EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000003728 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: -
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 5332 bases
Position: chrPGUA01000014.1:4591352-4596683
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000018014	LSM	PF01423.22	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000042540	-	375	-	ENSPKIP00000018014	124 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000003728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000003728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000003728	oscp1a	56	35.714	ENSPKIG00000006154	lsm4	50	35.714
ENSPKIG00000003728	oscp1a	60	31.081	ENSPKIG00000003985	SNRPD1	62	31.081
ENSPKIG00000003728	oscp1a	56	35.616	ENSPKIG00000007028	si:ch73-14h10.2	77	35.616

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000003728	oscp1a	99	64.228	ENSG00000181817	LSM10	100	64.228	Homo_sapiens
ENSPKIG00000003728	oscp1a	97	66.667	ENSAMEG00000019854	LSM10	98	66.667	Ailuropoda_melanoleuca
ENSPKIG00000003728	oscp1a	96	72.269	ENSACIG00000015420	oscp1a	79	72.269	Amphilophus_citrinellus
ENSPKIG00000003728	oscp1a	96	73.950	ENSAOCG00000014654	-	98	73.950	Amphiprion_ocellaris
ENSPKIG00000003728	oscp1a	96	73.950	ENSAOCG00000015618	LSM10	98	73.950	Amphiprion_ocellaris
ENSPKIG00000003728	oscp1a	94	66.935	ENSAOCG00000015607	LSM10	96	66.935	Amphiprion_ocellaris
ENSPKIG00000003728	oscp1a	94	66.935	ENSAPEG00000021851	LSM10	96	66.935	Amphiprion_percula
ENSPKIG00000003728	oscp1a	96	73.950	ENSAPEG00000021845	-	98	73.950	Amphiprion_percula
ENSPKIG00000003728	oscp1a	94	74.138	ENSATEG00000006310	oscp1a	86	74.138	Anabas_testudineus
ENSPKIG00000003728	oscp1a	94	62.393	ENSACAG00000001231	LSM10	95	62.393	Anolis_carolinensis
ENSPKIG00000003728	oscp1a	97	65.000	ENSANAG00000031489	-	98	65.000	Aotus_nancymaae
ENSPKIG00000003728	oscp1a	99	65.041	ENSANAG00000018759	-	100	65.041	Aotus_nancymaae
ENSPKIG00000003728	oscp1a	96	74.790	ENSACLG00000004728	oscp1a	97	74.790	Astatotilapia_calliptera
ENSPKIG00000003728	oscp1a	93	75.652	ENSAMXG00000025301	oscp1a	95	75.652	Astyanax_mexicanus
ENSPKIG00000003728	oscp1a	97	65.833	ENSBTAG00000024096	LSM10	98	65.833	Bos_taurus
ENSPKIG00000003728	oscp1a	99	65.854	ENSCJAG00000044880	LSM10	100	65.854	Callithrix_jacchus
ENSPKIG00000003728	oscp1a	97	66.667	ENSCAFG00000003382	LSM10	98	66.667	Canis_familiaris
ENSPKIG00000003728	oscp1a	97	66.667	ENSCAFG00020008920	LSM10	98	66.667	Canis_lupus_dingo
ENSPKIG00000003728	oscp1a	97	65.833	ENSCHIG00000009398	LSM10	98	65.833	Capra_hircus
ENSPKIG00000003728	oscp1a	97	67.500	ENSCAPG00000012567	LSM10	98	67.500	Cavia_aperea
ENSPKIG00000003728	oscp1a	97	67.500	ENSCPOG00000039302	LSM10	98	67.500	Cavia_porcellus
ENSPKIG00000003728	oscp1a	97	64.167	ENSCCAG00000008378	-	98	64.167	Cebus_capucinus
ENSPKIG00000003728	oscp1a	99	65.041	ENSCCAG00000018913	-	100	65.041	Cebus_capucinus
ENSPKIG00000003728	oscp1a	97	65.000	ENSCATG00000006589	LSM10	98	65.000	Cercocebus_atys
ENSPKIG00000003728	oscp1a	97	65.833	ENSCLAG00000008633	LSM10	98	65.833	Chinchilla_lanigera
ENSPKIG00000003728	oscp1a	97	65.000	ENSCSAG00000000134	LSM10	98	65.000	Chlorocebus_sabaeus
ENSPKIG00000003728	oscp1a	97	63.934	ENSCHOG00000008615	LSM10	98	63.934	Choloepus_hoffmanni
ENSPKIG00000003728	oscp1a	77	34.375	ENSCING00000024984	-	83	34.375	Ciona_intestinalis
ENSPKIG00000003728	oscp1a	80	34.343	ENSCSAVG00000001896	-	85	34.343	Ciona_savignyi
ENSPKIG00000003728	oscp1a	97	65.000	ENSCANG00000019928	LSM10	98	65.000	Colobus_angolensis_palliatus
ENSPKIG00000003728	oscp1a	97	65.833	ENSCGRG00001004317	-	98	65.833	Cricetulus_griseus_chok1gshd
ENSPKIG00000003728	oscp1a	92	59.483	ENSCGRG00001022673	-	93	59.483	Cricetulus_griseus_chok1gshd
ENSPKIG00000003728	oscp1a	97	65.833	ENSCGRG00000014935	-	98	65.833	Cricetulus_griseus_crigri
ENSPKIG00000003728	oscp1a	92	59.483	ENSCGRG00000015514	-	93	59.483	Cricetulus_griseus_crigri
ENSPKIG00000003728	oscp1a	96	73.950	ENSCSEG00000010374	oscp1a	80	73.950	Cynoglossus_semilaevis
ENSPKIG00000003728	oscp1a	95	69.492	ENSCVAG00000001536	oscp1a	89	69.492	Cyprinodon_variegatus
ENSPKIG00000003728	oscp1a	69	75.294	ENSDARG00000109563	CABZ01074453.1	99	75.294	Danio_rerio
ENSPKIG00000003728	oscp1a	97	76.667	ENSDARG00000101222	oscp1a	99	76.667	Danio_rerio
ENSPKIG00000003728	oscp1a	97	67.500	ENSDNOG00000036662	LSM10	98	67.500	Dasypus_novemcinctus
ENSPKIG00000003728	oscp1a	97	65.833	ENSDORG00000007579	Lsm10	98	65.833	Dipodomys_ordii
ENSPKIG00000003728	oscp1a	97	64.167	ENSETEG00000005703	LSM10	98	64.167	Echinops_telfairi
ENSPKIG00000003728	oscp1a	94	51.282	ENSEBUG00000001312	oscp1a	96	51.282	Eptatretus_burgeri
ENSPKIG00000003728	oscp1a	97	65.833	ENSEASG00005012194	LSM10	98	65.833	Equus_asinus_asinus
ENSPKIG00000003728	oscp1a	97	65.833	ENSECAG00000005071	LSM10	98	65.833	Equus_caballus
ENSPKIG00000003728	oscp1a	97	66.667	ENSEEUG00000012032	LSM10	98	66.667	Erinaceus_europaeus
ENSPKIG00000003728	oscp1a	97	81.667	ENSELUG00000007452	oscp1a	98	81.667	Esox_lucius
ENSPKIG00000003728	oscp1a	94	70.085	ENSFALG00000000851	LSM10	95	70.085	Ficedula_albicollis
ENSPKIG00000003728	oscp1a	97	66.667	ENSFDAG00000021056	LSM10	98	66.667	Fukomys_damarensis
ENSPKIG00000003728	oscp1a	90	73.451	ENSFHEG00000001058	oscp1a	97	73.451	Fundulus_heteroclitus
ENSPKIG00000003728	oscp1a	95	65.254	ENSGMOG00000019832	oscp1a	99	65.254	Gadus_morhua
ENSPKIG00000003728	oscp1a	96	69.748	ENSGALG00000002127	LSM10	97	69.748	Gallus_gallus
ENSPKIG00000003728	oscp1a	86	69.159	ENSGAFG00000016445	oscp1a	87	69.159	Gambusia_affinis
ENSPKIG00000003728	oscp1a	97	76.667	ENSGACG00000002329	oscp1a	98	76.667	Gasterosteus_aculeatus
ENSPKIG00000003728	oscp1a	94	67.521	ENSGAGG00000024848	LSM10	95	67.521	Gopherus_agassizii
ENSPKIG00000003728	oscp1a	99	64.228	ENSGGOG00000003556	LSM10	100	64.228	Gorilla_gorilla
ENSPKIG00000003728	oscp1a	96	75.630	ENSHBUG00000001722	oscp1a	97	75.630	Haplochromis_burtoni
ENSPKIG00000003728	oscp1a	97	66.667	ENSHGLG00000011625	LSM10	98	66.667	Heterocephalus_glaber_female
ENSPKIG00000003728	oscp1a	97	66.667	ENSHGLG00100001769	LSM10	98	66.667	Heterocephalus_glaber_male
ENSPKIG00000003728	oscp1a	85	76.415	ENSIPUG00000005808	oscp1a	92	76.415	Ictalurus_punctatus
ENSPKIG00000003728	oscp1a	97	66.667	ENSSTOG00000000606	LSM10	98	66.667	Ictidomys_tridecemlineatus
ENSPKIG00000003728	oscp1a	96	75.630	ENSKMAG00000012143	oscp1a	98	75.630	Kryptolebias_marmoratus
ENSPKIG00000003728	oscp1a	98	69.421	ENSLBEG00000017764	oscp1a	99	69.421	Labrus_bergylta
ENSPKIG00000003728	oscp1a	94	62.393	ENSLACG00000015904	LSM10	90	62.393	Latimeria_chalumnae
ENSPKIG00000003728	oscp1a	98	74.380	ENSLOCG00000018277	oscp1a	99	74.380	Lepisosteus_oculatus
ENSPKIG00000003728	oscp1a	97	65.000	ENSLAFG00000009600	LSM10	98	65.000	Loxodonta_africana
ENSPKIG00000003728	oscp1a	97	65.000	ENSMFAG00000009115	LSM10	98	65.000	Macaca_fascicularis
ENSPKIG00000003728	oscp1a	97	65.000	ENSMMUG00000017338	LSM10	98	65.000	Macaca_mulatta
ENSPKIG00000003728	oscp1a	97	65.000	ENSMNEG00000020023	LSM10	98	65.000	Macaca_nemestrina
ENSPKIG00000003728	oscp1a	97	65.000	ENSMLEG00000025150	LSM10	98	65.000	Mandrillus_leucophaeus
ENSPKIG00000003728	oscp1a	98	72.727	ENSMAMG00000004427	oscp1a	99	72.727	Mastacembelus_armatus
ENSPKIG00000003728	oscp1a	96	74.790	ENSMZEG00005026307	oscp1a	97	74.790	Maylandia_zebra
ENSPKIG00000003728	oscp1a	96	68.067	ENSMGAG00000015707	LSM10	97	68.067	Meleagris_gallopavo
ENSPKIG00000003728	oscp1a	97	65.833	ENSMAUG00000016624	Lsm10	98	65.833	Mesocricetus_auratus
ENSPKIG00000003728	oscp1a	97	66.667	ENSMOCG00000021943	Lsm10	98	66.667	Microtus_ochrogaster
ENSPKIG00000003728	oscp1a	98	77.869	ENSMMOG00000013597	oscp1a	91	77.869	Mola_mola
ENSPKIG00000003728	oscp1a	97	68.333	ENSMODG00000023328	LSM10	98	68.333	Monodelphis_domestica
ENSPKIG00000003728	oscp1a	59	67.949	ENSMALG00000012661	oscp1a	61	67.949	Monopterus_albus
ENSPKIG00000003728	oscp1a	98	64.754	MGP_CAROLIEiJ_G0026467	Lsm10	100	67.742	Mus_caroli
ENSPKIG00000003728	oscp1a	98	64.754	ENSMUSG00000050188	Lsm10	100	67.742	Mus_musculus
ENSPKIG00000003728	oscp1a	98	64.754	MGP_PahariEiJ_G0028798	Lsm10	100	67.742	Mus_pahari
ENSPKIG00000003728	oscp1a	98	64.754	MGP_SPRETEiJ_G0027446	Lsm10	100	67.742	Mus_spretus
ENSPKIG00000003728	oscp1a	97	66.667	ENSMPUG00000018593	LSM10	98	66.667	Mustela_putorius_furo
ENSPKIG00000003728	oscp1a	97	67.500	ENSMLUG00000023895	LSM10	98	67.500	Myotis_lucifugus
ENSPKIG00000003728	oscp1a	97	64.167	ENSNGAG00000015011	Lsm10	98	64.167	Nannospalax_galili
ENSPKIG00000003728	oscp1a	97	74.167	ENSNBRG00000014306	oscp1a	98	74.167	Neolamprologus_brichardi
ENSPKIG00000003728	oscp1a	99	63.415	ENSNLEG00000033754	LSM10	100	63.415	Nomascus_leucogenys
ENSPKIG00000003728	oscp1a	94	70.085	ENSMEUG00000006313	LSM10	95	70.085	Notamacropus_eugenii
ENSPKIG00000003728	oscp1a	97	65.000	ENSOPRG00000001699	LSM10	98	65.000	Ochotona_princeps
ENSPKIG00000003728	oscp1a	97	65.833	ENSODEG00000019161	LSM10	98	65.833	Octodon_degus
ENSPKIG00000003728	oscp1a	98	74.380	ENSONIG00000020904	oscp1a	99	74.380	Oreochromis_niloticus
ENSPKIG00000003728	oscp1a	99	65.041	ENSOANG00000002066	LSM10	100	65.041	Ornithorhynchus_anatinus
ENSPKIG00000003728	oscp1a	97	65.000	ENSOCUG00000005333	LSM10	98	65.000	Oryctolagus_cuniculus
ENSPKIG00000003728	oscp1a	93	72.174	ENSORLG00000009504	oscp1a	95	72.174	Oryzias_latipes
ENSPKIG00000003728	oscp1a	93	72.174	ENSORLG00020016201	oscp1a	95	72.174	Oryzias_latipes_hni
ENSPKIG00000003728	oscp1a	93	71.304	ENSORLG00015007794	oscp1a	95	71.304	Oryzias_latipes_hsok
ENSPKIG00000003728	oscp1a	97	66.667	ENSOGAG00000002653	LSM10	98	66.667	Otolemur_garnettii
ENSPKIG00000003728	oscp1a	97	65.833	ENSOARG00000009596	LSM10	98	65.833	Ovis_aries
ENSPKIG00000003728	oscp1a	99	64.228	ENSPPAG00000023465	LSM10	100	64.228	Pan_paniscus
ENSPKIG00000003728	oscp1a	97	65.833	ENSPPRG00000014619	LSM10	98	65.833	Panthera_pardus
ENSPKIG00000003728	oscp1a	97	65.833	ENSPTIG00000004613	LSM10	98	65.833	Panthera_tigris_altaica
ENSPKIG00000003728	oscp1a	99	64.228	ENSPTRG00000000539	LSM10	100	64.228	Pan_troglodytes
ENSPKIG00000003728	oscp1a	97	65.000	ENSPANG00000023172	LSM10	98	65.000	Papio_anubis
ENSPKIG00000003728	oscp1a	94	66.667	ENSPSIG00000000590	LSM10	95	66.667	Pelodiscus_sinensis
ENSPKIG00000003728	oscp1a	62	72.727	ENSPMGG00000015718	oscp1a	100	72.727	Periophthalmus_magnuspinnatus
ENSPKIG00000003728	oscp1a	83	70.874	ENSPCIG00000014865	LSM10	76	70.874	Phascolarctos_cinereus
ENSPKIG00000003728	oscp1a	92	71.930	ENSPFOG00000020490	oscp1a	97	71.930	Poecilia_formosa
ENSPKIG00000003728	oscp1a	97	68.333	ENSPLAG00000016537	oscp1a	92	68.333	Poecilia_latipinna
ENSPKIG00000003728	oscp1a	90	69.643	ENSPMEG00000000174	oscp1a	97	69.643	Poecilia_mexicana
ENSPKIG00000003728	oscp1a	97	68.333	ENSPREG00000009899	oscp1a	92	68.333	Poecilia_reticulata
ENSPKIG00000003728	oscp1a	99	64.228	ENSPPYG00000001539	LSM10	100	64.228	Pongo_abelii
ENSPKIG00000003728	oscp1a	98	64.463	ENSPCAG00000002520	LSM10	99	64.463	Procavia_capensis
ENSPKIG00000003728	oscp1a	97	65.833	ENSPVAG00000008644	LSM10	98	65.833	Pteropus_vampyrus
ENSPKIG00000003728	oscp1a	96	75.630	ENSPNYG00000003138	oscp1a	97	75.630	Pundamilia_nyererei
ENSPKIG00000003728	oscp1a	94	78.448	ENSPNAG00000028829	oscp1a	96	78.448	Pygocentrus_nattereri
ENSPKIG00000003728	oscp1a	98	63.934	ENSRNOG00000025716	Lsm10	100	63.934	Rattus_norvegicus
ENSPKIG00000003728	oscp1a	97	65.000	ENSRBIG00000001561	LSM10	98	65.000	Rhinopithecus_bieti
ENSPKIG00000003728	oscp1a	97	65.000	ENSRROG00000011414	LSM10	98	65.000	Rhinopithecus_roxellana
ENSPKIG00000003728	oscp1a	99	65.041	ENSSBOG00000036413	-	100	65.041	Saimiri_boliviensis_boliviensis
ENSPKIG00000003728	oscp1a	94	70.085	ENSSHAG00000018056	LSM10	95	70.085	Sarcophilus_harrisii
ENSPKIG00000003728	oscp1a	97	74.167	ENSSFOG00015019954	lsm10	98	74.167	Scleropages_formosus
ENSPKIG00000003728	oscp1a	94	78.448	ENSSMAG00000001297	oscp1a	99	78.448	Scophthalmus_maximus
ENSPKIG00000003728	oscp1a	94	70.690	ENSSDUG00000007090	oscp1a	94	70.690	Seriola_dumerili
ENSPKIG00000003728	oscp1a	94	69.828	ENSSLDG00000000800	oscp1a	96	69.828	Seriola_lalandi_dorsalis
ENSPKIG00000003728	oscp1a	86	69.159	ENSSARG00000004211	LSM10	98	64.754	Sorex_araneus
ENSPKIG00000003728	oscp1a	94	76.068	ENSSPAG00000009229	oscp1a	97	76.068	Stegastes_partitus
ENSPKIG00000003728	oscp1a	99	63.415	ENSSSCG00000038916	LSM10	100	63.415	Sus_scrofa
ENSPKIG00000003728	oscp1a	94	70.940	ENSTGUG00000001602	-	96	70.940	Taeniopygia_guttata
ENSPKIG00000003728	oscp1a	94	70.085	ENSTGUG00000001600	-	96	70.085	Taeniopygia_guttata
ENSPKIG00000003728	oscp1a	97	70.833	ENSTRUG00000010531	oscp1a	97	70.833	Takifugu_rubripes
ENSPKIG00000003728	oscp1a	99	64.228	ENSTBEG00000016674	LSM10	100	64.228	Tupaia_belangeri
ENSPKIG00000003728	oscp1a	97	66.667	ENSUAMG00000020265	LSM10	98	66.667	Ursus_americanus
ENSPKIG00000003728	oscp1a	97	66.667	ENSUMAG00000001438	LSM10	55	66.667	Ursus_maritimus
ENSPKIG00000003728	oscp1a	97	66.667	ENSVVUG00000023209	LSM10	98	66.667	Vulpes_vulpes
ENSPKIG00000003728	oscp1a	99	63.415	ENSXETG00000027631	lsm10	100	63.415	Xenopus_tropicalis
ENSPKIG00000003728	oscp1a	98	69.421	ENSXCOG00000018776	oscp1a	76	69.421	Xiphophorus_couchianus
ENSPKIG00000003728	oscp1a	90	71.429	ENSXMAG00000019963	oscp1a	90	71.429	Xiphophorus_maculatus