EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000004305 (Gene tree)
Gene ID: 111843485
Gene Symbol: PRDM12 (1 of many)
Alias: -
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 8063 bases
Position: chrPGUA01000125.1:206116-214178
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000018931	zf-C2H2	PF00096.26	1.4e-13	1	2
ENSPKIP00000018931	zf-C2H2	PF00096.26	1.4e-13	2	2
ENSPKIP00000018931	zf-met	PF12874.7	7.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000035771	PRDM12 (1 of many)-201	1050	-	ENSPKIP00000018931	349 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000004305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000004305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000004305	PRDM12	72	39.286	ENSPKIG00000015492	prdm5	82	39.286
ENSPKIG00000004305	PRDM12	94	84.179	ENSPKIG00000007228	prdm12b	90	85.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000004305	PRDM12	94	80.539	ENSG00000130711	PRDM12	93	78.348	Homo_sapiens
ENSPKIG00000004305	PRDM12	94	77.971	ENSAPOG00000016051	prdm12b	95	77.686	Acanthochromis_polyacanthus
ENSPKIG00000004305	PRDM12	94	67.988	ENSAPOG00000018234	-	96	64.672	Acanthochromis_polyacanthus
ENSPKIG00000004305	PRDM12	94	79.817	ENSAMEG00000016234	PRDM12	99	79.817	Ailuropoda_melanoleuca
ENSPKIG00000004305	PRDM12	95	81.287	ENSACIG00000019578	prdm12b	91	81.287	Amphilophus_citrinellus
ENSPKIG00000004305	PRDM12	94	76.812	ENSACIG00000005193	-	94	75.207	Amphilophus_citrinellus
ENSPKIG00000004305	PRDM12	94	82.301	ENSAOCG00000015040	prdm12b	94	79.552	Amphiprion_ocellaris
ENSPKIG00000004305	PRDM12	94	81.791	ENSAPEG00000015092	prdm12b	94	78.151	Amphiprion_percula
ENSPKIG00000004305	PRDM12	94	74.336	ENSAPEG00000022849	-	87	75.221	Amphiprion_percula
ENSPKIG00000004305	PRDM12	94	82.317	ENSATEG00000014595	-	96	82.317	Anabas_testudineus
ENSPKIG00000004305	PRDM12	99	78.286	ENSANAG00000020616	PRDM12	100	78.000	Aotus_nancymaae
ENSPKIG00000004305	PRDM12	94	76.608	ENSACLG00000007631	-	87	77.616	Astatotilapia_calliptera
ENSPKIG00000004305	PRDM12	94	80.303	ENSACLG00000011876	prdm12b	90	80.303	Astatotilapia_calliptera
ENSPKIG00000004305	PRDM12	95	81.381	ENSAMXG00000033665	prdm12b	94	78.470	Astyanax_mexicanus
ENSPKIG00000004305	PRDM12	94	81.098	ENSAMXG00000008540	PRDM12	90	81.098	Astyanax_mexicanus
ENSPKIG00000004305	PRDM12	94	80.539	ENSBTAG00000023797	PRDM12	94	78.348	Bos_taurus
ENSPKIG00000004305	PRDM12	94	80.539	ENSCJAG00000020540	PRDM12	95	78.063	Callithrix_jacchus
ENSPKIG00000004305	PRDM12	82	81.100	ENSCAFG00000023076	PRDM12	93	78.571	Canis_familiaris
ENSPKIG00000004305	PRDM12	94	80.539	ENSCAFG00020024046	PRDM12	94	78.348	Canis_lupus_dingo
ENSPKIG00000004305	PRDM12	94	80.539	ENSCHIG00000025005	PRDM12	94	78.348	Capra_hircus
ENSPKIG00000004305	PRDM12	91	79.503	ENSCPOG00000005901	PRDM12	95	79.503	Cavia_porcellus
ENSPKIG00000004305	PRDM12	94	80.539	ENSCCAG00000037485	PRDM12	94	78.063	Cebus_capucinus
ENSPKIG00000004305	PRDM12	94	80.539	ENSCATG00000020327	PRDM12	94	78.063	Cercocebus_atys
ENSPKIG00000004305	PRDM12	94	80.240	ENSCLAG00000005499	PRDM12	89	80.240	Chinchilla_lanigera
ENSPKIG00000004305	PRDM12	94	80.539	ENSCSAG00000014756	PRDM12	94	78.063	Chlorocebus_sabaeus
ENSPKIG00000004305	PRDM12	99	78.063	ENSCPBG00000022628	PRDM12	97	77.684	Chrysemys_picta_bellii
ENSPKIG00000004305	PRDM12	94	80.539	ENSCGRG00001015005	Prdm12	93	78.348	Cricetulus_griseus_chok1gshd
ENSPKIG00000004305	PRDM12	94	75.216	ENSCVAG00000000944	-	89	77.233	Cyprinodon_variegatus
ENSPKIG00000004305	PRDM12	94	80.240	ENSCVAG00000017166	prdm12b	90	80.838	Cyprinodon_variegatus
ENSPKIG00000004305	PRDM12	98	80.580	ENSDARG00000007430	prdm12b	94	80.580	Danio_rerio
ENSPKIG00000004305	PRDM12	94	80.240	ENSDNOG00000042302	PRDM12	94	78.063	Dasypus_novemcinctus
ENSPKIG00000004305	PRDM12	91	61.404	ENSEBUG00000016780	prdm12b	76	63.158	Eptatretus_burgeri
ENSPKIG00000004305	PRDM12	99	78.286	ENSEASG00005008472	PRDM12	94	78.348	Equus_asinus_asinus
ENSPKIG00000004305	PRDM12	99	78.571	ENSECAG00000005933	PRDM12	94	78.632	Equus_caballus
ENSPKIG00000004305	PRDM12	94	82.012	ENSELUG00000013674	PRDM12	90	81.176	Esox_lucius
ENSPKIG00000004305	PRDM12	94	82.635	ENSELUG00000009905	prdm12b	89	82.335	Esox_lucius
ENSPKIG00000004305	PRDM12	94	80.539	ENSFCAG00000043086	PRDM12	94	78.348	Felis_catus
ENSPKIG00000004305	PRDM12	99	78.063	ENSFALG00000001445	PRDM12	87	77.684	Ficedula_albicollis
ENSPKIG00000004305	PRDM12	94	77.551	ENSFHEG00000007746	-	88	76.385	Fundulus_heteroclitus
ENSPKIG00000004305	PRDM12	94	79.525	ENSFHEG00000003944	prdm12b	90	80.119	Fundulus_heteroclitus
ENSPKIG00000004305	PRDM12	98	80.117	ENSGMOG00000011797	prdm12b	97	79.827	Gadus_morhua
ENSPKIG00000004305	PRDM12	99	78.063	ENSGALG00000003895	PRDM12	97	77.684	Gallus_gallus
ENSPKIG00000004305	PRDM12	94	81.928	ENSGAFG00000010827	prdm12b	89	81.928	Gambusia_affinis
ENSPKIG00000004305	PRDM12	98	78.797	ENSGACG00000016713	prdm12b	94	78.223	Gasterosteus_aculeatus
ENSPKIG00000004305	PRDM12	99	78.063	ENSGAGG00000014083	PRDM12	97	77.684	Gopherus_agassizii
ENSPKIG00000004305	PRDM12	94	80.240	ENSGGOG00000010568	PRDM12	93	78.063	Gorilla_gorilla
ENSPKIG00000004305	PRDM12	94	77.193	ENSHBUG00000022537	-	80	77.616	Haplochromis_burtoni
ENSPKIG00000004305	PRDM12	94	81.548	ENSHBUG00000022878	prdm12b	90	79.941	Haplochromis_burtoni
ENSPKIG00000004305	PRDM12	94	79.940	ENSHGLG00000013939	PRDM12	93	77.778	Heterocephalus_glaber_female
ENSPKIG00000004305	PRDM12	88	77.670	ENSHCOG00000021167	-	85	77.670	Hippocampus_comes
ENSPKIG00000004305	PRDM12	94	77.193	ENSHCOG00000003663	prdm12b	87	77.193	Hippocampus_comes
ENSPKIG00000004305	PRDM12	94	80.793	ENSIPUG00000019544	PRDM12	90	80.793	Ictalurus_punctatus
ENSPKIG00000004305	PRDM12	94	82.727	ENSIPUG00000017053	prdm12b	94	79.772	Ictalurus_punctatus
ENSPKIG00000004305	PRDM12	99	77.429	ENSSTOG00000005986	PRDM12	89	77.429	Ictidomys_tridecemlineatus
ENSPKIG00000004305	PRDM12	96	79.179	ENSJJAG00000005424	Prdm12	98	80.240	Jaculus_jaculus
ENSPKIG00000004305	PRDM12	94	76.204	ENSKMAG00000016921	prdm12b	87	77.054	Kryptolebias_marmoratus
ENSPKIG00000004305	PRDM12	88	80.645	ENSKMAG00000021205	-	86	80.645	Kryptolebias_marmoratus
ENSPKIG00000004305	PRDM12	94	80.539	ENSLBEG00000017769	prdm12b	93	77.273	Labrus_bergylta
ENSPKIG00000004305	PRDM12	94	79.822	ENSLBEG00000007776	-	89	79.822	Labrus_bergylta
ENSPKIG00000004305	PRDM12	99	80.000	ENSLACG00000017560	PRDM12	96	80.000	Latimeria_chalumnae
ENSPKIG00000004305	PRDM12	97	83.383	ENSLOCG00000005429	prdm12b	96	80.165	Lepisosteus_oculatus
ENSPKIG00000004305	PRDM12	94	80.967	ENSLAFG00000006979	PRDM12	93	78.736	Loxodonta_africana
ENSPKIG00000004305	PRDM12	94	80.539	ENSMFAG00000040322	PRDM12	93	78.063	Macaca_fascicularis
ENSPKIG00000004305	PRDM12	94	80.539	ENSMNEG00000037234	PRDM12	94	78.063	Macaca_nemestrina
ENSPKIG00000004305	PRDM12	94	77.059	ENSMAMG00000018988	-	86	77.647	Mastacembelus_armatus
ENSPKIG00000004305	PRDM12	94	81.602	ENSMAMG00000013212	prdm12b	94	79.155	Mastacembelus_armatus
ENSPKIG00000004305	PRDM12	94	76.608	ENSMZEG00005000415	PRDM12	86	77.616	Maylandia_zebra
ENSPKIG00000004305	PRDM12	99	78.063	ENSMGAG00000005438	PRDM12	97	77.684	Meleagris_gallopavo
ENSPKIG00000004305	PRDM12	99	78.348	ENSMAUG00000013040	Prdm12	93	78.348	Mesocricetus_auratus
ENSPKIG00000004305	PRDM12	99	78.063	ENSMICG00000015480	PRDM12	93	78.902	Microcebus_murinus
ENSPKIG00000004305	PRDM12	99	78.632	ENSMOCG00000021026	Prdm12	93	78.632	Microtus_ochrogaster
ENSPKIG00000004305	PRDM12	99	77.778	ENSMODG00000012108	PRDM12	97	77.401	Monodelphis_domestica
ENSPKIG00000004305	PRDM12	79	80.287	ENSMALG00000021901	prdm12b	85	79.211	Monopterus_albus
ENSPKIG00000004305	PRDM12	94	80.539	MGP_CAROLIEiJ_G0023414	Prdm12	93	78.632	Mus_caroli
ENSPKIG00000004305	PRDM12	94	80.539	ENSMUSG00000079466	Prdm12	93	78.632	Mus_musculus
ENSPKIG00000004305	PRDM12	94	80.539	MGP_PahariEiJ_G0024871	Prdm12	93	78.632	Mus_pahari
ENSPKIG00000004305	PRDM12	94	80.539	MGP_SPRETEiJ_G0024331	Prdm12	93	78.632	Mus_spretus
ENSPKIG00000004305	PRDM12	94	80.539	ENSNGAG00000018480	Prdm12	94	79.412	Nannospalax_galili
ENSPKIG00000004305	PRDM12	94	80.826	ENSNBRG00000006727	prdm12b	90	80.826	Neolamprologus_brichardi
ENSPKIG00000004305	PRDM12	98	72.080	ENSNBRG00000024312	-	96	72.934	Neolamprologus_brichardi
ENSPKIG00000004305	PRDM12	99	70.085	ENSMEUG00000003828	PRDM12	83	83.654	Notamacropus_eugenii
ENSPKIG00000004305	PRDM12	94	79.641	ENSOPRG00000008680	PRDM12	98	79.641	Ochotona_princeps
ENSPKIG00000004305	PRDM12	99	78.348	ENSODEG00000016282	PRDM12	64	78.348	Octodon_degus
ENSPKIG00000004305	PRDM12	60	75.234	ENSOANG00000001043	PRDM12	94	75.701	Ornithorhynchus_anatinus
ENSPKIG00000004305	PRDM12	87	79.221	ENSOCUG00000008241	PRDM12	96	79.221	Oryctolagus_cuniculus
ENSPKIG00000004305	PRDM12	94	79.532	ENSORLG00000007114	prdm12b	90	79.532	Oryzias_latipes
ENSPKIG00000004305	PRDM12	94	76.833	ENSORLG00000017558	-	87	78.006	Oryzias_latipes
ENSPKIG00000004305	PRDM12	94	76.608	ENSORLG00020013167	-	87	77.391	Oryzias_latipes_hni
ENSPKIG00000004305	PRDM12	94	79.532	ENSORLG00020019565	prdm12b	96	75.616	Oryzias_latipes_hni
ENSPKIG00000004305	PRDM12	94	76.833	ENSORLG00015003435	-	87	78.006	Oryzias_latipes_hsok
ENSPKIG00000004305	PRDM12	94	78.363	ENSORLG00015007621	prdm12b	90	79.009	Oryzias_latipes_hsok
ENSPKIG00000004305	PRDM12	94	77.971	ENSOMEG00000004134	prdm12b	90	78.841	Oryzias_melastigma
ENSPKIG00000004305	PRDM12	98	73.611	ENSOMEG00000007762	-	96	75.278	Oryzias_melastigma
ENSPKIG00000004305	PRDM12	94	80.539	ENSOGAG00000007557	PRDM12	98	80.539	Otolemur_garnettii
ENSPKIG00000004305	PRDM12	85	76.821	ENSPPAG00000031506	-	99	76.490	Pan_paniscus
ENSPKIG00000004305	PRDM12	99	72.934	ENSPPRG00000023024	PRDM12	87	73.410	Panthera_pardus
ENSPKIG00000004305	PRDM12	94	80.539	ENSPTRG00000021475	PRDM12	93	78.348	Pan_troglodytes
ENSPKIG00000004305	PRDM12	94	80.539	ENSPTRG00000043324	-	93	78.348	Pan_troglodytes
ENSPKIG00000004305	PRDM12	94	80.539	ENSPANG00000025967	PRDM12	94	78.063	Papio_anubis
ENSPKIG00000004305	PRDM12	99	77.778	ENSPSIG00000006739	PRDM12	97	77.401	Pelodiscus_sinensis
ENSPKIG00000004305	PRDM12	94	78.679	ENSPMGG00000002356	-	86	78.679	Periophthalmus_magnuspinnatus
ENSPKIG00000004305	PRDM12	95	81.682	ENSPMGG00000008867	prdm12b	90	81.682	Periophthalmus_magnuspinnatus
ENSPKIG00000004305	PRDM12	99	78.063	ENSPEMG00000009969	Prdm12	93	78.063	Peromyscus_maniculatus_bairdii
ENSPKIG00000004305	PRDM12	99	77.778	ENSPCIG00000024119	PRDM12	97	77.401	Phascolarctos_cinereus
ENSPKIG00000004305	PRDM12	94	81.250	ENSPFOG00000019841	prdm12b	91	80.060	Poecilia_formosa
ENSPKIG00000004305	PRDM12	94	81.928	ENSPLAG00000016626	prdm12b	93	79.143	Poecilia_latipinna
ENSPKIG00000004305	PRDM12	91	81.366	ENSPMEG00000016698	prdm12b	92	78.529	Poecilia_mexicana
ENSPKIG00000004305	PRDM12	90	76.235	ENSPREG00000003211	-	87	75.926	Poecilia_reticulata
ENSPKIG00000004305	PRDM12	94	81.627	ENSPREG00000015073	prdm12b	92	78.857	Poecilia_reticulata
ENSPKIG00000004305	PRDM12	99	78.632	ENSPPYG00000019694	PRDM12	97	78.348	Pongo_abelii
ENSPKIG00000004305	PRDM12	94	80.539	ENSPCOG00000022255	PRDM12	93	78.348	Propithecus_coquereli
ENSPKIG00000004305	PRDM12	94	80.539	ENSPVAG00000001511	PRDM12	93	78.348	Pteropus_vampyrus
ENSPKIG00000004305	PRDM12	94	81.416	ENSPNYG00000009607	prdm12b	90	80.826	Pundamilia_nyererei
ENSPKIG00000004305	PRDM12	94	76.608	ENSPNYG00000013589	-	86	77.616	Pundamilia_nyererei
ENSPKIG00000004305	PRDM12	94	78.979	ENSPNAG00000013396	PRDM12	92	76.791	Pygocentrus_nattereri
ENSPKIG00000004305	PRDM12	94	82.424	ENSPNAG00000024532	prdm12b	94	79.539	Pygocentrus_nattereri
ENSPKIG00000004305	PRDM12	94	80.539	ENSRNOG00000009218	Prdm12	93	78.632	Rattus_norvegicus
ENSPKIG00000004305	PRDM12	92	80.061	ENSRBIG00000042712	PRDM12	88	79.091	Rhinopithecus_bieti
ENSPKIG00000004305	PRDM12	93	80.303	ENSRROG00000043554	PRDM12	100	80.000	Rhinopithecus_roxellana
ENSPKIG00000004305	PRDM12	99	77.273	ENSSHAG00000015972	PRDM12	97	76.901	Sarcophilus_harrisii
ENSPKIG00000004305	PRDM12	94	78.674	ENSSMAG00000003754	prdm12b	89	79.539	Scophthalmus_maximus
ENSPKIG00000004305	PRDM12	99	76.945	ENSSDUG00000019071	-	95	76.945	Seriola_dumerili
ENSPKIG00000004305	PRDM12	94	80.870	ENSSDUG00000023498	prdm12b	90	81.449	Seriola_dumerili
ENSPKIG00000004305	PRDM12	94	79.635	ENSSLDG00000013562	-	93	79.635	Seriola_lalandi_dorsalis
ENSPKIG00000004305	PRDM12	94	80.580	ENSSLDG00000009557	prdm12b	90	80.580	Seriola_lalandi_dorsalis
ENSPKIG00000004305	PRDM12	99	78.902	ENSSPUG00000013424	PRDM12	97	77.966	Sphenodon_punctatus
ENSPKIG00000004305	PRDM12	94	80.826	ENSSPAG00000018824	prdm12b	90	80.826	Stegastes_partitus
ENSPKIG00000004305	PRDM12	94	74.850	ENSSPAG00000022420	-	87	74.850	Stegastes_partitus
ENSPKIG00000004305	PRDM12	94	80.539	ENSSSCG00000005703	PRDM12	94	78.348	Sus_scrofa
ENSPKIG00000004305	PRDM12	94	78.378	ENSTRUG00000013239	-	93	78.012	Takifugu_rubripes
ENSPKIG00000004305	PRDM12	94	81.818	ENSTRUG00000018659	prdm12b	90	81.818	Takifugu_rubripes
ENSPKIG00000004305	PRDM12	94	75.904	ENSTNIG00000005859	-	92	75.904	Tetraodon_nigroviridis
ENSPKIG00000004305	PRDM12	94	81.212	ENSTNIG00000009020	prdm12b	89	81.212	Tetraodon_nigroviridis
ENSPKIG00000004305	PRDM12	94	80.539	ENSUAMG00000009653	PRDM12	94	78.348	Ursus_americanus
ENSPKIG00000004305	PRDM12	94	80.539	ENSVVUG00000027662	PRDM12	77	80.539	Vulpes_vulpes
ENSPKIG00000004305	PRDM12	94	82.831	ENSXCOG00000002836	prdm12b	94	79.143	Xiphophorus_couchianus
ENSPKIG00000004305	PRDM12	94	76.696	ENSXMAG00000028012	-	88	76.420	Xiphophorus_maculatus
ENSPKIG00000004305	PRDM12	94	81.737	ENSXMAG00000005537	prdm12b	94	77.557	Xiphophorus_maculatus