EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000003985 (Gene tree)
Gene ID: 111848888
Gene Symbol: SNRPD1
Alias: -
Full Name: small nuclear ribonucleoprotein Sm D1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 6695 bases
Position: chrPGUA01000186.1:182388-189082
Accession: 111848888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000018410	LSM	PF01423.22	2.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000036244	SNRPD1-201	4233	-	ENSPKIP00000018410	119 (aa)	XP_023677010	UPI000CD5CEB6

Gene Model

Click here to download ENSPKIG00000003985's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000003985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000003985	SNRPD1	62	31.081	ENSPKIG00000003728	oscp1a	60	31.081
ENSPKIG00000003985	SNRPD1	94	97.321	ENSPKIG00000021610	snrpd1	100	97.321

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000003985	SNRPD1	100	97.479	ENSG00000167088	SNRPD1	100	97.479	Homo_sapiens
ENSPKIG00000003985	SNRPD1	100	98.319	ENSAPOG00000019446	snrpd1	65	98.319	Acanthochromis_polyacanthus
ENSPKIG00000003985	SNRPD1	98	95.726	ENSAMEG00000002576	SNRPD1	100	95.726	Ailuropoda_melanoleuca
ENSPKIG00000003985	SNRPD1	94	98.214	ENSACIG00000011263	snrpd1	100	98.214	Amphilophus_citrinellus
ENSPKIG00000003985	SNRPD1	100	98.319	ENSAOCG00000007406	snrpd1	100	98.319	Amphiprion_ocellaris
ENSPKIG00000003985	SNRPD1	94	98.214	ENSAPEG00000012539	SNRPD1	100	98.214	Amphiprion_percula
ENSPKIG00000003985	SNRPD1	100	94.118	ENSAPEG00000014961	snrpd1	100	94.118	Amphiprion_percula
ENSPKIG00000003985	SNRPD1	100	98.319	ENSATEG00000014399	snrpd1	100	98.319	Anabas_testudineus
ENSPKIG00000003985	SNRPD1	97	97.391	ENSAPLG00000012256	SNRPD1	97	97.391	Anas_platyrhynchos
ENSPKIG00000003985	SNRPD1	100	97.479	ENSACAG00000006364	SNRPD1	100	97.479	Anolis_carolinensis
ENSPKIG00000003985	SNRPD1	100	97.479	ENSANAG00000025641	SNRPD1	100	97.479	Aotus_nancymaae
ENSPKIG00000003985	SNRPD1	94	98.214	ENSACLG00000017406	snrpd1	100	98.214	Astatotilapia_calliptera
ENSPKIG00000003985	SNRPD1	100	97.479	ENSAMXG00000004589	snrpd1	100	97.479	Astyanax_mexicanus
ENSPKIG00000003985	SNRPD1	81	94.792	ENSBTAG00000012376	-	72	94.792	Bos_taurus
ENSPKIG00000003985	SNRPD1	94	93.750	ENSBTAG00000047266	-	94	93.750	Bos_taurus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSBTAG00000008292	SNRPD1	100	97.479	Bos_taurus
ENSPKIG00000003985	SNRPD1	79	91.489	ENSBTAG00000055316	-	81	91.489	Bos_taurus
ENSPKIG00000003985	SNRPD1	74	79.545	WBGene00004916	snr-3	76	75.000	Caenorhabditis_elegans
ENSPKIG00000003985	SNRPD1	100	97.479	ENSCJAG00000042955	SNRPD1	100	97.479	Callithrix_jacchus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSCAFG00000018247	SNRPD1	100	97.479	Canis_familiaris
ENSPKIG00000003985	SNRPD1	80	96.842	ENSCAFG00020015914	SNRPD1	74	96.842	Canis_lupus_dingo
ENSPKIG00000003985	SNRPD1	100	94.958	ENSCHIG00000005557	SNRPD1	100	94.958	Capra_hircus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSTSYG00000030028	SNRPD1	100	97.479	Carlito_syrichta
ENSPKIG00000003985	SNRPD1	97	96.522	ENSCAPG00000008103	SNRPD1	99	96.522	Cavia_aperea
ENSPKIG00000003985	SNRPD1	100	97.479	ENSCPOG00000004679	SNRPD1	100	97.479	Cavia_porcellus
ENSPKIG00000003985	SNRPD1	100	96.639	ENSCCAG00000020611	-	100	96.639	Cebus_capucinus
ENSPKIG00000003985	SNRPD1	94	94.643	ENSCCAG00000016652	-	94	94.643	Cebus_capucinus
ENSPKIG00000003985	SNRPD1	81	92.708	ENSCCAG00000005390	-	81	92.708	Cebus_capucinus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSCCAG00000032658	SNRPD1	100	97.479	Cebus_capucinus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSCATG00000039978	SNRPD1	100	97.479	Cercocebus_atys
ENSPKIG00000003985	SNRPD1	100	97.479	ENSCLAG00000008691	SNRPD1	100	97.479	Chinchilla_lanigera
ENSPKIG00000003985	SNRPD1	100	97.479	ENSCSAG00000017654	SNRPD1	100	97.479	Chlorocebus_sabaeus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSCPBG00000023143	SNRPD1	100	97.479	Chrysemys_picta_bellii
ENSPKIG00000003985	SNRPD1	72	86.047	ENSCING00000024100	-	69	86.047	Ciona_intestinalis
ENSPKIG00000003985	SNRPD1	73	82.759	ENSCSAVG00000004578	-	70	82.759	Ciona_savignyi
ENSPKIG00000003985	SNRPD1	100	97.479	ENSCGRG00001021055	-	100	97.479	Cricetulus_griseus_chok1gshd
ENSPKIG00000003985	SNRPD1	81	72.917	ENSCGRG00001009945	-	85	72.917	Cricetulus_griseus_chok1gshd
ENSPKIG00000003985	SNRPD1	100	97.479	ENSCGRG00000000490	-	100	97.479	Cricetulus_griseus_crigri
ENSPKIG00000003985	SNRPD1	81	72.917	ENSCGRG00000006224	-	85	72.917	Cricetulus_griseus_crigri
ENSPKIG00000003985	SNRPD1	100	96.639	ENSCSEG00000018141	snrpd1	100	96.639	Cynoglossus_semilaevis
ENSPKIG00000003985	SNRPD1	100	98.319	ENSCVAG00000000534	snrpd1	100	98.319	Cyprinodon_variegatus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSDARG00000011648	snrpd1	100	97.479	Danio_rerio
ENSPKIG00000003985	SNRPD1	100	97.479	ENSDNOG00000040310	SNRPD1	100	97.479	Dasypus_novemcinctus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSDORG00000008349	Snrpd1	100	97.479	Dipodomys_ordii
ENSPKIG00000003985	SNRPD1	79	81.915	FBgn0261933	SmD1	76	81.915	Drosophila_melanogaster
ENSPKIG00000003985	SNRPD1	74	96.591	ENSETEG00000011689	SNRPD1	74	96.591	Echinops_telfairi
ENSPKIG00000003985	SNRPD1	94	91.964	ENSEBUG00000003170	snrpd1	94	91.964	Eptatretus_burgeri
ENSPKIG00000003985	SNRPD1	94	97.321	ENSEASG00005002433	SNRPD1	100	97.321	Equus_asinus_asinus
ENSPKIG00000003985	SNRPD1	94	97.321	ENSECAG00000014373	SNRPD1	100	97.321	Equus_caballus
ENSPKIG00000003985	SNRPD1	75	96.629	ENSEEUG00000004987	SNRPD1	100	96.629	Erinaceus_europaeus
ENSPKIG00000003985	SNRPD1	93	85.586	ENSELUG00000000088	snrpd1	79	95.745	Esox_lucius
ENSPKIG00000003985	SNRPD1	100	97.479	ENSFCAG00000012352	SNRPD1	100	97.479	Felis_catus
ENSPKIG00000003985	SNRPD1	94	97.321	ENSFALG00000002646	SNRPD1	100	97.321	Ficedula_albicollis
ENSPKIG00000003985	SNRPD1	100	97.479	ENSGMOG00000015607	snrpd1	100	97.479	Gadus_morhua
ENSPKIG00000003985	SNRPD1	100	97.479	ENSGALG00000041334	SNRPD1	100	97.479	Gallus_gallus
ENSPKIG00000003985	SNRPD1	100	98.319	ENSGAFG00000011171	snrpd1	100	98.319	Gambusia_affinis
ENSPKIG00000003985	SNRPD1	100	97.479	ENSGACG00000005201	SNRPD1	100	97.479	Gasterosteus_aculeatus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSGAGG00000011197	SNRPD1	100	97.479	Gopherus_agassizii
ENSPKIG00000003985	SNRPD1	81	91.667	ENSGGOG00000026706	-	80	91.667	Gorilla_gorilla
ENSPKIG00000003985	SNRPD1	100	97.479	ENSGGOG00000041053	SNRPD1	100	97.479	Gorilla_gorilla
ENSPKIG00000003985	SNRPD1	100	98.319	ENSHBUG00000003236	snrpd1	100	98.319	Haplochromis_burtoni
ENSPKIG00000003985	SNRPD1	100	97.479	ENSHGLG00000007152	SNRPD1	100	97.479	Heterocephalus_glaber_female
ENSPKIG00000003985	SNRPD1	100	97.479	ENSHGLG00100008618	SNRPD1	100	97.479	Heterocephalus_glaber_male
ENSPKIG00000003985	SNRPD1	100	98.319	ENSIPUG00000003576	snrpd1	100	98.319	Ictalurus_punctatus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSSTOG00000000485	SNRPD1	100	97.479	Ictidomys_tridecemlineatus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSJJAG00000017698	Snrpd1	100	97.479	Jaculus_jaculus
ENSPKIG00000003985	SNRPD1	100	98.319	ENSKMAG00000005987	snrpd1	100	98.319	Kryptolebias_marmoratus
ENSPKIG00000003985	SNRPD1	100	98.319	ENSLBEG00000003327	snrpd1	100	98.319	Labrus_bergylta
ENSPKIG00000003985	SNRPD1	100	97.479	ENSLACG00000001955	SNRPD1	100	97.479	Latimeria_chalumnae
ENSPKIG00000003985	SNRPD1	98	96.581	ENSLOCG00000002003	snrpd1	100	96.581	Lepisosteus_oculatus
ENSPKIG00000003985	SNRPD1	93	95.495	ENSLAFG00000005819	SNRPD1	94	95.495	Loxodonta_africana
ENSPKIG00000003985	SNRPD1	100	97.479	ENSMFAG00000042080	SNRPD1	100	97.479	Macaca_fascicularis
ENSPKIG00000003985	SNRPD1	96	97.368	ENSMMUG00000003992	SNRPD1	97	97.368	Macaca_mulatta
ENSPKIG00000003985	SNRPD1	100	97.479	ENSMNEG00000041296	SNRPD1	100	97.479	Macaca_nemestrina
ENSPKIG00000003985	SNRPD1	100	97.479	ENSMLEG00000028659	SNRPD1	100	97.479	Mandrillus_leucophaeus
ENSPKIG00000003985	SNRPD1	100	98.319	ENSMAMG00000012971	snrpd1	100	98.319	Mastacembelus_armatus
ENSPKIG00000003985	SNRPD1	100	98.319	ENSMZEG00005004685	snrpd1	100	98.319	Maylandia_zebra
ENSPKIG00000003985	SNRPD1	97	97.391	ENSMGAG00000011598	SNRPD1	95	97.391	Meleagris_gallopavo
ENSPKIG00000003985	SNRPD1	81	80.208	ENSMAUG00000016467	-	86	80.208	Mesocricetus_auratus
ENSPKIG00000003985	SNRPD1	82	91.753	ENSMAUG00000006829	-	62	91.753	Mesocricetus_auratus
ENSPKIG00000003985	SNRPD1	81	80.208	ENSMAUG00000016502	-	86	80.208	Mesocricetus_auratus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSMICG00000044066	SNRPD1	100	97.479	Microcebus_murinus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSMOCG00000017367	Snrpd1	100	97.479	Microtus_ochrogaster
ENSPKIG00000003985	SNRPD1	100	98.319	ENSMMOG00000019089	snrpd1	100	98.319	Mola_mola
ENSPKIG00000003985	SNRPD1	100	97.479	ENSMODG00000021487	SNRPD1	100	97.479	Monodelphis_domestica
ENSPKIG00000003985	SNRPD1	100	98.319	ENSMALG00000014459	snrpd1	100	98.319	Monopterus_albus
ENSPKIG00000003985	SNRPD1	100	97.479	MGP_CAROLIEiJ_G0021994	Snrpd1	100	97.479	Mus_caroli
ENSPKIG00000003985	SNRPD1	100	97.479	ENSMUSG00000002477	Snrpd1	100	97.479	Mus_musculus
ENSPKIG00000003985	SNRPD1	100	97.479	MGP_PahariEiJ_G0018731	Snrpd1	100	97.479	Mus_pahari
ENSPKIG00000003985	SNRPD1	100	97.479	MGP_SPRETEiJ_G0022910	Snrpd1	100	97.479	Mus_spretus
ENSPKIG00000003985	SNRPD1	100	96.639	ENSMPUG00000020041	-	100	96.639	Mustela_putorius_furo
ENSPKIG00000003985	SNRPD1	98	95.726	ENSMPUG00000005567	-	100	95.726	Mustela_putorius_furo
ENSPKIG00000003985	SNRPD1	97	94.828	ENSMLUG00000009124	SNRPD1	90	94.828	Myotis_lucifugus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSNGAG00000023946	Snrpd1	100	97.479	Nannospalax_galili
ENSPKIG00000003985	SNRPD1	79	97.872	ENSNBRG00000012119	snrpd1	78	97.872	Neolamprologus_brichardi
ENSPKIG00000003985	SNRPD1	100	94.958	ENSNLEG00000031430	SNRPD1	100	94.958	Nomascus_leucogenys
ENSPKIG00000003985	SNRPD1	100	97.479	ENSODEG00000005764	SNRPD1	100	97.479	Octodon_degus
ENSPKIG00000003985	SNRPD1	100	98.319	ENSONIG00000002486	snrpd1	100	98.319	Oreochromis_niloticus
ENSPKIG00000003985	SNRPD1	82	87.755	ENSOANG00000004638	-	82	87.755	Ornithorhynchus_anatinus
ENSPKIG00000003985	SNRPD1	98	95.726	ENSOCUG00000023761	-	100	95.726	Oryctolagus_cuniculus
ENSPKIG00000003985	SNRPD1	100	96.639	ENSOCUG00000014399	-	100	96.639	Oryctolagus_cuniculus
ENSPKIG00000003985	SNRPD1	94	98.214	ENSORLG00000012516	snrpd1	100	98.214	Oryzias_latipes
ENSPKIG00000003985	SNRPD1	100	98.319	ENSORLG00020005743	snrpd1	100	98.319	Oryzias_latipes_hni
ENSPKIG00000003985	SNRPD1	100	98.319	ENSORLG00015013402	snrpd1	100	98.319	Oryzias_latipes_hsok
ENSPKIG00000003985	SNRPD1	100	98.319	ENSOMEG00000011571	snrpd1	100	98.319	Oryzias_melastigma
ENSPKIG00000003985	SNRPD1	100	94.118	ENSOGAG00000007833	SNRPD1	100	94.118	Otolemur_garnettii
ENSPKIG00000003985	SNRPD1	100	92.437	ENSOARG00000003413	-	85	92.437	Ovis_aries
ENSPKIG00000003985	SNRPD1	100	97.479	ENSPPAG00000042593	SNRPD1	100	97.479	Pan_paniscus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSPPRG00000002399	SNRPD1	100	97.479	Panthera_pardus
ENSPKIG00000003985	SNRPD1	94	70.536	ENSPPRG00000005009	-	92	70.536	Panthera_pardus
ENSPKIG00000003985	SNRPD1	96	97.368	ENSPTIG00000013206	SNRPD1	100	97.368	Panthera_tigris_altaica
ENSPKIG00000003985	SNRPD1	86	91.176	ENSPTRG00000050159	-	87	91.176	Pan_troglodytes
ENSPKIG00000003985	SNRPD1	100	97.479	ENSPTRG00000009909	SNRPD1	100	97.479	Pan_troglodytes
ENSPKIG00000003985	SNRPD1	100	97.479	ENSPANG00000023478	SNRPD1	100	97.479	Papio_anubis
ENSPKIG00000003985	SNRPD1	100	98.319	ENSPMGG00000001862	snrpd1	100	98.319	Periophthalmus_magnuspinnatus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSPEMG00000014773	-	100	97.479	Peromyscus_maniculatus_bairdii
ENSPKIG00000003985	SNRPD1	86	81.731	ENSPMAG00000003938	-	85	81.731	Petromyzon_marinus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSPCIG00000020320	SNRPD1	100	97.479	Phascolarctos_cinereus
ENSPKIG00000003985	SNRPD1	100	93.277	ENSPFOG00000012448	SNRPD1	100	93.277	Poecilia_formosa
ENSPKIG00000003985	SNRPD1	100	93.277	ENSPLAG00000006738	snrpd1	100	93.277	Poecilia_latipinna
ENSPKIG00000003985	SNRPD1	100	93.277	ENSPMEG00000021942	snrpd1	100	93.277	Poecilia_mexicana
ENSPKIG00000003985	SNRPD1	100	98.319	ENSPREG00000007094	snrpd1	100	98.319	Poecilia_reticulata
ENSPKIG00000003985	SNRPD1	100	97.479	ENSPPYG00000025874	SNRPD1	100	97.479	Pongo_abelii
ENSPKIG00000003985	SNRPD1	100	97.479	ENSPCOG00000013327	SNRPD1	100	97.479	Propithecus_coquereli
ENSPKIG00000003985	SNRPD1	100	97.479	ENSPVAG00000005511	SNRPD1	80	97.479	Pteropus_vampyrus
ENSPKIG00000003985	SNRPD1	100	96.639	ENSPNAG00000017824	snrpd1	100	96.639	Pygocentrus_nattereri
ENSPKIG00000003985	SNRPD1	100	97.479	ENSRNOG00000013714	Snrpd1	100	97.479	Rattus_norvegicus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSRBIG00000022996	SNRPD1	100	97.479	Rhinopithecus_bieti
ENSPKIG00000003985	SNRPD1	100	97.479	ENSRROG00000027640	SNRPD1	100	97.479	Rhinopithecus_roxellana
ENSPKIG00000003985	SNRPD1	100	97.479	ENSSBOG00000020998	SNRPD1	100	97.479	Saimiri_boliviensis_boliviensis
ENSPKIG00000003985	SNRPD1	100	97.479	ENSSHAG00000011791	SNRPD1	100	97.479	Sarcophilus_harrisii
ENSPKIG00000003985	SNRPD1	100	97.479	ENSSFOG00015022253	-	100	97.479	Scleropages_formosus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSSFOG00015008809	-	100	97.479	Scleropages_formosus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSSMAG00000008765	snrpd1	100	97.479	Scophthalmus_maximus
ENSPKIG00000003985	SNRPD1	97	96.552	ENSSDUG00000010521	snrpd1	98	96.552	Seriola_dumerili
ENSPKIG00000003985	SNRPD1	100	98.319	ENSSLDG00000011858	snrpd1	100	98.319	Seriola_lalandi_dorsalis
ENSPKIG00000003985	SNRPD1	56	98.507	ENSSARG00000004271	SNRPD1	100	98.507	Sorex_araneus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSSPUG00000002824	SNRPD1	100	97.479	Sphenodon_punctatus
ENSPKIG00000003985	SNRPD1	94	98.214	ENSSPAG00000015229	snrpd1	100	98.214	Stegastes_partitus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSSSCG00000003701	SNRPD1	100	97.479	Sus_scrofa
ENSPKIG00000003985	SNRPD1	97	97.391	ENSTGUG00000005095	SNRPD1	97	97.391	Taeniopygia_guttata
ENSPKIG00000003985	SNRPD1	94	96.429	ENSTRUG00000008977	snrpd1	100	96.429	Takifugu_rubripes
ENSPKIG00000003985	SNRPD1	81	93.750	ENSTNIG00000001224	snrpd1	92	93.750	Tetraodon_nigroviridis
ENSPKIG00000003985	SNRPD1	74	96.591	ENSTBEG00000013776	SNRPD1	100	96.591	Tupaia_belangeri
ENSPKIG00000003985	SNRPD1	97	97.391	ENSTTRG00000002654	SNRPD1	100	97.391	Tursiops_truncatus
ENSPKIG00000003985	SNRPD1	96	97.368	ENSUAMG00000013431	SNRPD1	97	97.368	Ursus_americanus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSUMAG00000019740	SNRPD1	100	97.479	Ursus_maritimus
ENSPKIG00000003985	SNRPD1	100	97.479	ENSVPAG00000010056	SNRPD1	80	97.479	Vicugna_pacos
ENSPKIG00000003985	SNRPD1	94	97.321	ENSVVUG00000004009	SNRPD1	100	97.321	Vulpes_vulpes
ENSPKIG00000003985	SNRPD1	94	95.536	ENSXETG00000027354	snrpd1	94	95.536	Xenopus_tropicalis
ENSPKIG00000003985	SNRPD1	100	98.319	ENSXCOG00000020108	snrpd1	100	98.319	Xiphophorus_couchianus
ENSPKIG00000003985	SNRPD1	100	98.319	ENSXMAG00000003368	snrpd1	100	98.319	Xiphophorus_maculatus