EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000004263 (Gene tree)
Gene ID: 111846466
Gene Symbol: GFI1
Alias: -
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 8162 bases
Position: chrPGUA01000158.1:760588-768749
Accession: 111846466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000018954	zf-C2H2	PF00096.26	7.5e-27	1	6
ENSPKIP00000018954	zf-C2H2	PF00096.26	7.5e-27	2	6
ENSPKIP00000018954	zf-C2H2	PF00096.26	7.5e-27	3	6
ENSPKIP00000018954	zf-C2H2	PF00096.26	7.5e-27	4	6
ENSPKIP00000018954	zf-C2H2	PF00096.26	7.5e-27	5	6
ENSPKIP00000018954	zf-C2H2	PF00096.26	7.5e-27	6	6
ENSPKIP00000018966	zf-C2H2	PF00096.26	7.5e-27	1	6
ENSPKIP00000018966	zf-C2H2	PF00096.26	7.5e-27	2	6
ENSPKIP00000018966	zf-C2H2	PF00096.26	7.5e-27	3	6
ENSPKIP00000018966	zf-C2H2	PF00096.26	7.5e-27	4	6
ENSPKIP00000018966	zf-C2H2	PF00096.26	7.5e-27	5	6
ENSPKIP00000018966	zf-C2H2	PF00096.26	7.5e-27	6	6
ENSPKIP00000018954	zf-met	PF12874.7	1.8e-07	1	1
ENSPKIP00000018966	zf-met	PF12874.7	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000035797	GFI1-201	3938	-	ENSPKIP00000018954	400 (aa)	XP_023672426	UPI000CD661F8
ENSPKIT00000035808	GFI1-202	3833	-	ENSPKIP00000018966	400 (aa)	XP_023672426	UPI000CD661F8

Gene Model

Click here to download ENSPKIG00000004263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000004263's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000004263	GFI1	58	34.711	ENSPKIG00000007872	SNAI3	55	34.711
ENSPKIG00000004263	GFI1	50	43.373	ENSPKIG00000006563	-	98	43.373
ENSPKIG00000004263	GFI1	100	49.010	ENSPKIG00000007643	gfi1b	100	49.010
ENSPKIG00000004263	GFI1	58	43.636	ENSPKIG00000018168	znf236	63	43.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000004263	GFI1	100	64.055	ENSG00000162676	GFI1	100	64.516	Homo_sapiens
ENSPKIG00000004263	GFI1	100	72.319	ENSAPOG00000015189	gfi1ab	100	72.319	Acanthochromis_polyacanthus
ENSPKIG00000004263	GFI1	100	70.149	ENSACIG00000016354	gfi1ab	100	70.149	Amphilophus_citrinellus
ENSPKIG00000004263	GFI1	100	48.951	ENSAOCG00000008339	gfi1ab	100	50.847	Amphiprion_ocellaris
ENSPKIG00000004263	GFI1	100	72.818	ENSAPEG00000023870	gfi1ab	100	72.818	Amphiprion_percula
ENSPKIG00000004263	GFI1	100	66.500	ENSATEG00000009167	gfi1ab	89	66.500	Anabas_testudineus
ENSPKIG00000004263	GFI1	86	70.056	ENSAPLG00000015700	GFI1	100	70.056	Anas_platyrhynchos
ENSPKIG00000004263	GFI1	100	67.470	ENSACAG00000004498	GFI1	100	68.193	Anolis_carolinensis
ENSPKIG00000004263	GFI1	100	64.286	ENSANAG00000019656	GFI1	100	64.286	Aotus_nancymaae
ENSPKIG00000004263	GFI1	100	71.891	ENSACLG00000026458	gfi1ab	93	71.891	Astatotilapia_calliptera
ENSPKIG00000004263	GFI1	100	55.000	ENSAMXG00000006669	GFI1	100	55.000	Astyanax_mexicanus
ENSPKIG00000004263	GFI1	100	67.574	ENSAMXG00000039600	gfi1ab	100	67.574	Astyanax_mexicanus
ENSPKIG00000004263	GFI1	51	58.128	ENSAMXG00000015228	-	64	58.128	Astyanax_mexicanus
ENSPKIG00000004263	GFI1	100	64.155	ENSBTAG00000016723	GFI1	100	65.972	Bos_taurus
ENSPKIG00000004263	GFI1	100	64.286	ENSCJAG00000017609	GFI1	100	65.207	Callithrix_jacchus
ENSPKIG00000004263	GFI1	100	64.747	ENSCAFG00000020155	GFI1	100	65.899	Canis_familiaris
ENSPKIG00000004263	GFI1	100	64.747	ENSCAFG00020013371	GFI1	88	65.899	Canis_lupus_dingo
ENSPKIG00000004263	GFI1	100	63.699	ENSCHIG00000016135	GFI1	100	65.046	Capra_hircus
ENSPKIG00000004263	GFI1	100	63.470	ENSCPOG00000011727	GFI1	100	65.509	Cavia_porcellus
ENSPKIG00000004263	GFI1	100	63.594	ENSCCAG00000036072	GFI1	100	64.286	Cebus_capucinus
ENSPKIG00000004263	GFI1	100	64.055	ENSCATG00000037873	GFI1	100	64.516	Cercocebus_atys
ENSPKIG00000004263	GFI1	100	67.813	ENSCLAG00000005915	GFI1	100	62.697	Chinchilla_lanigera
ENSPKIG00000004263	GFI1	98	58.777	ENSCSAG00000001469	GFI1	100	59.309	Chlorocebus_sabaeus
ENSPKIG00000004263	GFI1	100	64.055	ENSCANG00000034077	GFI1	100	64.516	Colobus_angolensis_palliatus
ENSPKIG00000004263	GFI1	100	63.364	ENSCGRG00001015432	Gfi1	100	63.594	Cricetulus_griseus_chok1gshd
ENSPKIG00000004263	GFI1	100	65.517	ENSCSEG00000017729	GFI1	100	65.764	Cynoglossus_semilaevis
ENSPKIG00000004263	GFI1	100	59.427	ENSCVAG00000004930	GFI1	100	62.201	Cyprinodon_variegatus
ENSPKIG00000004263	GFI1	100	69.059	ENSCVAG00000011828	gfi1ab	100	69.059	Cyprinodon_variegatus
ENSPKIG00000004263	GFI1	100	76.500	ENSDARG00000044457	gfi1ab	100	76.750	Danio_rerio
ENSPKIG00000004263	GFI1	100	63.448	ENSDNOG00000000782	GFI1	97	65.287	Dasypus_novemcinctus
ENSPKIG00000004263	GFI1	100	63.721	ENSEASG00005015509	GFI1	86	65.349	Equus_asinus_asinus
ENSPKIG00000004263	GFI1	92	55.416	ENSECAG00000006647	GFI1	92	57.179	Equus_caballus
ENSPKIG00000004263	GFI1	100	62.763	ENSEEUG00000000198	GFI1	100	63.466	Erinaceus_europaeus
ENSPKIG00000004263	GFI1	100	76.601	ENSELUG00000003015	gfi1ab	99	76.601	Esox_lucius
ENSPKIG00000004263	GFI1	100	67.574	ENSELUG00000019033	GFI1	100	67.822	Esox_lucius
ENSPKIG00000004263	GFI1	100	63.364	ENSFCAG00000005914	GFI1	100	65.207	Felis_catus
ENSPKIG00000004263	GFI1	100	70.223	ENSFHEG00000010997	gfi1ab	100	70.223	Fundulus_heteroclitus
ENSPKIG00000004263	GFI1	100	59.620	ENSFHEG00000000341	GFI1	100	63.747	Fundulus_heteroclitus
ENSPKIG00000004263	GFI1	100	69.652	ENSGMOG00000007737	gfi1ab	100	69.652	Gadus_morhua
ENSPKIG00000004263	GFI1	100	68.613	ENSGALG00000043650	GFI1	100	69.100	Gallus_gallus
ENSPKIG00000004263	GFI1	100	59.242	ENSGAFG00000018063	GFI1	100	63.070	Gambusia_affinis
ENSPKIG00000004263	GFI1	100	70.617	ENSGAFG00000016637	gfi1ab	100	70.617	Gambusia_affinis
ENSPKIG00000004263	GFI1	100	72.070	ENSGACG00000004257	gfi1ab	97	72.319	Gasterosteus_aculeatus
ENSPKIG00000004263	GFI1	100	64.055	ENSGGOG00000005320	GFI1	100	64.516	Gorilla_gorilla
ENSPKIG00000004263	GFI1	100	70.574	ENSHBUG00000011969	gfi1ab	100	70.574	Haplochromis_burtoni
ENSPKIG00000004263	GFI1	100	64.120	ENSHGLG00000008020	GFI1	100	65.509	Heterocephalus_glaber_female
ENSPKIG00000004263	GFI1	100	64.120	ENSHGLG00100000610	GFI1	100	65.509	Heterocephalus_glaber_male
ENSPKIG00000004263	GFI1	100	59.951	ENSHCOG00000019555	GFI1	100	63.918	Hippocampus_comes
ENSPKIG00000004263	GFI1	100	59.016	ENSHCOG00000008590	gfi1ab	100	59.016	Hippocampus_comes
ENSPKIG00000004263	GFI1	100	70.398	ENSIPUG00000010071	gfi1ab	87	70.647	Ictalurus_punctatus
ENSPKIG00000004263	GFI1	100	65.281	ENSIPUG00000013414	GFI1	100	65.281	Ictalurus_punctatus
ENSPKIG00000004263	GFI1	100	64.747	ENSSTOG00000014583	GFI1	100	65.899	Ictidomys_tridecemlineatus
ENSPKIG00000004263	GFI1	100	69.077	ENSKMAG00000003810	gfi1ab	100	69.077	Kryptolebias_marmoratus
ENSPKIG00000004263	GFI1	100	71.571	ENSLBEG00000027776	gfi1ab	100	71.571	Labrus_bergylta
ENSPKIG00000004263	GFI1	100	74.074	ENSLACG00000013362	GFI1	98	74.321	Latimeria_chalumnae
ENSPKIG00000004263	GFI1	99	46.500	ENSLACG00000017590	-	99	46.500	Latimeria_chalumnae
ENSPKIG00000004263	GFI1	100	81.047	ENSLOCG00000004711	gfi1ab	100	81.297	Lepisosteus_oculatus
ENSPKIG00000004263	GFI1	100	64.471	ENSLAFG00000018346	GFI1	100	64.941	Loxodonta_africana
ENSPKIG00000004263	GFI1	100	64.055	ENSMFAG00000045801	GFI1	100	64.516	Macaca_fascicularis
ENSPKIG00000004263	GFI1	100	64.055	ENSMNEG00000036338	GFI1	100	64.516	Macaca_nemestrina
ENSPKIG00000004263	GFI1	100	64.055	ENSMLEG00000036181	GFI1	100	64.516	Mandrillus_leucophaeus
ENSPKIG00000004263	GFI1	100	73.881	ENSMAMG00000008125	gfi1ab	100	73.881	Mastacembelus_armatus
ENSPKIG00000004263	GFI1	100	72.139	ENSMZEG00005009895	gfi1ab	100	72.139	Maylandia_zebra
ENSPKIG00000004263	GFI1	86	69.972	ENSMGAG00000008187	GFI1	100	70.538	Meleagris_gallopavo
ENSPKIG00000004263	GFI1	100	64.286	ENSMICG00000047208	GFI1	100	65.207	Microcebus_murinus
ENSPKIG00000004263	GFI1	100	66.334	ENSMMOG00000005556	gfi1ab	100	66.334	Mola_mola
ENSPKIG00000004263	GFI1	100	65.509	ENSMODG00000011802	GFI1	100	65.741	Monodelphis_domestica
ENSPKIG00000004263	GFI1	100	69.576	ENSMALG00000014672	gfi1ab	100	69.576	Monopterus_albus
ENSPKIG00000004263	GFI1	100	64.516	MGP_CAROLIEiJ_G0027508	Gfi1	100	99.259	Mus_caroli
ENSPKIG00000004263	GFI1	100	64.747	ENSMUSG00000029275	Gfi1	100	65.207	Mus_musculus
ENSPKIG00000004263	GFI1	100	64.747	MGP_PahariEiJ_G0017280	Gfi1	100	99.259	Mus_pahari
ENSPKIG00000004263	GFI1	100	64.977	MGP_SPRETEiJ_G0028507	Gfi1	100	65.438	Mus_spretus
ENSPKIG00000004263	GFI1	100	66.667	ENSMPUG00000004178	GFI1	97	67.407	Mustela_putorius_furo
ENSPKIG00000004263	GFI1	100	62.844	ENSMLUG00000015191	GFI1	97	63.721	Myotis_lucifugus
ENSPKIG00000004263	GFI1	100	71.852	ENSNBRG00000015774	gfi1ab	100	71.852	Neolamprologus_brichardi
ENSPKIG00000004263	GFI1	86	66.400	ENSNLEG00000010470	GFI1	92	67.467	Nomascus_leucogenys
ENSPKIG00000004263	GFI1	100	64.286	ENSOPRG00000001473	GFI1	100	63.825	Ochotona_princeps
ENSPKIG00000004263	GFI1	100	71.642	ENSONIG00000019246	gfi1ab	100	71.642	Oreochromis_niloticus
ENSPKIG00000004263	GFI1	98	56.614	ENSOCUG00000023553	GFI1	93	58.466	Oryctolagus_cuniculus
ENSPKIG00000004263	GFI1	100	63.210	ENSORLG00000005060	GFI1	100	63.210	Oryzias_latipes
ENSPKIG00000004263	GFI1	100	69.500	ENSORLG00000013806	gfi1ab	100	69.500	Oryzias_latipes
ENSPKIG00000004263	GFI1	100	69.500	ENSORLG00020001602	gfi1ab	100	69.500	Oryzias_latipes_hni
ENSPKIG00000004263	GFI1	79	78.378	ENSORLG00020002817	GFI1	96	78.378	Oryzias_latipes_hni
ENSPKIG00000004263	GFI1	100	62.745	ENSORLG00015006070	GFI1	100	62.745	Oryzias_latipes_hsok
ENSPKIG00000004263	GFI1	100	63.570	ENSOMEG00000016722	GFI1	100	65.174	Oryzias_melastigma
ENSPKIG00000004263	GFI1	100	64.428	ENSOGAG00000027913	GFI1	100	66.169	Otolemur_garnettii
ENSPKIG00000004263	GFI1	74	97.143	ENSOARG00000016329	GFI1	94	69.466	Ovis_aries
ENSPKIG00000004263	GFI1	100	66.418	ENSPPAG00000042186	GFI1	100	66.418	Pan_paniscus
ENSPKIG00000004263	GFI1	100	63.364	ENSPPRG00000007521	GFI1	100	65.207	Panthera_pardus
ENSPKIG00000004263	GFI1	100	64.055	ENSPTRG00000043053	GFI1	100	64.516	Pan_troglodytes
ENSPKIG00000004263	GFI1	100	64.055	ENSPANG00000016433	GFI1	100	64.516	Papio_anubis
ENSPKIG00000004263	GFI1	86	71.105	ENSPSIG00000008734	GFI1	97	71.671	Pelodiscus_sinensis
ENSPKIG00000004263	GFI1	77	66.792	ENSPMGG00000011041	GFI1	86	66.792	Periophthalmus_magnuspinnatus
ENSPKIG00000004263	GFI1	100	67.742	ENSPMGG00000012546	gfi1ab	100	68.238	Periophthalmus_magnuspinnatus
ENSPKIG00000004263	GFI1	100	66.434	ENSPCIG00000013728	GFI1	100	67.366	Phascolarctos_cinereus
ENSPKIG00000004263	GFI1	100	70.370	ENSPFOG00000023214	gfi1ab	100	70.370	Poecilia_formosa
ENSPKIG00000004263	GFI1	100	70.370	ENSPLAG00000010879	gfi1ab	100	70.370	Poecilia_latipinna
ENSPKIG00000004263	GFI1	100	64.320	ENSPLAG00000005376	GFI1	91	64.563	Poecilia_latipinna
ENSPKIG00000004263	GFI1	100	64.216	ENSPMEG00000019299	GFI1	100	64.951	Poecilia_mexicana
ENSPKIG00000004263	GFI1	100	70.370	ENSPMEG00000013694	gfi1ab	100	70.370	Poecilia_mexicana
ENSPKIG00000004263	GFI1	100	56.573	ENSPREG00000007997	GFI1	100	56.808	Poecilia_reticulata
ENSPKIG00000004263	GFI1	100	70.720	ENSPREG00000014097	gfi1ab	100	70.720	Poecilia_reticulata
ENSPKIG00000004263	GFI1	100	52.860	ENSPCAG00000011020	GFI1	100	52.860	Procavia_capensis
ENSPKIG00000004263	GFI1	100	64.055	ENSPCOG00000020540	GFI1	100	64.977	Propithecus_coquereli
ENSPKIG00000004263	GFI1	100	63.218	ENSPVAG00000006928	GFI1	100	65.501	Pteropus_vampyrus
ENSPKIG00000004263	GFI1	100	71.891	ENSPNYG00000021183	gfi1ab	100	71.891	Pundamilia_nyererei
ENSPKIG00000004263	GFI1	100	69.077	ENSPNAG00000027258	gfi1ab	100	69.077	Pygocentrus_nattereri
ENSPKIG00000004263	GFI1	100	61.557	ENSPNAG00000028014	GFI1	100	61.557	Pygocentrus_nattereri
ENSPKIG00000004263	GFI1	100	63.825	ENSRNOG00000002042	Gfi1	100	65.438	Rattus_norvegicus
ENSPKIG00000004263	GFI1	100	64.286	ENSRBIG00000036467	GFI1	100	64.516	Rhinopithecus_bieti
ENSPKIG00000004263	GFI1	100	64.286	ENSRROG00000031687	GFI1	100	64.516	Rhinopithecus_roxellana
ENSPKIG00000004263	GFI1	100	64.286	ENSSBOG00000031300	GFI1	100	64.516	Saimiri_boliviensis_boliviensis
ENSPKIG00000004263	GFI1	100	84.750	ENSSFOG00015020295	gfi1	100	84.750	Scleropages_formosus
ENSPKIG00000004263	GFI1	100	69.727	ENSSMAG00000002782	gfi1ab	100	69.727	Scophthalmus_maximus
ENSPKIG00000004263	GFI1	100	69.327	ENSSDUG00000022410	gfi1ab	100	69.327	Seriola_dumerili
ENSPKIG00000004263	GFI1	100	69.327	ENSSLDG00000020163	gfi1ab	100	69.327	Seriola_lalandi_dorsalis
ENSPKIG00000004263	GFI1	81	93.750	ENSSPAG00000009140	gfi1ab	100	93.750	Stegastes_partitus
ENSPKIG00000004263	GFI1	100	64.953	ENSSSCG00000006902	GFI1	100	65.888	Sus_scrofa
ENSPKIG00000004263	GFI1	86	68.946	ENSTGUG00000006060	GFI1	100	69.516	Taeniopygia_guttata
ENSPKIG00000004263	GFI1	100	69.307	ENSTRUG00000000415	gfi1ab	100	69.307	Takifugu_rubripes
ENSPKIG00000004263	GFI1	100	65.586	ENSTNIG00000000651	gfi1ab	97	65.848	Tetraodon_nigroviridis
ENSPKIG00000004263	GFI1	100	64.419	ENSTTRG00000000082	GFI1	100	65.349	Tursiops_truncatus
ENSPKIG00000004263	GFI1	100	65.566	ENSUAMG00000021124	GFI1	91	66.507	Ursus_americanus
ENSPKIG00000004263	GFI1	100	66.585	ENSXETG00000023006	gfi1	98	67.076	Xenopus_tropicalis
ENSPKIG00000004263	GFI1	100	70.968	ENSXMAG00000010523	gfi1ab	100	70.968	Xiphophorus_maculatus
ENSPKIG00000004263	GFI1	86	53.463	ENSXMAG00000009274	GFI1	70	58.028	Xiphophorus_maculatus