EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000004271 (Gene tree)
Gene ID: 111843446
Gene Symbol: exosc2
Alias: -
Full Name: exosome component 2
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 5451 bases
Position: chrPGUA01000125.1:203414-208864
Accession: 111843446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000018883	ECR1_N	PF14382.6	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000035721	-	2318	-	ENSPKIP00000018883	292 (aa)	XP_023666814	UPI000CD600B3

Gene Model

Click here to download ENSPKIG00000004271's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000004271's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000004271	exosc2	98	80.277	ENSG00000130713	EXOSC2	99	80.277	Homo_sapiens
ENSPKIG00000004271	exosc2	91	84.906	ENSAPOG00000008861	exosc2	97	84.906	Acanthochromis_polyacanthus
ENSPKIG00000004271	exosc2	98	80.969	ENSAMEG00000016239	EXOSC2	99	80.969	Ailuropoda_melanoleuca
ENSPKIG00000004271	exosc2	100	84.354	ENSACIG00000019054	exosc2	100	84.354	Amphilophus_citrinellus
ENSPKIG00000004271	exosc2	98	84.083	ENSAOCG00000004983	exosc2	99	84.083	Amphiprion_ocellaris
ENSPKIG00000004271	exosc2	98	84.083	ENSAOCG00000008577	exosc2	99	84.083	Amphiprion_ocellaris
ENSPKIG00000004271	exosc2	98	84.083	ENSAPEG00000014088	exosc2	99	84.083	Amphiprion_percula
ENSPKIG00000004271	exosc2	100	84.694	ENSATEG00000018680	exosc2	100	84.694	Anabas_testudineus
ENSPKIG00000004271	exosc2	93	82.721	ENSAPLG00000012516	EXOSC2	94	82.721	Anas_platyrhynchos
ENSPKIG00000004271	exosc2	100	78.231	ENSACAG00000002706	EXOSC2	100	78.231	Anolis_carolinensis
ENSPKIG00000004271	exosc2	100	84.354	ENSACLG00000013613	exosc2	100	84.354	Astatotilapia_calliptera
ENSPKIG00000004271	exosc2	98	85.567	ENSAMXG00000042605	exosc2	99	85.567	Astyanax_mexicanus
ENSPKIG00000004271	exosc2	98	79.931	ENSBTAG00000048071	EXOSC2	99	79.931	Bos_taurus
ENSPKIG00000004271	exosc2	95	42.446	WBGene00022232	exos-2	92	42.446	Caenorhabditis_elegans
ENSPKIG00000004271	exosc2	98	80.277	ENSCJAG00000020537	EXOSC2	99	80.277	Callithrix_jacchus
ENSPKIG00000004271	exosc2	98	80.488	ENSCAFG00000019941	EXOSC2	98	80.488	Canis_familiaris
ENSPKIG00000004271	exosc2	98	80.277	ENSCAFG00020024047	EXOSC2	99	80.277	Canis_lupus_dingo
ENSPKIG00000004271	exosc2	98	80.277	ENSCHIG00000021398	EXOSC2	99	80.277	Capra_hircus
ENSPKIG00000004271	exosc2	98	79.585	ENSTSYG00000001805	EXOSC2	99	79.585	Carlito_syrichta
ENSPKIG00000004271	exosc2	98	75.685	ENSCPOG00000005902	EXOSC2	99	75.685	Cavia_porcellus
ENSPKIG00000004271	exosc2	98	80.277	ENSCCAG00000019749	EXOSC2	99	80.277	Cebus_capucinus
ENSPKIG00000004271	exosc2	98	79.585	ENSCATG00000025389	-	99	79.585	Cercocebus_atys
ENSPKIG00000004271	exosc2	98	79.585	ENSCLAG00000006195	EXOSC2	99	79.585	Chinchilla_lanigera
ENSPKIG00000004271	exosc2	98	79.585	ENSCSAG00000014760	EXOSC2	99	79.585	Chlorocebus_sabaeus
ENSPKIG00000004271	exosc2	98	78.547	ENSCHOG00000000858	EXOSC2	99	78.547	Choloepus_hoffmanni
ENSPKIG00000004271	exosc2	100	78.912	ENSCPBG00000022626	EXOSC2	100	78.912	Chrysemys_picta_bellii
ENSPKIG00000004271	exosc2	96	63.509	ENSCING00000014934	-	94	63.509	Ciona_intestinalis
ENSPKIG00000004271	exosc2	90	65.543	ENSCSAVG00000003684	-	97	65.543	Ciona_savignyi
ENSPKIG00000004271	exosc2	98	79.585	ENSCANG00000039828	-	99	79.585	Colobus_angolensis_palliatus
ENSPKIG00000004271	exosc2	100	72.109	ENSCANG00000029298	-	100	72.109	Colobus_angolensis_palliatus
ENSPKIG00000004271	exosc2	98	78.201	ENSCGRG00001013981	Exosc2	99	78.201	Cricetulus_griseus_chok1gshd
ENSPKIG00000004271	exosc2	98	78.201	ENSCGRG00000017629	Exosc2	99	78.201	Cricetulus_griseus_crigri
ENSPKIG00000004271	exosc2	100	82.877	ENSCSEG00000016539	exosc2	100	82.877	Cynoglossus_semilaevis
ENSPKIG00000004271	exosc2	98	83.391	ENSCVAG00000022260	exosc2	99	83.391	Cyprinodon_variegatus
ENSPKIG00000004271	exosc2	98	81.100	ENSDARG00000028688	exosc2	99	81.100	Danio_rerio
ENSPKIG00000004271	exosc2	89	79.848	ENSDNOG00000025767	-	99	79.848	Dasypus_novemcinctus
ENSPKIG00000004271	exosc2	98	79.585	ENSDORG00000009238	Exosc2	99	79.585	Dipodomys_ordii
ENSPKIG00000004271	exosc2	89	63.359	FBgn0034879	Rrp4	88	63.740	Drosophila_melanogaster
ENSPKIG00000004271	exosc2	93	67.528	ENSETEG00000016130	-	98	67.528	Echinops_telfairi
ENSPKIG00000004271	exosc2	98	79.585	ENSEASG00005008475	EXOSC2	85	79.585	Equus_asinus_asinus
ENSPKIG00000004271	exosc2	98	79.585	ENSECAG00000007897	EXOSC2	85	79.585	Equus_caballus
ENSPKIG00000004271	exosc2	100	86.824	ENSELUG00000013641	exosc2	100	86.824	Esox_lucius
ENSPKIG00000004271	exosc2	98	79.585	ENSFCAG00000025936	EXOSC2	99	79.585	Felis_catus
ENSPKIG00000004271	exosc2	100	75.510	ENSFALG00000001446	EXOSC2	100	75.510	Ficedula_albicollis
ENSPKIG00000004271	exosc2	99	78.082	ENSFDAG00000017196	EXOSC2	99	78.082	Fukomys_damarensis
ENSPKIG00000004271	exosc2	98	84.429	ENSFHEG00000018571	exosc2	99	84.429	Fundulus_heteroclitus
ENSPKIG00000004271	exosc2	98	80.277	ENSGMOG00000011785	exosc2	98	80.277	Gadus_morhua
ENSPKIG00000004271	exosc2	100	80.612	ENSGALG00000040373	EXOSC2	100	80.612	Gallus_gallus
ENSPKIG00000004271	exosc2	98	83.624	ENSGAFG00000010283	exosc2	98	83.624	Gambusia_affinis
ENSPKIG00000004271	exosc2	100	81.293	ENSGACG00000016805	exosc2	99	83.234	Gasterosteus_aculeatus
ENSPKIG00000004271	exosc2	90	80.682	ENSGAGG00000021026	EXOSC2	99	80.682	Gopherus_agassizii
ENSPKIG00000004271	exosc2	98	79.585	ENSGGOG00000010578	EXOSC2	99	79.585	Gorilla_gorilla
ENSPKIG00000004271	exosc2	100	84.354	ENSHBUG00000022437	exosc2	100	84.354	Haplochromis_burtoni
ENSPKIG00000004271	exosc2	98	79.239	ENSHGLG00000012834	EXOSC2	99	79.239	Heterocephalus_glaber_female
ENSPKIG00000004271	exosc2	98	79.239	ENSHGLG00100007092	EXOSC2	99	79.239	Heterocephalus_glaber_male
ENSPKIG00000004271	exosc2	100	82.653	ENSHCOG00000019130	exosc2	100	82.653	Hippocampus_comes
ENSPKIG00000004271	exosc2	98	84.880	ENSIPUG00000015397	exosc2	99	84.880	Ictalurus_punctatus
ENSPKIG00000004271	exosc2	98	79.931	ENSSTOG00000005999	EXOSC2	99	79.931	Ictidomys_tridecemlineatus
ENSPKIG00000004271	exosc2	98	78.893	ENSJJAG00000003188	Exosc2	99	78.893	Jaculus_jaculus
ENSPKIG00000004271	exosc2	98	84.561	ENSKMAG00000017397	exosc2	98	84.561	Kryptolebias_marmoratus
ENSPKIG00000004271	exosc2	100	81.973	ENSLBEG00000019269	exosc2	100	81.973	Labrus_bergylta
ENSPKIG00000004271	exosc2	98	78.966	ENSLACG00000015530	EXOSC2	99	78.966	Latimeria_chalumnae
ENSPKIG00000004271	exosc2	98	79.310	ENSLAFG00000006984	EXOSC2	99	79.310	Loxodonta_africana
ENSPKIG00000004271	exosc2	98	68.858	ENSMFAG00000034160	-	83	68.858	Macaca_fascicularis
ENSPKIG00000004271	exosc2	98	79.585	ENSMFAG00000000597	-	99	79.585	Macaca_fascicularis
ENSPKIG00000004271	exosc2	98	76.471	ENSMMUG00000012498	EXOSC2	99	76.471	Macaca_mulatta
ENSPKIG00000004271	exosc2	98	79.585	ENSMNEG00000031861	-	99	79.585	Macaca_nemestrina
ENSPKIG00000004271	exosc2	98	69.896	ENSMNEG00000028704	-	90	69.896	Macaca_nemestrina
ENSPKIG00000004271	exosc2	98	79.585	ENSMLEG00000042587	-	99	79.585	Mandrillus_leucophaeus
ENSPKIG00000004271	exosc2	98	68.858	ENSMLEG00000029891	-	90	68.858	Mandrillus_leucophaeus
ENSPKIG00000004271	exosc2	100	84.694	ENSMAMG00000012466	exosc2	100	84.694	Mastacembelus_armatus
ENSPKIG00000004271	exosc2	100	84.014	ENSMZEG00005018737	exosc2	100	84.014	Maylandia_zebra
ENSPKIG00000004271	exosc2	100	80.952	ENSMGAG00000005450	EXOSC2	100	80.952	Meleagris_gallopavo
ENSPKIG00000004271	exosc2	98	78.201	ENSMAUG00000008299	Exosc2	99	78.201	Mesocricetus_auratus
ENSPKIG00000004271	exosc2	98	79.931	ENSMICG00000015495	EXOSC2	99	79.931	Microcebus_murinus
ENSPKIG00000004271	exosc2	98	78.547	ENSMOCG00000008262	Exosc2	99	78.547	Microtus_ochrogaster
ENSPKIG00000004271	exosc2	100	83.673	ENSMMOG00000009616	exosc2	100	83.673	Mola_mola
ENSPKIG00000004271	exosc2	98	78.547	ENSMODG00000012114	EXOSC2	99	78.547	Monodelphis_domestica
ENSPKIG00000004271	exosc2	100	84.354	ENSMALG00000022132	exosc2	100	84.354	Monopterus_albus
ENSPKIG00000004271	exosc2	98	77.855	MGP_CAROLIEiJ_G0023415	Exosc2	99	77.855	Mus_caroli
ENSPKIG00000004271	exosc2	98	77.855	ENSMUSG00000039356	Exosc2	99	77.855	Mus_musculus
ENSPKIG00000004271	exosc2	98	77.509	MGP_PahariEiJ_G0024872	Exosc2	99	77.509	Mus_pahari
ENSPKIG00000004271	exosc2	98	77.855	MGP_SPRETEiJ_G0024332	Exosc2	99	77.855	Mus_spretus
ENSPKIG00000004271	exosc2	98	81.315	ENSMPUG00000012686	EXOSC2	99	81.315	Mustela_putorius_furo
ENSPKIG00000004271	exosc2	98	79.381	ENSMLUG00000008776	EXOSC2	99	79.381	Myotis_lucifugus
ENSPKIG00000004271	exosc2	98	79.239	ENSNGAG00000019383	Exosc2	99	79.239	Nannospalax_galili
ENSPKIG00000004271	exosc2	100	83.673	ENSNBRG00000005453	exosc2	100	83.673	Neolamprologus_brichardi
ENSPKIG00000004271	exosc2	98	80.277	ENSNLEG00000012533	EXOSC2	99	80.277	Nomascus_leucogenys
ENSPKIG00000004271	exosc2	98	62.284	ENSMEUG00000000795	EXOSC2	99	62.284	Notamacropus_eugenii
ENSPKIG00000004271	exosc2	54	82.609	ENSOPRG00000008688	EXOSC2	55	82.609	Ochotona_princeps
ENSPKIG00000004271	exosc2	98	77.509	ENSODEG00000016880	-	99	77.509	Octodon_degus
ENSPKIG00000004271	exosc2	87	79.921	ENSODEG00000019513	-	100	79.921	Octodon_degus
ENSPKIG00000004271	exosc2	100	84.014	ENSONIG00000014086	exosc2	100	84.014	Oreochromis_niloticus
ENSPKIG00000004271	exosc2	93	79.336	ENSOANG00000001044	EXOSC2	92	79.336	Ornithorhynchus_anatinus
ENSPKIG00000004271	exosc2	98	79.585	ENSOCUG00000007138	EXOSC2	99	79.585	Oryctolagus_cuniculus
ENSPKIG00000004271	exosc2	98	84.083	ENSORLG00000007443	exosc2	99	84.083	Oryzias_latipes
ENSPKIG00000004271	exosc2	98	83.737	ENSORLG00020018902	exosc2	99	83.737	Oryzias_latipes_hni
ENSPKIG00000004271	exosc2	98	84.083	ENSORLG00015006767	exosc2	99	84.083	Oryzias_latipes_hsok
ENSPKIG00000004271	exosc2	98	83.737	ENSOMEG00000003533	exosc2	99	83.737	Oryzias_melastigma
ENSPKIG00000004271	exosc2	98	79.585	ENSOGAG00000007558	EXOSC2	99	79.585	Otolemur_garnettii
ENSPKIG00000004271	exosc2	98	79.381	ENSOARG00000007438	EXOSC2	99	79.381	Ovis_aries
ENSPKIG00000004271	exosc2	98	80.277	ENSPPAG00000034796	EXOSC2	99	80.277	Pan_paniscus
ENSPKIG00000004271	exosc2	98	79.931	ENSPPRG00000001089	EXOSC2	99	79.931	Panthera_pardus
ENSPKIG00000004271	exosc2	98	79.931	ENSPTIG00000021163	EXOSC2	99	79.931	Panthera_tigris_altaica
ENSPKIG00000004271	exosc2	98	80.277	ENSPTRG00000021476	EXOSC2	99	80.277	Pan_troglodytes
ENSPKIG00000004271	exosc2	98	80.277	ENSPTRG00000045766	-	99	80.277	Pan_troglodytes
ENSPKIG00000004271	exosc2	98	79.585	ENSPANG00000025966	EXOSC2	99	79.585	Papio_anubis
ENSPKIG00000004271	exosc2	100	79.252	ENSPSIG00000006743	EXOSC2	100	79.252	Pelodiscus_sinensis
ENSPKIG00000004271	exosc2	86	86.111	ENSPMGG00000010980	exosc2	99	86.111	Periophthalmus_magnuspinnatus
ENSPKIG00000004271	exosc2	98	78.893	ENSPEMG00000006345	Exosc2	99	78.893	Peromyscus_maniculatus_bairdii
ENSPKIG00000004271	exosc2	92	79.259	ENSPMAG00000001280	exosc2	92	79.259	Petromyzon_marinus
ENSPKIG00000004271	exosc2	98	78.893	ENSPCIG00000024122	EXOSC2	96	78.893	Phascolarctos_cinereus
ENSPKIG00000004271	exosc2	98	84.028	ENSPFOG00000019819	exosc2	98	84.028	Poecilia_formosa
ENSPKIG00000004271	exosc2	98	84.321	ENSPLAG00000004605	exosc2	98	84.321	Poecilia_latipinna
ENSPKIG00000004271	exosc2	98	84.321	ENSPMEG00000010976	exosc2	98	84.321	Poecilia_mexicana
ENSPKIG00000004271	exosc2	98	84.321	ENSPREG00000014306	exosc2	98	84.321	Poecilia_reticulata
ENSPKIG00000004271	exosc2	98	80.623	ENSPPYG00000019695	EXOSC2	99	80.623	Pongo_abelii
ENSPKIG00000004271	exosc2	98	79.585	ENSPCAG00000013400	EXOSC2	99	79.585	Procavia_capensis
ENSPKIG00000004271	exosc2	98	80.277	ENSPCOG00000017639	EXOSC2	99	80.277	Propithecus_coquereli
ENSPKIG00000004271	exosc2	98	78.547	ENSPVAG00000001513	EXOSC2	99	78.547	Pteropus_vampyrus
ENSPKIG00000004271	exosc2	100	84.354	ENSPNYG00000007383	exosc2	100	84.354	Pundamilia_nyererei
ENSPKIG00000004271	exosc2	98	88.621	ENSPNAG00000014281	exosc2	99	88.621	Pygocentrus_nattereri
ENSPKIG00000004271	exosc2	98	78.893	ENSRNOG00000009245	Exosc2	99	78.893	Rattus_norvegicus
ENSPKIG00000004271	exosc2	98	79.585	ENSRBIG00000031203	-	99	79.585	Rhinopithecus_bieti
ENSPKIG00000004271	exosc2	100	72.449	ENSRBIG00000029791	-	100	72.449	Rhinopithecus_bieti
ENSPKIG00000004271	exosc2	100	71.429	ENSRROG00000043609	-	100	71.429	Rhinopithecus_roxellana
ENSPKIG00000004271	exosc2	98	79.585	ENSRROG00000010827	-	99	79.585	Rhinopithecus_roxellana
ENSPKIG00000004271	exosc2	90	42.953	YHR069C	-	83	42.953	Saccharomyces_cerevisiae
ENSPKIG00000004271	exosc2	98	79.931	ENSSBOG00000022712	EXOSC2	99	79.931	Saimiri_boliviensis_boliviensis
ENSPKIG00000004271	exosc2	98	78.547	ENSSHAG00000016050	EXOSC2	99	78.547	Sarcophilus_harrisii
ENSPKIG00000004271	exosc2	98	88.542	ENSSFOG00015011245	exosc2	99	88.542	Scleropages_formosus
ENSPKIG00000004271	exosc2	100	83.219	ENSSMAG00000003112	exosc2	100	83.219	Scophthalmus_maximus
ENSPKIG00000004271	exosc2	100	83.729	ENSSDUG00000004634	exosc2	100	83.729	Seriola_dumerili
ENSPKIG00000004271	exosc2	100	84.589	ENSSLDG00000010616	exosc2	100	84.589	Seriola_lalandi_dorsalis
ENSPKIG00000004271	exosc2	100	78.859	ENSSPUG00000013391	EXOSC2	100	78.859	Sphenodon_punctatus
ENSPKIG00000004271	exosc2	98	84.083	ENSSPAG00000022947	exosc2	99	84.083	Stegastes_partitus
ENSPKIG00000004271	exosc2	98	80.969	ENSSSCG00000005704	EXOSC2	99	80.969	Sus_scrofa
ENSPKIG00000004271	exosc2	100	75.850	ENSTGUG00000004697	EXOSC2	100	75.850	Taeniopygia_guttata
ENSPKIG00000004271	exosc2	99	77.397	ENSTRUG00000022436	exosc2	99	77.397	Takifugu_rubripes
ENSPKIG00000004271	exosc2	98	75.087	ENSTTRG00000015159	EXOSC2	99	75.087	Tursiops_truncatus
ENSPKIG00000004271	exosc2	93	78.022	ENSUAMG00000009651	EXOSC2	97	78.022	Ursus_americanus
ENSPKIG00000004271	exosc2	98	80.969	ENSUMAG00000018726	EXOSC2	99	80.969	Ursus_maritimus
ENSPKIG00000004271	exosc2	98	80.277	ENSVVUG00000027665	EXOSC2	99	80.277	Vulpes_vulpes
ENSPKIG00000004271	exosc2	98	76.125	ENSXETG00000001340	exosc2	99	76.125	Xenopus_tropicalis
ENSPKIG00000004271	exosc2	98	83.972	ENSXMAG00000005265	exosc2	98	83.972	Xiphophorus_maculatus