64	64.423	ENSVPAG00000001164	URB1	67	64.423	Vicugna_pacos
ENSPKIG00000003683	urb1	96	46.616	ENSVVUG00000000551	URB1	97	46.464	Vulpes_vulpes
ENSPKIG00000003683	urb1	98	46.427	ENSXETG00000009895	urb1	99	46.014	Xenopus_tropicalis
ENSPKIG00000003683	urb1	99	49.406	ENSXCOG00000005500	urb1	99	49.406	Xiphophorus_couchianus
ENSPKIG00000003683	urb1	99	49.494	ENSXMAG00000007253	urb1	99	49.274	Xiphophorus_maculatus