EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000004282 (Gene tree)
Gene ID: -
Gene Symbol: chd5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 23612 bases
Position: chrPGUA01000427.1:319577-343188
Accession: ZDB-GENE-120314-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000018975	ResIII	PF04851.15	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000035734	-	5243	-	ENSPKIP00000018896	381 (aa)	-	-
ENSPKIT00000035817	-	5388	-	ENSPKIP00000018975	1795 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000004282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000004282's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000004282	chd5	96	62.261	ENSPKIG00000012023	-	95	63.435
ENSPKIG00000004282	chd5	94	80.365	ENSPKIG00000008268	chd4a	93	67.891
ENSPKIG00000004282	chd5	91	77.912	ENSPKIG00000006305	chd3	92	73.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000004282	chd5	98	77.393	ENSG00000116254	CHD5	93	84.498	Homo_sapiens
ENSPKIG00000004282	chd5	98	76.990	ENSAMEG00000009880	CHD5	95	78.025	Ailuropoda_melanoleuca
ENSPKIG00000004282	chd5	95	85.997	ENSACIG00000012582	chd5	94	85.997	Amphilophus_citrinellus
ENSPKIG00000004282	chd5	91	89.919	ENSAOCG00000020356	chd5	82	89.919	Amphiprion_ocellaris
ENSPKIG00000004282	chd5	89	92.627	ENSAPLG00000015475	CHD5	91	82.812	Anas_platyrhynchos
ENSPKIG00000004282	chd5	87	78.580	ENSACAG00000002441	CHD5	94	76.216	Anolis_carolinensis
ENSPKIG00000004282	chd5	84	94.231	ENSANAG00000001078	CHD5	91	78.345	Aotus_nancymaae
ENSPKIG00000004282	chd5	95	81.420	ENSACLG00000003012	chd5	94	81.708	Astatotilapia_calliptera
ENSPKIG00000004282	chd5	92	86.399	ENSAMXG00000008921	chd5	97	87.060	Astyanax_mexicanus
ENSPKIG00000004282	chd5	91	92.093	ENSBTAG00000040477	CHD5	98	78.768	Bos_taurus
ENSPKIG00000004282	chd5	94	92.417	ENSCJAG00000000101	CHD5	94	78.181	Callithrix_jacchus
ENSPKIG00000004282	chd5	94	78.924	ENSCAFG00000019545	CHD5	98	79.146	Canis_familiaris
ENSPKIG00000004282	chd5	98	78.697	ENSCAFG00020008689	CHD5	91	79.297	Canis_lupus_dingo
ENSPKIG00000004282	chd5	95	86.611	ENSCHIG00000015027	CHD5	96	76.697	Capra_hircus
ENSPKIG00000004282	chd5	93	92.417	ENSTSYG00000033991	CHD5	95	76.944	Carlito_syrichta
ENSPKIG00000004282	chd5	98	78.525	ENSCAPG00000009294	CHD5	95	79.244	Cavia_aperea
ENSPKIG00000004282	chd5	98	78.470	ENSCPOG00000025080	CHD5	95	79.189	Cavia_porcellus
ENSPKIG00000004282	chd5	93	92.417	ENSCCAG00000024756	CHD5	94	78.481	Cebus_capucinus
ENSPKIG00000004282	chd5	93	92.417	ENSCATG00000043011	CHD5	94	77.748	Cercocebus_atys
ENSPKIG00000004282	chd5	98	78.306	ENSCLAG00000010589	CHD5	95	78.930	Chinchilla_lanigera
ENSPKIG00000004282	chd5	93	92.417	ENSCSAG00000000733	CHD5	94	78.463	Chlorocebus_sabaeus
ENSPKIG00000004282	chd5	94	77.078	ENSCPBG00000019363	CHD5	98	78.188	Chrysemys_picta_bellii
ENSPKIG00000004282	chd5	98	77.453	ENSCANG00000032302	CHD5	94	78.359	Colobus_angolensis_palliatus
ENSPKIG00000004282	chd5	57	80.094	ENSCGRG00001011042	Chd5	99	80.849	Cricetulus_griseus_chok1gshd
ENSPKIG00000004282	chd5	98	78.435	ENSCGRG00000011341	Chd5	96	77.969	Cricetulus_griseus_crigri
ENSPKIG00000004282	chd5	91	75.697	ENSDARG00000025789	chd4b	86	77.778	Danio_rerio
ENSPKIG00000004282	chd5	94	90.123	ENSDARG00000105083	chd5	95	84.441	Danio_rerio
ENSPKIG00000004282	chd5	93	77.841	ENSDNOG00000046342	CHD5	94	74.002	Dasypus_novemcinctus
ENSPKIG00000004282	chd5	98	78.045	ENSDORG00000005923	Chd5	95	78.680	Dipodomys_ordii
ENSPKIG00000004282	chd5	98	78.698	ENSEASG00005021464	CHD5	98	78.639	Equus_asinus_asinus
ENSPKIG00000004282	chd5	90	92.166	ENSECAG00000025043	CHD5	98	84.064	Equus_caballus
ENSPKIG00000004282	chd5	72	92.571	ENSEEUG00000002772	CHD5	67	92.571	Erinaceus_europaeus
ENSPKIG00000004282	chd5	98	84.308	ENSELUG00000010742	chd5	95	85.565	Esox_lucius
ENSPKIG00000004282	chd5	98	77.295	ENSFCAG00000006319	CHD5	94	78.277	Felis_catus
ENSPKIG00000004282	chd5	95	77.263	ENSFALG00000009740	CHD5	95	77.282	Ficedula_albicollis
ENSPKIG00000004282	chd5	98	78.571	ENSFDAG00000012881	CHD5	93	78.591	Fukomys_damarensis
ENSPKIG00000004282	chd5	95	78.019	ENSGALG00000000747	CHD5	94	78.294	Gallus_gallus
ENSPKIG00000004282	chd5	59	85.860	ENSGACG00000004389	chd5	93	86.162	Gasterosteus_aculeatus
ENSPKIG00000004282	chd5	90	92.093	ENSGAGG00000001590	CHD5	97	90.338	Gopherus_agassizii
ENSPKIG00000004282	chd5	81	85.668	ENSGGOG00000000708	CHD5	95	78.289	Gorilla_gorilla
ENSPKIG00000004282	chd5	95	82.424	ENSHBUG00000013453	chd5	94	82.711	Haplochromis_burtoni
ENSPKIG00000004282	chd5	98	78.340	ENSHGLG00000018184	CHD5	97	77.964	Heterocephalus_glaber_female
ENSPKIG00000004282	chd5	98	72.225	ENSHGLG00100013261	CHD5	94	72.619	Heterocephalus_glaber_male
ENSPKIG00000004282	chd5	98	85.827	ENSIPUG00000005446	chd5	98	86.166	Ictalurus_punctatus
ENSPKIG00000004282	chd5	95	83.665	ENSSTOG00000002778	CHD5	96	78.375	Ictidomys_tridecemlineatus
ENSPKIG00000004282	chd5	98	77.875	ENSJJAG00000019072	Chd5	94	79.212	Jaculus_jaculus
ENSPKIG00000004282	chd5	97	82.155	ENSLOCG00000004944	chd5	93	83.153	Lepisosteus_oculatus
ENSPKIG00000004282	chd5	98	77.305	ENSLAFG00000006348	CHD5	98	77.815	Loxodonta_africana
ENSPKIG00000004282	chd5	93	91.943	ENSMFAG00000033993	CHD5	98	78.812	Macaca_fascicularis
ENSPKIG00000004282	chd5	93	91.943	ENSMMUG00000016838	CHD5	96	78.071	Macaca_mulatta
ENSPKIG00000004282	chd5	93	92.417	ENSMNEG00000040044	CHD5	94	78.397	Macaca_nemestrina
ENSPKIG00000004282	chd5	93	79.398	ENSMLEG00000039166	CHD5	95	75.334	Mandrillus_leucophaeus
ENSPKIG00000004282	chd5	95	80.286	ENSMZEG00005000841	chd5	94	80.571	Maylandia_zebra
ENSPKIG00000004282	chd5	95	77.753	ENSMGAG00000001055	CHD5	94	77.814	Meleagris_gallopavo
ENSPKIG00000004282	chd5	95	79.807	ENSMICG00000017862	CHD5	94	79.900	Microcebus_murinus
ENSPKIG00000004282	chd5	98	78.368	ENSMOCG00000011049	Chd5	94	78.896	Microtus_ochrogaster
ENSPKIG00000004282	chd5	78	92.093	ENSMODG00000006294	CHD5	68	83.936	Monodelphis_domestica
ENSPKIG00000004282	chd5	91	89.113	ENSMALG00000002831	chd5	94	84.725	Monopterus_albus
ENSPKIG00000004282	chd5	98	77.573	MGP_CAROLIEiJ_G0026857	Chd5	95	78.118	Mus_caroli
ENSPKIG00000004282	chd5	98	78.039	ENSMUSG00000005045	Chd5	94	78.755	Mus_musculus
ENSPKIG00000004282	chd5	98	78.166	MGP_PahariEiJ_G0029205	Chd5	94	78.723	Mus_pahari
ENSPKIG00000004282	chd5	98	78.235	MGP_SPRETEiJ_G0027850	Chd5	95	77.957	Mus_spretus
ENSPKIG00000004282	chd5	94	86.667	ENSMPUG00000007122	CHD5	86	86.667	Mustela_putorius_furo
ENSPKIG00000004282	chd5	98	77.568	ENSNGAG00000019812	Chd5	92	77.958	Nannospalax_galili
ENSPKIG00000004282	chd5	91	92.073	ENSNLEG00000010320	CHD5	95	76.069	Nomascus_leucogenys
ENSPKIG00000004282	chd5	83	76.017	ENSOPRG00000004304	CHD5	80	76.180	Ochotona_princeps
ENSPKIG00000004282	chd5	98	78.325	ENSODEG00000010262	CHD5	93	79.651	Octodon_degus
ENSPKIG00000004282	chd5	95	81.233	ENSONIG00000000619	chd5	91	81.793	Oreochromis_niloticus
ENSPKIG00000004282	chd5	92	91.284	ENSOANG00000001819	CHD5	93	66.355	Ornithorhynchus_anatinus
ENSPKIG00000004282	chd5	95	83.534	ENSOGAG00000005703	CHD5	86	83.534	Otolemur_garnettii
ENSPKIG00000004282	chd5	94	91.667	ENSOARG00000013425	CHD5	95	77.135	Ovis_aries
ENSPKIG00000004282	chd5	98	77.297	ENSPPAG00000034048	CHD5	95	78.301	Pan_paniscus
ENSPKIG00000004282	chd5	98	76.806	ENSPPRG00000009453	CHD5	94	77.736	Panthera_pardus
ENSPKIG00000004282	chd5	93	75.864	ENSPTIG00000013926	CHD5	95	73.164	Panthera_tigris_altaica
ENSPKIG00000004282	chd5	98	77.297	ENSPTRG00000000075	CHD5	94	78.301	Pan_troglodytes
ENSPKIG00000004282	chd5	93	92.417	ENSPANG00000006765	CHD5	94	78.452	Papio_anubis
ENSPKIG00000004282	chd5	90	79.346	ENSPSIG00000006414	CHD5	95	72.500	Pelodiscus_sinensis
ENSPKIG00000004282	chd5	69	80.047	ENSPEMG00000014799	Chd5	96	80.994	Peromyscus_maniculatus_bairdii
ENSPKIG00000004282	chd5	93	92.093	ENSPCIG00000028310	CHD5	93	77.030	Phascolarctos_cinereus
ENSPKIG00000004282	chd5	91	91.286	ENSPLAG00000005343	chd5	88	91.286	Poecilia_latipinna
ENSPKIG00000004282	chd5	98	79.259	ENSPPYG00000001952	CHD5	95	79.856	Pongo_abelii
ENSPKIG00000004282	chd5	95	78.371	ENSPCOG00000022930	CHD5	94	78.036	Propithecus_coquereli
ENSPKIG00000004282	chd5	95	82.831	ENSPNYG00000003183	chd5	94	83.267	Pundamilia_nyererei
ENSPKIG00000004282	chd5	98	77.748	ENSRNOG00000011268	Chd5	95	78.355	Rattus_norvegicus
ENSPKIG00000004282	chd5	90	92.417	ENSRBIG00000032140	CHD5	93	78.659	Rhinopithecus_bieti
ENSPKIG00000004282	chd5	93	92.417	ENSRROG00000041146	CHD5	94	77.928	Rhinopithecus_roxellana
ENSPKIG00000004282	chd5	94	92.417	ENSSBOG00000001955	CHD5	97	80.073	Saimiri_boliviensis_boliviensis
ENSPKIG00000004282	chd5	95	77.152	ENSSHAG00000018641	CHD5	97	71.998	Sarcophilus_harrisii
ENSPKIG00000004282	chd5	94	90.693	ENSSFOG00015006296	chd5	94	85.954	Scleropages_formosus
ENSPKIG00000004282	chd5	95	86.472	ENSSDUG00000017526	chd5	97	86.472	Seriola_dumerili
ENSPKIG00000004282	chd5	92	92.958	ENSSPUG00000010622	CHD5	94	74.219	Sphenodon_punctatus
ENSPKIG00000004282	chd5	93	89.732	ENSSSCG00000003366	CHD5	98	79.101	Sus_scrofa
ENSPKIG00000004282	chd5	90	85.957	ENSTGUG00000002634	-	93	84.874	Taeniopygia_guttata
ENSPKIG00000004282	chd5	55	84.024	ENSTNIG00000004346	chd5	99	83.909	Tetraodon_nigroviridis
ENSPKIG00000004282	chd5	98	78.039	ENSTTRG00000010468	CHD5	94	78.575	Tursiops_truncatus
ENSPKIG00000004282	chd5	98	78.846	ENSUAMG00000024509	CHD5	98	79.457	Ursus_americanus
ENSPKIG00000004282	chd5	96	75.475	ENSUMAG00000024173	CHD5	96	76.204	Ursus_maritimus
ENSPKIG00000004282	chd5	86	92.667	ENSVVUG00000026480	CHD5	94	90.000	Vulpes_vulpes
ENSPKIG00000004282	chd5	98	74.657	ENSXETG00000002904	chd5	98	74.176	Xenopus_tropicalis
ENSPKIG00000004282	chd5	62	86.194	ENSXCOG00000014202	chd5	95	87.252	Xiphophorus_couchianus