EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000004416 (Gene tree)
Gene ID: 111848219
Gene Symbol: edc3
Alias: -
Full Name: enhancer of mRNA-decapping protein 3-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 12378 bases
Position: chrPGUA01000179.1:396854-409231
Accession: 111848219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000019109	FDF	PF09532.10	5.5e-06	1	1
ENSPKIP00000019109	LSM14	PF12701.7	9.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000035952	-	6651	-	ENSPKIP00000019109	506 (aa)	XP_023675823	UPI000CD64A21

Gene Model

Click here to download ENSPKIG00000004416's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000004416's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000004416	edc3	99	73.518	ENSPKIG00000019810	EDC3	99	73.518

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000004416	edc3	100	69.336	ENSG00000179151	EDC3	100	83.333	Homo_sapiens
ENSPKIG00000004416	edc3	99	59.020	ENSAPOG00000008655	EDC3	99	59.020	Acanthochromis_polyacanthus
ENSPKIG00000004416	edc3	100	75.099	ENSAPOG00000010791	edc3	100	75.099	Acanthochromis_polyacanthus
ENSPKIG00000004416	edc3	100	69.922	ENSAMEG00000008963	EDC3	100	68.945	Ailuropoda_melanoleuca
ENSPKIG00000004416	edc3	99	64.300	ENSACIG00000005330	EDC3	99	63.938	Amphilophus_citrinellus
ENSPKIG00000004416	edc3	100	75.494	ENSACIG00000017751	edc3	100	75.494	Amphilophus_citrinellus
ENSPKIG00000004416	edc3	99	62.353	ENSAOCG00000009103	-	99	62.157	Amphiprion_ocellaris
ENSPKIG00000004416	edc3	100	75.494	ENSAOCG00000005431	edc3	100	75.494	Amphiprion_ocellaris
ENSPKIG00000004416	edc3	99	62.549	ENSAPEG00000007841	EDC3	99	62.353	Amphiprion_percula
ENSPKIG00000004416	edc3	100	75.494	ENSAPEG00000000968	edc3	100	75.494	Amphiprion_percula
ENSPKIG00000004416	edc3	100	76.087	ENSATEG00000015505	edc3	100	76.087	Anabas_testudineus
ENSPKIG00000004416	edc3	100	62.598	ENSATEG00000004205	-	100	62.598	Anabas_testudineus
ENSPKIG00000004416	edc3	90	67.686	ENSAPLG00000008957	EDC3	100	66.376	Anas_platyrhynchos
ENSPKIG00000004416	edc3	78	66.917	ENSACAG00000000460	-	100	65.414	Anolis_carolinensis
ENSPKIG00000004416	edc3	100	69.515	ENSANAG00000024078	EDC3	100	68.544	Aotus_nancymaae
ENSPKIG00000004416	edc3	99	62.451	ENSACLG00000018776	-	99	62.451	Astatotilapia_calliptera
ENSPKIG00000004416	edc3	100	74.803	ENSACLG00000007232	edc3	100	74.803	Astatotilapia_calliptera
ENSPKIG00000004416	edc3	100	76.621	ENSAMXG00000001589	edc3	100	76.621	Astyanax_mexicanus
ENSPKIG00000004416	edc3	100	68.945	ENSBTAG00000007308	EDC3	100	67.969	Bos_taurus
ENSPKIG00000004416	edc3	100	69.531	ENSCJAG00000017681	EDC3	100	68.555	Callithrix_jacchus
ENSPKIG00000004416	edc3	100	69.531	ENSCAFG00000017935	EDC3	100	68.555	Canis_familiaris
ENSPKIG00000004416	edc3	100	69.531	ENSCAFG00020003909	EDC3	100	68.555	Canis_lupus_dingo
ENSPKIG00000004416	edc3	100	69.141	ENSCHIG00000023658	EDC3	100	68.164	Capra_hircus
ENSPKIG00000004416	edc3	100	70.508	ENSTSYG00000004822	EDC3	100	69.531	Carlito_syrichta
ENSPKIG00000004416	edc3	100	70.117	ENSCPOG00000015595	EDC3	100	69.336	Cavia_porcellus
ENSPKIG00000004416	edc3	100	69.531	ENSCCAG00000021663	EDC3	100	68.555	Cebus_capucinus
ENSPKIG00000004416	edc3	100	69.531	ENSCATG00000037511	EDC3	100	68.555	Cercocebus_atys
ENSPKIG00000004416	edc3	100	69.922	ENSCLAG00000005700	EDC3	100	69.141	Chinchilla_lanigera
ENSPKIG00000004416	edc3	100	69.531	ENSCSAG00000014239	EDC3	100	68.555	Chlorocebus_sabaeus
ENSPKIG00000004416	edc3	100	69.531	ENSCPBG00000024239	EDC3	100	68.555	Chrysemys_picta_bellii
ENSPKIG00000004416	edc3	100	35.350	ENSCING00000022142	-	99	34.981	Ciona_intestinalis
ENSPKIG00000004416	edc3	100	69.531	ENSCANG00000028699	EDC3	100	68.555	Colobus_angolensis_palliatus
ENSPKIG00000004416	edc3	100	69.922	ENSCGRG00001013874	Edc3	100	68.945	Cricetulus_griseus_chok1gshd
ENSPKIG00000004416	edc3	100	69.922	ENSCGRG00000011885	Edc3	100	68.945	Cricetulus_griseus_crigri
ENSPKIG00000004416	edc3	99	75.248	ENSCSEG00000012996	edc3	99	75.248	Cynoglossus_semilaevis
ENSPKIG00000004416	edc3	100	75.296	ENSCVAG00000008023	edc3	100	75.296	Cyprinodon_variegatus
ENSPKIG00000004416	edc3	99	75.342	ENSDARG00000051931	edc3	99	75.342	Danio_rerio
ENSPKIG00000004416	edc3	100	61.776	ENSDNOG00000030661	EDC3	100	61.776	Dasypus_novemcinctus
ENSPKIG00000004416	edc3	65	83.333	ENSETEG00000002398	-	64	83.333	Echinops_telfairi
ENSPKIG00000004416	edc3	100	69.141	ENSEASG00005005071	EDC3	100	67.969	Equus_asinus_asinus
ENSPKIG00000004416	edc3	100	69.141	ENSECAG00000017994	EDC3	100	67.969	Equus_caballus
ENSPKIG00000004416	edc3	100	71.006	ENSELUG00000005794	edc3	100	71.006	Esox_lucius
ENSPKIG00000004416	edc3	100	68.039	ENSELUG00000007607	EDC3	100	66.929	Esox_lucius
ENSPKIG00000004416	edc3	100	69.727	ENSFCAG00000002014	EDC3	100	68.750	Felis_catus
ENSPKIG00000004416	edc3	98	67.131	ENSFALG00000004543	EDC3	96	65.737	Ficedula_albicollis
ENSPKIG00000004416	edc3	100	69.922	ENSFDAG00000012582	EDC3	100	68.945	Fukomys_damarensis
ENSPKIG00000004416	edc3	100	74.901	ENSFHEG00000009375	edc3	100	74.901	Fundulus_heteroclitus
ENSPKIG00000004416	edc3	100	74.111	ENSGMOG00000002715	edc3	100	74.308	Gadus_morhua
ENSPKIG00000004416	edc3	100	69.276	ENSGALG00000040181	EDC3	100	68.102	Gallus_gallus
ENSPKIG00000004416	edc3	100	73.518	ENSGAFG00000014433	edc3	100	73.518	Gambusia_affinis
ENSPKIG00000004416	edc3	99	62.963	ENSGACG00000014671	EDC3	99	62.622	Gasterosteus_aculeatus
ENSPKIG00000004416	edc3	100	72.530	ENSGACG00000009783	edc3	100	72.530	Gasterosteus_aculeatus
ENSPKIG00000004416	edc3	100	69.804	ENSGAGG00000023477	EDC3	100	68.824	Gopherus_agassizii
ENSPKIG00000004416	edc3	100	69.336	ENSGGOG00000003552	EDC3	100	68.359	Gorilla_gorilla
ENSPKIG00000004416	edc3	100	74.803	ENSHBUG00000003635	edc3	100	74.803	Haplochromis_burtoni
ENSPKIG00000004416	edc3	99	62.648	ENSHBUG00000020817	EDC3	99	62.648	Haplochromis_burtoni
ENSPKIG00000004416	edc3	100	72.925	ENSHCOG00000016834	edc3	100	73.913	Hippocampus_comes
ENSPKIG00000004416	edc3	99	74.606	ENSIPUG00000005695	edc3	100	74.606	Ictalurus_punctatus
ENSPKIG00000004416	edc3	100	69.531	ENSSTOG00000013936	EDC3	100	68.555	Ictidomys_tridecemlineatus
ENSPKIG00000004416	edc3	100	69.922	ENSJJAG00000008074	Edc3	100	68.945	Jaculus_jaculus
ENSPKIG00000004416	edc3	100	74.901	ENSKMAG00000001243	edc3	100	74.901	Kryptolebias_marmoratus
ENSPKIG00000004416	edc3	99	60.352	ENSKMAG00000001987	EDC3	99	60.156	Kryptolebias_marmoratus
ENSPKIG00000004416	edc3	100	74.704	ENSLBEG00000013435	edc3	99	75.099	Labrus_bergylta
ENSPKIG00000004416	edc3	100	62.451	ENSLBEG00000017984	EDC3	100	62.062	Labrus_bergylta
ENSPKIG00000004416	edc3	100	70.192	ENSLACG00000014149	EDC3	100	69.038	Latimeria_chalumnae
ENSPKIG00000004416	edc3	100	72.692	ENSLOCG00000014625	edc3	100	72.495	Lepisosteus_oculatus
ENSPKIG00000004416	edc3	100	69.863	ENSLAFG00000002992	EDC3	100	68.689	Loxodonta_africana
ENSPKIG00000004416	edc3	100	69.727	ENSMFAG00000043074	EDC3	100	68.750	Macaca_fascicularis
ENSPKIG00000004416	edc3	100	69.727	ENSMMUG00000011071	EDC3	100	68.750	Macaca_mulatta
ENSPKIG00000004416	edc3	100	69.727	ENSMNEG00000035316	EDC3	100	68.750	Macaca_nemestrina
ENSPKIG00000004416	edc3	100	69.531	ENSMLEG00000030372	EDC3	100	68.555	Mandrillus_leucophaeus
ENSPKIG00000004416	edc3	100	74.359	ENSMAMG00000000505	edc3	100	74.359	Mastacembelus_armatus
ENSPKIG00000004416	edc3	99	60.938	ENSMAMG00000005423	-	99	60.938	Mastacembelus_armatus
ENSPKIG00000004416	edc3	99	62.598	ENSMZEG00005005654	EDC3	99	62.598	Maylandia_zebra
ENSPKIG00000004416	edc3	100	74.606	ENSMZEG00005004892	edc3	100	74.606	Maylandia_zebra
ENSPKIG00000004416	edc3	100	69.080	ENSMGAG00000002617	EDC3	100	68.102	Meleagris_gallopavo
ENSPKIG00000004416	edc3	100	70.117	ENSMICG00000043190	EDC3	100	69.141	Microcebus_murinus
ENSPKIG00000004416	edc3	100	69.141	ENSMOCG00000016205	Edc3	100	68.164	Microtus_ochrogaster
ENSPKIG00000004416	edc3	99	74.653	ENSMMOG00000012278	edc3	99	74.851	Mola_mola
ENSPKIG00000004416	edc3	100	68.945	ENSMODG00000009442	EDC3	100	67.969	Monodelphis_domestica
ENSPKIG00000004416	edc3	100	74.704	ENSMALG00000008658	edc3	100	74.704	Monopterus_albus
ENSPKIG00000004416	edc3	100	69.727	MGP_CAROLIEiJ_G0032280	Edc3	100	80.702	Mus_caroli
ENSPKIG00000004416	edc3	100	70.312	ENSMUSG00000038957	Edc3	100	80.702	Mus_musculus
ENSPKIG00000004416	edc3	100	70.312	MGP_PahariEiJ_G0015146	Edc3	100	80.702	Mus_pahari
ENSPKIG00000004416	edc3	100	69.727	MGP_SPRETEiJ_G0033420	Edc3	100	80.702	Mus_spretus
ENSPKIG00000004416	edc3	100	69.922	ENSMPUG00000017293	EDC3	100	68.945	Mustela_putorius_furo
ENSPKIG00000004416	edc3	100	69.455	ENSMLUG00000016382	EDC3	100	68.482	Myotis_lucifugus
ENSPKIG00000004416	edc3	100	68.750	ENSNGAG00000010923	Edc3	100	67.969	Nannospalax_galili
ENSPKIG00000004416	edc3	100	74.213	ENSNBRG00000002434	edc3	100	74.213	Neolamprologus_brichardi
ENSPKIG00000004416	edc3	99	62.451	ENSNBRG00000007881	EDC3	99	62.451	Neolamprologus_brichardi
ENSPKIG00000004416	edc3	100	60.547	ENSNLEG00000014577	EDC3	100	59.570	Nomascus_leucogenys
ENSPKIG00000004416	edc3	100	68.885	ENSMEUG00000009077	EDC3	100	67.906	Notamacropus_eugenii
ENSPKIG00000004416	edc3	80	83.333	ENSOPRG00000009540	-	79	83.333	Ochotona_princeps
ENSPKIG00000004416	edc3	99	62.162	ENSONIG00000002932	-	99	62.162	Oreochromis_niloticus
ENSPKIG00000004416	edc3	100	75.000	ENSONIG00000008434	edc3	100	75.000	Oreochromis_niloticus
ENSPKIG00000004416	edc3	78	65.087	ENSOCUG00000017740	EDC3	86	63.840	Oryctolagus_cuniculus
ENSPKIG00000004416	edc3	100	73.320	ENSORLG00000004883	edc3	100	73.320	Oryzias_latipes
ENSPKIG00000004416	edc3	99	61.462	ENSORLG00000014399	-	98	61.462	Oryzias_latipes
ENSPKIG00000004416	edc3	99	61.462	ENSORLG00020019446	-	99	61.462	Oryzias_latipes_hni
ENSPKIG00000004416	edc3	100	73.518	ENSORLG00020012262	edc3	100	73.518	Oryzias_latipes_hni
ENSPKIG00000004416	edc3	100	73.518	ENSORLG00015005634	edc3	100	73.518	Oryzias_latipes_hsok
ENSPKIG00000004416	edc3	99	61.462	ENSORLG00015017635	-	95	61.462	Oryzias_latipes_hsok
ENSPKIG00000004416	edc3	99	60.672	ENSOMEG00000017354	EDC3	99	60.672	Oryzias_melastigma
ENSPKIG00000004416	edc3	100	75.099	ENSOMEG00000014026	edc3	100	75.099	Oryzias_melastigma
ENSPKIG00000004416	edc3	100	70.117	ENSOGAG00000014441	EDC3	100	69.141	Otolemur_garnettii
ENSPKIG00000004416	edc3	100	68.421	ENSOARG00000003476	EDC3	100	67.836	Ovis_aries
ENSPKIG00000004416	edc3	100	69.336	ENSPPAG00000040143	EDC3	100	68.359	Pan_paniscus
ENSPKIG00000004416	edc3	100	69.727	ENSPPRG00000006257	EDC3	100	68.750	Panthera_pardus
ENSPKIG00000004416	edc3	100	69.727	ENSPTIG00000017424	EDC3	100	68.750	Panthera_tigris_altaica
ENSPKIG00000004416	edc3	100	69.336	ENSPTRG00000007279	EDC3	100	68.359	Pan_troglodytes
ENSPKIG00000004416	edc3	100	69.531	ENSPANG00000015997	EDC3	100	68.555	Papio_anubis
ENSPKIG00000004416	edc3	100	66.148	ENSPSIG00000008474	EDC3	100	64.981	Pelodiscus_sinensis
ENSPKIG00000004416	edc3	100	73.518	ENSPMGG00000007223	edc3	100	73.518	Periophthalmus_magnuspinnatus
ENSPKIG00000004416	edc3	100	69.531	ENSPEMG00000015260	Edc3	100	68.555	Peromyscus_maniculatus_bairdii
ENSPKIG00000004416	edc3	100	68.689	ENSPCIG00000006276	EDC3	70	67.710	Phascolarctos_cinereus
ENSPKIG00000004416	edc3	100	74.901	ENSPFOG00000012204	edc3	100	74.901	Poecilia_formosa
ENSPKIG00000004416	edc3	100	74.901	ENSPLAG00000014420	edc3	100	74.901	Poecilia_latipinna
ENSPKIG00000004416	edc3	100	74.901	ENSPMEG00000023289	edc3	100	74.901	Poecilia_mexicana
ENSPKIG00000004416	edc3	100	74.704	ENSPREG00000016022	edc3	100	74.704	Poecilia_reticulata
ENSPKIG00000004416	edc3	100	68.359	ENSPPYG00000006642	EDC3	100	67.383	Pongo_abelii
ENSPKIG00000004416	edc3	89	83.333	ENSPCAG00000002802	EDC3	88	83.333	Procavia_capensis
ENSPKIG00000004416	edc3	100	69.727	ENSPCOG00000013364	EDC3	100	68.750	Propithecus_coquereli
ENSPKIG00000004416	edc3	100	69.531	ENSPVAG00000014733	EDC3	100	68.555	Pteropus_vampyrus
ENSPKIG00000004416	edc3	99	62.648	ENSPNYG00000009669	EDC3	99	62.648	Pundamilia_nyererei
ENSPKIG00000004416	edc3	100	74.803	ENSPNYG00000021797	edc3	100	74.803	Pundamilia_nyererei
ENSPKIG00000004416	edc3	100	77.318	ENSPNAG00000019657	edc3	100	77.318	Pygocentrus_nattereri
ENSPKIG00000004416	edc3	99	70.334	ENSRNOG00000019579	Edc3	99	69.352	Rattus_norvegicus
ENSPKIG00000004416	edc3	100	69.727	ENSRBIG00000019488	EDC3	100	68.750	Rhinopithecus_bieti
ENSPKIG00000004416	edc3	100	69.727	ENSRROG00000034959	EDC3	100	68.750	Rhinopithecus_roxellana
ENSPKIG00000004416	edc3	100	69.531	ENSSBOG00000004896	EDC3	100	68.555	Saimiri_boliviensis_boliviensis
ENSPKIG00000004416	edc3	96	68.496	ENSSHAG00000015075	EDC3	95	67.480	Sarcophilus_harrisii
ENSPKIG00000004416	edc3	99	78.458	ENSSFOG00015016939	edc3	99	78.937	Scleropages_formosus
ENSPKIG00000004416	edc3	100	76.772	ENSSFOG00015002439	edc3	100	77.362	Scleropages_formosus
ENSPKIG00000004416	edc3	99	62.846	ENSSMAG00000010176	-	99	62.846	Scophthalmus_maximus
ENSPKIG00000004416	edc3	100	74.704	ENSSMAG00000010695	edc3	100	74.901	Scophthalmus_maximus
ENSPKIG00000004416	edc3	99	65.217	ENSSDUG00000007671	EDC3	99	65.217	Seriola_dumerili
ENSPKIG00000004416	edc3	100	75.494	ENSSDUG00000021844	edc3	100	75.692	Seriola_dumerili
ENSPKIG00000004416	edc3	100	75.296	ENSSLDG00000022046	edc3	100	75.494	Seriola_lalandi_dorsalis
ENSPKIG00000004416	edc3	80	81.452	ENSSARG00000003907	EDC3	80	81.452	Sorex_araneus
ENSPKIG00000004416	edc3	100	68.359	ENSSPUG00000008232	EDC3	100	67.383	Sphenodon_punctatus
ENSPKIG00000004416	edc3	99	62.157	ENSSPAG00000020327	EDC3	99	62.846	Stegastes_partitus
ENSPKIG00000004416	edc3	100	75.296	ENSSPAG00000010009	edc3	100	75.296	Stegastes_partitus
ENSPKIG00000004416	edc3	100	69.336	ENSSSCG00000001903	EDC3	100	68.359	Sus_scrofa
ENSPKIG00000004416	edc3	100	68.689	ENSTGUG00000004007	EDC3	100	67.515	Taeniopygia_guttata
ENSPKIG00000004416	edc3	100	76.087	ENSTRUG00000017078	edc3	100	76.087	Takifugu_rubripes
ENSPKIG00000004416	edc3	100	74.016	ENSTNIG00000016047	edc3	100	74.016	Tetraodon_nigroviridis
ENSPKIG00000004416	edc3	100	70.117	ENSTTRG00000007990	EDC3	100	69.141	Tursiops_truncatus
ENSPKIG00000004416	edc3	100	69.922	ENSUAMG00000026710	-	100	68.945	Ursus_americanus
ENSPKIG00000004416	edc3	100	69.922	ENSUMAG00000005006	EDC3	96	68.945	Ursus_maritimus
ENSPKIG00000004416	edc3	80	74.074	ENSVPAG00000003499	-	79	74.074	Vicugna_pacos
ENSPKIG00000004416	edc3	100	69.727	ENSVVUG00000018601	EDC3	100	68.750	Vulpes_vulpes
ENSPKIG00000004416	edc3	69	74.074	ENSXETG00000010622	edc3	99	74.929	Xenopus_tropicalis
ENSPKIG00000004416	edc3	100	74.308	ENSXMAG00000007377	edc3	100	74.308	Xiphophorus_maculatus