EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000004267 (Gene tree)
Gene ID: 111857753
Gene Symbol: rif1
Alias: -
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 20886 bases
Position: chrPGUA01000001.1:2847531-2868416
Accession: 111857753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000018877	Rif1_N	PF12231.8	3.3e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000035715	-	7096	XM_023838933	ENSPKIP00000018877	2285 (aa)	XP_023694701	UPI000CD63CE2

Gene Model

Click here to download ENSPKIG00000004267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000004267's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000004267	rif1	68	51.990	ENSG00000080345	RIF1	96	57.335	Homo_sapiens
ENSPKIG00000004267	rif1	76	60.286	ENSAPOG00000011073	rif1	74	55.487	Acanthochromis_polyacanthus
ENSPKIG00000004267	rif1	67	52.695	ENSAMEG00000008461	RIF1	63	52.516	Ailuropoda_melanoleuca
ENSPKIG00000004267	rif1	72	64.740	ENSACIG00000017765	rif1	89	64.740	Amphilophus_citrinellus
ENSPKIG00000004267	rif1	76	60.282	ENSAOCG00000017231	rif1	76	60.282	Amphiprion_ocellaris
ENSPKIG00000004267	rif1	84	55.702	ENSATEG00000022887	rif1	80	55.519	Anabas_testudineus
ENSPKIG00000004267	rif1	54	50.199	ENSACAG00000003714	RIF1	52	50.161	Anolis_carolinensis
ENSPKIG00000004267	rif1	68	51.840	ENSANAG00000024840	RIF1	63	51.655	Aotus_nancymaae
ENSPKIG00000004267	rif1	99	51.985	ENSAMXG00000010910	rif1	99	51.985	Astyanax_mexicanus
ENSPKIG00000004267	rif1	63	52.920	ENSBTAG00000021020	RIF1	70	51.360	Bos_taurus
ENSPKIG00000004267	rif1	69	51.801	ENSCJAG00000003138	RIF1	64	51.618	Callithrix_jacchus
ENSPKIG00000004267	rif1	72	51.371	ENSCAFG00000005670	RIF1	60	51.261	Canis_familiaris
ENSPKIG00000004267	rif1	67	51.371	ENSCAFG00020016401	RIF1	63	51.261	Canis_lupus_dingo
ENSPKIG00000004267	rif1	70	52.720	ENSCHIG00000020327	RIF1	71	51.057	Capra_hircus
ENSPKIG00000004267	rif1	67	52.266	ENSTSYG00000008861	RIF1	73	52.266	Carlito_syrichta
ENSPKIG00000004267	rif1	57	44.713	ENSCAPG00000008957	RIF1	81	44.713	Cavia_aperea
ENSPKIG00000004267	rif1	66	50.453	ENSCPOG00000037898	RIF1	77	49.547	Cavia_porcellus
ENSPKIG00000004267	rif1	68	52.048	ENSCATG00000033353	RIF1	63	52.026	Cercocebus_atys
ENSPKIG00000004267	rif1	63	53.934	ENSCLAG00000001517	RIF1	69	49.547	Chinchilla_lanigera
ENSPKIG00000004267	rif1	68	52.048	ENSCSAG00000016089	RIF1	63	52.026	Chlorocebus_sabaeus
ENSPKIG00000004267	rif1	64	54.867	ENSCHOG00000007187	RIF1	59	53.953	Choloepus_hoffmanni
ENSPKIG00000004267	rif1	68	55.331	ENSCPBG00000025885	RIF1	81	54.925	Chrysemys_picta_bellii
ENSPKIG00000004267	rif1	64	58.000	ENSCANG00000028962	RIF1	62	58.000	Colobus_angolensis_palliatus
ENSPKIG00000004267	rif1	67	50.200	ENSCGRG00001024589	Rif1	64	50.282	Cricetulus_griseus_chok1gshd
ENSPKIG00000004267	rif1	66	51.473	ENSCGRG00000010713	Rif1	63	51.944	Cricetulus_griseus_crigri
ENSPKIG00000004267	rif1	93	62.404	ENSDARG00000062650	rif1	91	62.404	Danio_rerio
ENSPKIG00000004267	rif1	67	52.134	ENSDNOG00000011194	RIF1	60	52.134	Dasypus_novemcinctus
ENSPKIG00000004267	rif1	68	48.632	ENSETEG00000012421	RIF1	63	48.632	Echinops_telfairi
ENSPKIG00000004267	rif1	63	70.684	ENSEASG00005023434	RIF1	65	70.684	Equus_asinus_asinus
ENSPKIG00000004267	rif1	66	58.872	ENSECAG00000012679	RIF1	69	58.659	Equus_caballus
ENSPKIG00000004267	rif1	77	67.697	ENSELUG00000006826	rif1	66	68.466	Esox_lucius
ENSPKIG00000004267	rif1	72	52.653	ENSFCAG00000029742	RIF1	74	47.619	Felis_catus
ENSPKIG00000004267	rif1	63	53.338	ENSFHEG00000013721	rif1	74	60.340	Fundulus_heteroclitus
ENSPKIG00000004267	rif1	65	62.222	ENSGMOG00000003517	rif1	96	62.222	Gadus_morhua
ENSPKIG00000004267	rif1	89	56.764	ENSGAFG00000017196	rif1	92	58.640	Gambusia_affinis
ENSPKIG00000004267	rif1	62	54.290	ENSGACG00000008579	rif1	63	54.589	Gasterosteus_aculeatus
ENSPKIG00000004267	rif1	90	50.530	ENSGAGG00000012595	RIF1	78	54.925	Gopherus_agassizii
ENSPKIG00000004267	rif1	56	60.489	ENSGGOG00000040178	RIF1	56	60.292	Gorilla_gorilla
ENSPKIG00000004267	rif1	66	55.185	ENSHBUG00000007125	rif1	65	56.040	Haplochromis_burtoni
ENSPKIG00000004267	rif1	79	55.620	ENSHCOG00000015943	rif1	69	55.620	Hippocampus_comes
ENSPKIG00000004267	rif1	77	70.206	ENSIPUG00000021703	rif1	90	70.206	Ictalurus_punctatus
ENSPKIG00000004267	rif1	67	52.577	ENSSTOG00000020712	RIF1	73	51.360	Ictidomys_tridecemlineatus
ENSPKIG00000004267	rif1	67	51.662	ENSJJAG00000023000	Rif1	64	51.662	Jaculus_jaculus
ENSPKIG00000004267	rif1	78	58.113	ENSLBEG00000023196	rif1	85	56.242	Labrus_bergylta
ENSPKIG00000004267	rif1	71	55.646	ENSLACG00000005425	RIF1	77	53.614	Latimeria_chalumnae
ENSPKIG00000004267	rif1	94	56.472	ENSLOCG00000002657	rif1	99	56.592	Lepisosteus_oculatus
ENSPKIG00000004267	rif1	68	51.878	ENSMFAG00000032233	RIF1	63	51.855	Macaca_fascicularis
ENSPKIG00000004267	rif1	68	51.878	ENSMMUG00000008611	RIF1	63	51.855	Macaca_mulatta
ENSPKIG00000004267	rif1	68	51.885	ENSMNEG00000031616	RIF1	63	51.861	Macaca_nemestrina
ENSPKIG00000004267	rif1	68	52.048	ENSMLEG00000042945	RIF1	63	52.026	Mandrillus_leucophaeus
ENSPKIG00000004267	rif1	63	60.121	ENSMAMG00000001745	rif1	81	65.257	Mastacembelus_armatus
ENSPKIG00000004267	rif1	79	57.950	ENSMZEG00005020920	rif1	94	63.506	Maylandia_zebra
ENSPKIG00000004267	rif1	57	51.787	ENSMGAG00000012732	RIF1	79	42.708	Meleagris_gallopavo
ENSPKIG00000004267	rif1	67	52.446	ENSMICG00000046127	RIF1	62	52.423	Microcebus_murinus
ENSPKIG00000004267	rif1	68	50.481	ENSMOCG00000009381	Rif1	64	50.364	Microtus_ochrogaster
ENSPKIG00000004267	rif1	78	60.117	ENSMMOG00000006519	rif1	73	60.117	Mola_mola
ENSPKIG00000004267	rif1	72	43.993	ENSMODG00000003703	RIF1	66	44.069	Monodelphis_domestica
ENSPKIG00000004267	rif1	77	63.609	ENSMALG00000016759	rif1	90	63.609	Monopterus_albus
ENSPKIG00000004267	rif1	70	51.787	MGP_CAROLIEiJ_G0023555	Rif1	71	50.476	Mus_caroli
ENSPKIG00000004267	rif1	71	51.849	ENSMUSG00000036202	Rif1	71	48.788	Mus_musculus
ENSPKIG00000004267	rif1	67	50.476	MGP_PahariEiJ_G0025006	Rif1	71	50.476	Mus_pahari
ENSPKIG00000004267	rif1	71	52.174	MGP_SPRETEiJ_G0024476	Rif1	64	52.313	Mus_spretus
ENSPKIG00000004267	rif1	68	52.410	ENSMPUG00000000371	RIF1	71	52.410	Mustela_putorius_furo
ENSPKIG00000004267	rif1	56	49.195	ENSMLUG00000003376	RIF1	59	49.195	Myotis_lucifugus
ENSPKIG00000004267	rif1	53	51.914	ENSNGAG00000009268	Rif1	99	40.657	Nannospalax_galili
ENSPKIG00000004267	rif1	84	55.037	ENSNBRG00000014257	rif1	81	55.037	Neolamprologus_brichardi
ENSPKIG00000004267	rif1	52	63.111	ENSMEUG00000007601	-	57	63.111	Notamacropus_eugenii
ENSPKIG00000004267	rif1	68	54.099	ENSONIG00000013657	rif1	74	53.884	Oreochromis_niloticus
ENSPKIG00000004267	rif1	58	58.168	ENSOANG00000006078	-	55	58.168	Ornithorhynchus_anatinus
ENSPKIG00000004267	rif1	68	52.941	ENSOCUG00000017435	RIF1	74	50.445	Oryctolagus_cuniculus
ENSPKIG00000004267	rif1	82	52.416	ENSORLG00020001302	rif1	77	57.423	Oryzias_latipes_hni
ENSPKIG00000004267	rif1	63	54.720	ENSORLG00015000009	rif1	61	54.696	Oryzias_latipes_hsok
ENSPKIG00000004267	rif1	70	52.644	ENSOARG00000008930	RIF1	62	52.760	Ovis_aries
ENSPKIG00000004267	rif1	68	52.077	ENSPPAG00000023754	RIF1	63	52.135	Pan_paniscus
ENSPKIG00000004267	rif1	72	52.251	ENSPPRG00000003618	RIF1	74	47.553	Panthera_pardus
ENSPKIG00000004267	rif1	72	52.170	ENSPTIG00000020652	RIF1	74	47.484	Panthera_tigris_altaica
ENSPKIG00000004267	rif1	68	51.997	ENSPTRG00000012534	RIF1	63	52.055	Pan_troglodytes
ENSPKIG00000004267	rif1	68	52.129	ENSPANG00000008525	RIF1	63	52.026	Papio_anubis
ENSPKIG00000004267	rif1	78	60.317	ENSPMGG00000016141	rif1	97	60.317	Periophthalmus_magnuspinnatus
ENSPKIG00000004267	rif1	67	51.843	ENSPEMG00000000446	Rif1	76	48.563	Peromyscus_maniculatus_bairdii
ENSPKIG00000004267	rif1	73	50.904	ENSPCIG00000009185	RIF1	78	50.904	Phascolarctos_cinereus
ENSPKIG00000004267	rif1	65	55.548	ENSPFOG00000017804	rif1	63	55.423	Poecilia_formosa
ENSPKIG00000004267	rif1	58	54.265	ENSPFOG00000000554	-	61	54.265	Poecilia_formosa
ENSPKIG00000004267	rif1	88	61.078	ENSPLAG00000017945	rif1	78	53.571	Poecilia_latipinna
ENSPKIG00000004267	rif1	55	52.049	ENSPMEG00000006897	-	59	52.049	Poecilia_mexicana
ENSPKIG00000004267	rif1	65	73.034	ENSPREG00000018052	rif1	69	60.352	Poecilia_reticulata
ENSPKIG00000004267	rif1	68	51.834	ENSPPYG00000012846	RIF1	63	51.813	Pongo_abelii
ENSPKIG00000004267	rif1	69	52.122	ENSPCOG00000027888	RIF1	62	52.016	Propithecus_coquereli
ENSPKIG00000004267	rif1	59	61.089	ENSPVAG00000014276	RIF1	65	61.031	Pteropus_vampyrus
ENSPKIG00000004267	rif1	90	54.065	ENSPNYG00000012940	rif1	94	62.931	Pundamilia_nyererei
ENSPKIG00000004267	rif1	93	66.412	ENSPNAG00000016685	rif1	91	66.412	Pygocentrus_nattereri
ENSPKIG00000004267	rif1	66	50.641	ENSRNOG00000054901	Rif1	70	50.641	Rattus_norvegicus
ENSPKIG00000004267	rif1	68	51.888	ENSRBIG00000003704	RIF1	63	51.702	Rhinopithecus_bieti
ENSPKIG00000004267	rif1	68	52.331	ENSRROG00000028206	RIF1	63	52.311	Rhinopithecus_roxellana
ENSPKIG00000004267	rif1	67	59.524	ENSSBOG00000029530	RIF1	64	57.534	Saimiri_boliviensis_boliviensis
ENSPKIG00000004267	rif1	71	50.835	ENSSHAG00000018552	RIF1	84	44.903	Sarcophilus_harrisii
ENSPKIG00000004267	rif1	99	64.749	ENSSFOG00015021539	rif1	99	65.253	Scleropages_formosus
ENSPKIG00000004267	rif1	69	53.723	ENSSMAG00000011704	rif1	63	53.155	Scophthalmus_maximus
ENSPKIG00000004267	rif1	62	58.580	ENSSDUG00000015632	rif1	99	50.252	Seriola_dumerili
ENSPKIG00000004267	rif1	94	57.891	ENSSLDG00000019531	rif1	88	57.995	Seriola_lalandi_dorsalis
ENSPKIG00000004267	rif1	71	53.776	ENSSPUG00000003062	RIF1	66	54.569	Sphenodon_punctatus
ENSPKIG00000004267	rif1	61	66.735	ENSSPAG00000018359	rif1	88	66.457	Stegastes_partitus
ENSPKIG00000004267	rif1	67	52.771	ENSSSCG00000016395	RIF1	62	52.636	Sus_scrofa
ENSPKIG00000004267	rif1	77	58.873	ENSTRUG00000015808	rif1	98	58.873	Takifugu_rubripes
ENSPKIG00000004267	rif1	60	56.077	ENSTNIG00000011538	rif1	64	53.316	Tetraodon_nigroviridis
ENSPKIG00000004267	rif1	60	56.426	ENSTBEG00000016082	RIF1	55	56.133	Tupaia_belangeri
ENSPKIG00000004267	rif1	72	52.090	ENSTTRG00000011190	RIF1	75	51.360	Tursiops_truncatus
ENSPKIG00000004267	rif1	57	52.410	ENSUAMG00000026385	RIF1	59	52.410	Ursus_americanus
ENSPKIG00000004267	rif1	67	52.410	ENSUMAG00000000337	RIF1	62	52.410	Ursus_maritimus
ENSPKIG00000004267	rif1	72	51.399	ENSVPAG00000002162	RIF1	62	51.208	Vicugna_pacos
ENSPKIG00000004267	rif1	72	51.974	ENSVVUG00000011293	RIF1	63	51.870	Vulpes_vulpes
ENSPKIG00000004267	rif1	53	49.717	ENSXETG00000004530	rif1	62	45.051	Xenopus_tropicalis