EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000004427 (Gene tree)
Gene ID: 111853786
Gene Symbol: polr3f
Alias: -
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 7491 bases
Position: chrPGUA01000261.1:865803-873293
Accession: 111853786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000019150	RNA_pol_Rpc34	PF05158.12	7.5e-101	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000035993	-	3488	-	ENSPKIP00000019150	314 (aa)	XP_023686855	UPI000CD6371D

Gene Model

Click here to download ENSPKIG00000004427's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03020	RNA polymerase	KEGG
pki04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000004427's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000004427	polr3f	100	88.291	ENSG00000132664	POLR3F	100	88.291	Homo_sapiens
ENSPKIG00000004427	polr3f	100	89.873	ENSAPOG00000008271	polr3f	100	89.873	Acanthochromis_polyacanthus
ENSPKIG00000004427	polr3f	100	87.975	ENSAMEG00000005222	POLR3F	100	87.975	Ailuropoda_melanoleuca
ENSPKIG00000004427	polr3f	100	85.032	ENSACIG00000006705	polr3f	100	85.032	Amphilophus_citrinellus
ENSPKIG00000004427	polr3f	100	90.190	ENSAOCG00000000687	polr3f	100	90.190	Amphiprion_ocellaris
ENSPKIG00000004427	polr3f	100	89.873	ENSAPEG00000015263	polr3f	100	89.873	Amphiprion_percula
ENSPKIG00000004427	polr3f	88	92.727	ENSATEG00000015539	polr3f	100	92.727	Anabas_testudineus
ENSPKIG00000004427	polr3f	88	90.545	ENSAPLG00000005533	POLR3F	100	90.545	Anas_platyrhynchos
ENSPKIG00000004427	polr3f	98	87.055	ENSACAG00000014293	POLR3F	99	87.055	Anolis_carolinensis
ENSPKIG00000004427	polr3f	100	88.608	ENSANAG00000026726	POLR3F	100	88.608	Aotus_nancymaae
ENSPKIG00000004427	polr3f	100	90.823	ENSACLG00000003615	polr3f	100	90.823	Astatotilapia_calliptera
ENSPKIG00000004427	polr3f	100	93.312	ENSAMXG00000036020	polr3f	100	93.312	Astyanax_mexicanus
ENSPKIG00000004427	polr3f	100	87.658	ENSBTAG00000008825	POLR3F	100	87.658	Bos_taurus
ENSPKIG00000004427	polr3f	98	33.117	WBGene00021112	W09C3.4	98	33.117	Caenorhabditis_elegans
ENSPKIG00000004427	polr3f	100	88.608	ENSCJAG00000005159	POLR3F	100	88.608	Callithrix_jacchus
ENSPKIG00000004427	polr3f	100	87.658	ENSCAFG00000005420	POLR3F	100	87.658	Canis_familiaris
ENSPKIG00000004427	polr3f	100	87.658	ENSCAFG00020027500	POLR3F	100	87.658	Canis_lupus_dingo
ENSPKIG00000004427	polr3f	100	87.658	ENSCHIG00000014743	POLR3F	100	87.658	Capra_hircus
ENSPKIG00000004427	polr3f	100	87.658	ENSTSYG00000004207	POLR3F	100	87.658	Carlito_syrichta
ENSPKIG00000004427	polr3f	94	47.973	ENSCAPG00000008423	POLR3F	100	47.973	Cavia_aperea
ENSPKIG00000004427	polr3f	100	87.658	ENSCPOG00000002400	POLR3F	100	87.658	Cavia_porcellus
ENSPKIG00000004427	polr3f	100	78.797	ENSCCAG00000021800	POLR3F	100	78.797	Cebus_capucinus
ENSPKIG00000004427	polr3f	100	87.975	ENSCATG00000019507	POLR3F	100	87.975	Cercocebus_atys
ENSPKIG00000004427	polr3f	100	87.975	ENSCLAG00000016296	POLR3F	100	87.975	Chinchilla_lanigera
ENSPKIG00000004427	polr3f	100	87.975	ENSCSAG00000011513	POLR3F	100	87.975	Chlorocebus_sabaeus
ENSPKIG00000004427	polr3f	73	87.640	ENSCHOG00000013268	POLR3F	73	87.640	Choloepus_hoffmanni
ENSPKIG00000004427	polr3f	88	89.455	ENSCPBG00000023473	POLR3F	100	89.455	Chrysemys_picta_bellii
ENSPKIG00000004427	polr3f	99	60.510	ENSCING00000001212	-	99	60.510	Ciona_intestinalis
ENSPKIG00000004427	polr3f	71	60.987	ENSCSAVG00000003340	-	96	64.497	Ciona_savignyi
ENSPKIG00000004427	polr3f	92	87.629	ENSCANG00000037390	POLR3F	100	87.629	Colobus_angolensis_palliatus
ENSPKIG00000004427	polr3f	100	87.342	ENSCGRG00001002032	Polr3f	100	87.342	Cricetulus_griseus_chok1gshd
ENSPKIG00000004427	polr3f	100	87.342	ENSCGRG00000010852	Polr3f	100	87.342	Cricetulus_griseus_crigri
ENSPKIG00000004427	polr3f	100	87.342	ENSCSEG00000001247	polr3f	100	87.342	Cynoglossus_semilaevis
ENSPKIG00000004427	polr3f	100	88.608	ENSCVAG00000007611	polr3f	100	88.608	Cyprinodon_variegatus
ENSPKIG00000004427	polr3f	100	93.949	ENSDARG00000012572	polr3f	100	93.949	Danio_rerio
ENSPKIG00000004427	polr3f	100	84.810	ENSDNOG00000010719	POLR3F	100	84.810	Dasypus_novemcinctus
ENSPKIG00000004427	polr3f	100	87.975	ENSDORG00000016352	Polr3f	100	87.975	Dipodomys_ordii
ENSPKIG00000004427	polr3f	91	51.736	FBgn0038951	CG5380	95	51.736	Drosophila_melanogaster
ENSPKIG00000004427	polr3f	89	52.330	ENSETEG00000015485	-	99	52.330	Echinops_telfairi
ENSPKIG00000004427	polr3f	100	75.478	ENSEBUG00000006783	polr3f	100	75.478	Eptatretus_burgeri
ENSPKIG00000004427	polr3f	100	88.291	ENSEASG00005002022	POLR3F	100	88.291	Equus_asinus_asinus
ENSPKIG00000004427	polr3f	100	88.291	ENSECAG00000009920	POLR3F	100	88.291	Equus_caballus
ENSPKIG00000004427	polr3f	80	84.000	ENSEEUG00000000184	POLR3F	80	84.000	Erinaceus_europaeus
ENSPKIG00000004427	polr3f	100	93.631	ENSELUG00000001558	polr3f	100	93.631	Esox_lucius
ENSPKIG00000004427	polr3f	100	87.975	ENSFCAG00000013828	POLR3F	100	87.975	Felis_catus
ENSPKIG00000004427	polr3f	88	91.636	ENSFALG00000007623	POLR3F	100	91.636	Ficedula_albicollis
ENSPKIG00000004427	polr3f	100	87.658	ENSFDAG00000002528	POLR3F	100	87.658	Fukomys_damarensis
ENSPKIG00000004427	polr3f	100	87.658	ENSFHEG00000006450	polr3f	100	87.658	Fundulus_heteroclitus
ENSPKIG00000004427	polr3f	100	90.446	ENSGALG00000008749	POLR3F	100	90.446	Gallus_gallus
ENSPKIG00000004427	polr3f	100	89.241	ENSGAFG00000003698	polr3f	100	89.241	Gambusia_affinis
ENSPKIG00000004427	polr3f	100	88.854	ENSGAGG00000006151	POLR3F	100	88.854	Gopherus_agassizii
ENSPKIG00000004427	polr3f	100	88.291	ENSGGOG00000011543	POLR3F	100	88.291	Gorilla_gorilla
ENSPKIG00000004427	polr3f	100	91.139	ENSHBUG00000013806	polr3f	100	91.139	Haplochromis_burtoni
ENSPKIG00000004427	polr3f	100	88.291	ENSHGLG00000011867	POLR3F	100	88.291	Heterocephalus_glaber_female
ENSPKIG00000004427	polr3f	100	88.291	ENSHGLG00100012577	POLR3F	100	88.291	Heterocephalus_glaber_male
ENSPKIG00000004427	polr3f	100	80.063	ENSHCOG00000011751	polr3f	100	80.063	Hippocampus_comes
ENSPKIG00000004427	polr3f	100	93.949	ENSIPUG00000013347	polr3f	100	93.949	Ictalurus_punctatus
ENSPKIG00000004427	polr3f	100	87.975	ENSSTOG00000013588	POLR3F	100	87.975	Ictidomys_tridecemlineatus
ENSPKIG00000004427	polr3f	100	87.342	ENSJJAG00000017513	Polr3f	100	87.342	Jaculus_jaculus
ENSPKIG00000004427	polr3f	88	82.909	ENSKMAG00000016495	polr3f	100	82.909	Kryptolebias_marmoratus
ENSPKIG00000004427	polr3f	74	93.966	ENSLBEG00000011998	polr3f	100	93.966	Labrus_bergylta
ENSPKIG00000004427	polr3f	100	90.446	ENSLACG00000009371	POLR3F	100	90.446	Latimeria_chalumnae
ENSPKIG00000004427	polr3f	100	94.904	ENSLOCG00000015701	polr3f	100	94.904	Lepisosteus_oculatus
ENSPKIG00000004427	polr3f	100	87.658	ENSLAFG00000004929	POLR3F	100	87.658	Loxodonta_africana
ENSPKIG00000004427	polr3f	100	87.975	ENSMFAG00000002227	POLR3F	100	87.975	Macaca_fascicularis
ENSPKIG00000004427	polr3f	88	89.818	ENSMMUG00000004143	POLR3F	100	89.818	Macaca_mulatta
ENSPKIG00000004427	polr3f	100	87.975	ENSMNEG00000033404	POLR3F	100	87.975	Macaca_nemestrina
ENSPKIG00000004427	polr3f	100	87.975	ENSMLEG00000021905	POLR3F	100	87.975	Mandrillus_leucophaeus
ENSPKIG00000004427	polr3f	100	89.557	ENSMAMG00000017975	polr3f	100	89.557	Mastacembelus_armatus
ENSPKIG00000004427	polr3f	100	90.823	ENSMZEG00005015134	polr3f	100	90.823	Maylandia_zebra
ENSPKIG00000004427	polr3f	100	90.764	ENSMGAG00000006691	POLR3F	100	90.764	Meleagris_gallopavo
ENSPKIG00000004427	polr3f	100	87.342	ENSMAUG00000020176	Polr3f	100	87.342	Mesocricetus_auratus
ENSPKIG00000004427	polr3f	100	88.608	ENSMICG00000044519	POLR3F	100	88.608	Microcebus_murinus
ENSPKIG00000004427	polr3f	100	87.658	ENSMOCG00000018352	Polr3f	100	87.658	Microtus_ochrogaster
ENSPKIG00000004427	polr3f	94	91.246	ENSMMOG00000018477	polr3f	100	91.246	Mola_mola
ENSPKIG00000004427	polr3f	100	87.975	ENSMODG00000005624	POLR3F	100	87.975	Monodelphis_domestica
ENSPKIG00000004427	polr3f	100	90.190	ENSMALG00000006685	polr3f	100	90.190	Monopterus_albus
ENSPKIG00000004427	polr3f	100	87.975	MGP_CAROLIEiJ_G0024385	Polr3f	100	87.975	Mus_caroli
ENSPKIG00000004427	polr3f	100	87.975	ENSMUSG00000027427	Polr3f	100	87.975	Mus_musculus
ENSPKIG00000004427	polr3f	100	87.975	MGP_PahariEiJ_G0025829	Polr3f	100	87.975	Mus_pahari
ENSPKIG00000004427	polr3f	100	87.975	MGP_SPRETEiJ_G0025304	Polr3f	100	87.975	Mus_spretus
ENSPKIG00000004427	polr3f	100	67.385	ENSMPUG00000001252	-	100	67.385	Mustela_putorius_furo
ENSPKIG00000004427	polr3f	100	87.975	ENSMLUG00000014844	POLR3F	100	87.975	Myotis_lucifugus
ENSPKIG00000004427	polr3f	100	86.709	ENSNGAG00000010898	Polr3f	100	86.709	Nannospalax_galili
ENSPKIG00000004427	polr3f	100	91.456	ENSNBRG00000020796	polr3f	100	91.456	Neolamprologus_brichardi
ENSPKIG00000004427	polr3f	100	88.291	ENSNLEG00000009778	POLR3F	100	88.291	Nomascus_leucogenys
ENSPKIG00000004427	polr3f	94	83.051	ENSMEUG00000010320	POLR3F	100	83.051	Notamacropus_eugenii
ENSPKIG00000004427	polr3f	100	87.025	ENSOPRG00000003385	POLR3F	100	87.025	Ochotona_princeps
ENSPKIG00000004427	polr3f	100	88.291	ENSODEG00000011521	POLR3F	100	88.291	Octodon_degus
ENSPKIG00000004427	polr3f	100	89.557	ENSONIG00000006858	polr3f	100	89.557	Oreochromis_niloticus
ENSPKIG00000004427	polr3f	100	88.291	ENSOANG00000001253	POLR3F	100	88.291	Ornithorhynchus_anatinus
ENSPKIG00000004427	polr3f	100	87.975	ENSOCUG00000015067	POLR3F	100	87.975	Oryctolagus_cuniculus
ENSPKIG00000004427	polr3f	100	86.709	ENSORLG00000022412	polr3f	100	86.709	Oryzias_latipes
ENSPKIG00000004427	polr3f	100	86.709	ENSORLG00020021944	polr3f	100	86.709	Oryzias_latipes_hni
ENSPKIG00000004427	polr3f	100	87.658	ENSOGAG00000002916	POLR3F	100	87.658	Otolemur_garnettii
ENSPKIG00000004427	polr3f	100	87.658	ENSOARG00000000315	-	100	87.658	Ovis_aries
ENSPKIG00000004427	polr3f	100	53.481	ENSOARG00000008647	-	100	53.481	Ovis_aries
ENSPKIG00000004427	polr3f	100	88.291	ENSPPAG00000036681	POLR3F	100	88.291	Pan_paniscus
ENSPKIG00000004427	polr3f	100	87.975	ENSPPRG00000024604	POLR3F	100	87.975	Panthera_pardus
ENSPKIG00000004427	polr3f	100	87.975	ENSPTIG00000020292	POLR3F	100	87.975	Panthera_tigris_altaica
ENSPKIG00000004427	polr3f	100	88.291	ENSPTRG00000013287	POLR3F	100	88.291	Pan_troglodytes
ENSPKIG00000004427	polr3f	100	87.975	ENSPANG00000025015	POLR3F	100	87.975	Papio_anubis
ENSPKIG00000004427	polr3f	88	90.545	ENSPSIG00000016613	POLR3F	100	90.545	Pelodiscus_sinensis
ENSPKIG00000004427	polr3f	100	55.486	ENSPMGG00000018350	polr3f	100	58.861	Periophthalmus_magnuspinnatus
ENSPKIG00000004427	polr3f	100	87.975	ENSPEMG00000006966	Polr3f	100	87.975	Peromyscus_maniculatus_bairdii
ENSPKIG00000004427	polr3f	100	80.892	ENSPMAG00000005530	polr3f	100	80.892	Petromyzon_marinus
ENSPKIG00000004427	polr3f	100	87.658	ENSPCIG00000000908	POLR3F	85	87.658	Phascolarctos_cinereus
ENSPKIG00000004427	polr3f	100	89.241	ENSPFOG00000018334	polr3f	100	89.241	Poecilia_formosa
ENSPKIG00000004427	polr3f	100	89.241	ENSPLAG00000021803	polr3f	100	89.241	Poecilia_latipinna
ENSPKIG00000004427	polr3f	100	89.241	ENSPMEG00000013150	polr3f	100	89.241	Poecilia_mexicana
ENSPKIG00000004427	polr3f	100	89.241	ENSPREG00000005278	polr3f	100	89.241	Poecilia_reticulata
ENSPKIG00000004427	polr3f	100	88.291	ENSPPYG00000010737	POLR3F	100	88.291	Pongo_abelii
ENSPKIG00000004427	polr3f	66	88.514	ENSPCAG00000004893	POLR3F	71	88.514	Procavia_capensis
ENSPKIG00000004427	polr3f	100	88.608	ENSPCOG00000004543	POLR3F	100	88.608	Propithecus_coquereli
ENSPKIG00000004427	polr3f	100	87.975	ENSPVAG00000000403	POLR3F	100	87.975	Pteropus_vampyrus
ENSPKIG00000004427	polr3f	100	91.139	ENSPNYG00000016276	polr3f	100	91.139	Pundamilia_nyererei
ENSPKIG00000004427	polr3f	100	94.904	ENSPNAG00000005164	polr3f	100	94.904	Pygocentrus_nattereri
ENSPKIG00000004427	polr3f	100	87.975	ENSRNOG00000007548	Polr3f	85	87.975	Rattus_norvegicus
ENSPKIG00000004427	polr3f	100	87.975	ENSRBIG00000021268	POLR3F	100	87.975	Rhinopithecus_bieti
ENSPKIG00000004427	polr3f	100	87.975	ENSRROG00000039911	POLR3F	100	87.975	Rhinopithecus_roxellana
ENSPKIG00000004427	polr3f	100	88.608	ENSSBOG00000018207	POLR3F	100	88.608	Saimiri_boliviensis_boliviensis
ENSPKIG00000004427	polr3f	100	69.782	ENSSHAG00000018160	POLR3F	100	70.347	Sarcophilus_harrisii
ENSPKIG00000004427	polr3f	100	95.541	ENSSFOG00015022433	polr3f	100	95.541	Scleropages_formosus
ENSPKIG00000004427	polr3f	100	87.658	ENSSMAG00000021029	polr3f	100	87.658	Scophthalmus_maximus
ENSPKIG00000004427	polr3f	100	80.063	ENSSDUG00000022435	polr3f	100	80.063	Seriola_dumerili
ENSPKIG00000004427	polr3f	100	90.823	ENSSLDG00000012761	polr3f	100	90.823	Seriola_lalandi_dorsalis
ENSPKIG00000004427	polr3f	100	79.430	ENSSARG00000006039	POLR3F	100	79.430	Sorex_araneus
ENSPKIG00000004427	polr3f	100	88.217	ENSSPUG00000001873	POLR3F	100	88.217	Sphenodon_punctatus
ENSPKIG00000004427	polr3f	100	82.278	ENSSPAG00000002092	polr3f	100	82.278	Stegastes_partitus
ENSPKIG00000004427	polr3f	100	88.291	ENSSSCG00000007095	POLR3F	100	92.672	Sus_scrofa
ENSPKIG00000004427	polr3f	100	90.446	ENSTGUG00000005839	POLR3F	100	90.446	Taeniopygia_guttata
ENSPKIG00000004427	polr3f	100	88.291	ENSTRUG00000012101	polr3f	100	88.291	Takifugu_rubripes
ENSPKIG00000004427	polr3f	100	86.709	ENSTNIG00000006456	polr3f	100	86.709	Tetraodon_nigroviridis
ENSPKIG00000004427	polr3f	100	72.152	ENSTBEG00000007921	POLR3F	100	72.152	Tupaia_belangeri
ENSPKIG00000004427	polr3f	100	87.658	ENSTTRG00000002580	POLR3F	100	87.658	Tursiops_truncatus
ENSPKIG00000004427	polr3f	53	88.554	ENSUAMG00000024166	POLR3F	100	88.554	Ursus_americanus
ENSPKIG00000004427	polr3f	100	87.658	ENSUMAG00000024944	POLR3F	100	87.658	Ursus_maritimus
ENSPKIG00000004427	polr3f	100	87.025	ENSVPAG00000009063	POLR3F	100	87.025	Vicugna_pacos
ENSPKIG00000004427	polr3f	100	87.658	ENSVVUG00000012925	POLR3F	100	87.658	Vulpes_vulpes
ENSPKIG00000004427	polr3f	100	88.217	ENSXETG00000024898	polr3f	100	88.217	Xenopus_tropicalis
ENSPKIG00000004427	polr3f	88	90.909	ENSXCOG00000010301	polr3f	100	90.909	Xiphophorus_couchianus
ENSPKIG00000004427	polr3f	100	88.924	ENSXMAG00000004604	polr3f	100	88.924	Xiphophorus_maculatus