EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000004511 (Gene tree)
Gene ID: 111848204
Gene Symbol: LARP6 (1 of many)
Alias: -
Full Name: la-related protein 6-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 3779 bases
Position: chrPGUA01000179.1:472992-476770
Accession: 111848204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000019277	La	PF05383.17	3.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000036123	LARP6 (1 of many)-201	2004	-	ENSPKIP00000019277	667 (aa)	XP_023675792	UPI000CD5E364

Gene Model

Click here to download ENSPKIG00000004511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000004511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000004511	LARP6	100	62.321	ENSPKIG00000020103	larp6a	90	73.750
ENSPKIG00000004511	LARP6	62	41.218	ENSPKIG00000025605	larp6b	84	40.898

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000004511	LARP6	65	58.222	ENSG00000166173	LARP6	96	56.619	Homo_sapiens
ENSPKIG00000004511	LARP6	100	65.616	ENSAPOG00000021773	larp6a	100	65.473	Acanthochromis_polyacanthus
ENSPKIG00000004511	LARP6	65	57.848	ENSAMEG00000008897	LARP6	99	57.848	Ailuropoda_melanoleuca
ENSPKIG00000004511	LARP6	75	77.246	ENSACIG00000005166	larp6a	98	77.246	Amphilophus_citrinellus
ENSPKIG00000004511	LARP6	100	65.007	ENSAOCG00000002284	larp6a	100	64.957	Amphiprion_ocellaris
ENSPKIG00000004511	LARP6	75	76.647	ENSAPEG00000008077	larp6a	96	76.647	Amphiprion_percula
ENSPKIG00000004511	LARP6	100	64.397	ENSATEG00000004018	larp6a	100	64.448	Anabas_testudineus
ENSPKIG00000004511	LARP6	64	58.784	ENSAPLG00000009914	LARP6	99	58.784	Anas_platyrhynchos
ENSPKIG00000004511	LARP6	63	59.251	ENSACAG00000008613	LARP6	97	58.782	Anolis_carolinensis
ENSPKIG00000004511	LARP6	65	58.444	ENSANAG00000024860	LARP6	96	56.823	Aotus_nancymaae
ENSPKIG00000004511	LARP6	100	64.448	ENSACLG00000018561	larp6a	97	64.807	Astatotilapia_calliptera
ENSPKIG00000004511	LARP6	63	39.726	ENSAMXG00000036816	-	94	40.046	Astyanax_mexicanus
ENSPKIG00000004511	LARP6	83	71.004	ENSAMXG00000029387	larp6a	78	70.795	Astyanax_mexicanus
ENSPKIG00000004511	LARP6	67	58.261	ENSBTAG00000003915	LARP6	95	57.434	Bos_taurus
ENSPKIG00000004511	LARP6	67	57.609	ENSCJAG00000018642	-	97	56.088	Callithrix_jacchus
ENSPKIG00000004511	LARP6	71	55.489	ENSCJAG00000046236	-	97	55.489	Callithrix_jacchus
ENSPKIG00000004511	LARP6	65	59.101	ENSCAFG00000017616	LARP6	99	59.101	Canis_familiaris
ENSPKIG00000004511	LARP6	72	56.287	ENSCAFG00020007296	LARP6	98	56.687	Canis_lupus_dingo
ENSPKIG00000004511	LARP6	67	57.826	ENSCHIG00000013742	LARP6	95	57.026	Capra_hircus
ENSPKIG00000004511	LARP6	65	57.978	ENSTSYG00000028124	LARP6	86	57.978	Carlito_syrichta
ENSPKIG00000004511	LARP6	64	57.562	ENSCAPG00000015452	LARP6	99	57.562	Cavia_aperea
ENSPKIG00000004511	LARP6	71	55.400	ENSCPOG00000022687	LARP6	96	55.400	Cavia_porcellus
ENSPKIG00000004511	LARP6	70	55.804	ENSCCAG00000036320	LARP6	96	56.415	Cebus_capucinus
ENSPKIG00000004511	LARP6	65	58.222	ENSCATG00000042432	LARP6	96	56.619	Cercocebus_atys
ENSPKIG00000004511	LARP6	67	57.609	ENSCLAG00000007893	LARP6	96	55.711	Chinchilla_lanigera
ENSPKIG00000004511	LARP6	65	58.222	ENSCSAG00000013672	LARP6	96	56.619	Chlorocebus_sabaeus
ENSPKIG00000004511	LARP6	67	57.734	ENSCHOG00000003318	LARP6	98	56.646	Choloepus_hoffmanni
ENSPKIG00000004511	LARP6	70	60.759	ENSCPBG00000010771	LARP6	88	60.759	Chrysemys_picta_bellii
ENSPKIG00000004511	LARP6	63	58.851	ENSCANG00000025833	LARP6	98	58.851	Colobus_angolensis_palliatus
ENSPKIG00000004511	LARP6	67	57.759	ENSCGRG00001024472	Larp6	97	56.040	Cricetulus_griseus_chok1gshd
ENSPKIG00000004511	LARP6	67	57.759	ENSCGRG00000004527	Larp6	97	56.040	Cricetulus_griseus_crigri
ENSPKIG00000004511	LARP6	88	67.710	ENSCSEG00000011196	larp6a	89	68.272	Cynoglossus_semilaevis
ENSPKIG00000004511	LARP6	100	62.034	ENSCVAG00000009605	larp6a	100	63.610	Cyprinodon_variegatus
ENSPKIG00000004511	LARP6	73	75.610	ENSDARG00000005355	larp6a	99	79.043	Danio_rerio
ENSPKIG00000004511	LARP6	67	57.391	ENSDNOG00000042993	LARP6	97	55.936	Dasypus_novemcinctus
ENSPKIG00000004511	LARP6	72	52.174	ENSDORG00000023910	Larp6	97	54.167	Dipodomys_ordii
ENSPKIG00000004511	LARP6	52	58.590	ENSETEG00000020390	LARP6	76	57.198	Echinops_telfairi
ENSPKIG00000004511	LARP6	67	58.913	ENSEASG00005005490	LARP6	70	57.841	Equus_asinus_asinus
ENSPKIG00000004511	LARP6	67	58.913	ENSECAG00000014190	LARP6	96	58.901	Equus_caballus
ENSPKIG00000004511	LARP6	100	68.307	ENSELUG00000007341	larp6a	100	68.307	Esox_lucius
ENSPKIG00000004511	LARP6	67	58.043	ENSFCAG00000001361	LARP6	97	56.713	Felis_catus
ENSPKIG00000004511	LARP6	67	59.348	ENSFALG00000012389	LARP6	99	56.970	Ficedula_albicollis
ENSPKIG00000004511	LARP6	65	58.072	ENSFDAG00000019994	LARP6	83	58.072	Fukomys_damarensis
ENSPKIG00000004511	LARP6	100	63.037	ENSFHEG00000010312	larp6a	100	63.467	Fundulus_heteroclitus
ENSPKIG00000004511	LARP6	67	59.913	ENSGALG00000004046	LARP6	94	58.078	Gallus_gallus
ENSPKIG00000004511	LARP6	100	62.607	ENSGAFG00000009426	larp6a	100	62.464	Gambusia_affinis
ENSPKIG00000004511	LARP6	65	79.215	ENSGACG00000014622	larp6a	99	79.215	Gasterosteus_aculeatus
ENSPKIG00000004511	LARP6	60	60.775	ENSGAGG00000010802	LARP6	62	58.864	Gopherus_agassizii
ENSPKIG00000004511	LARP6	63	58.851	ENSGGOG00000024151	LARP6	98	58.851	Gorilla_gorilla
ENSPKIG00000004511	LARP6	100	64.448	ENSHBUG00000021014	larp6a	97	64.807	Haplochromis_burtoni
ENSPKIG00000004511	LARP6	67	58.043	ENSHGLG00000015112	LARP6	96	56.112	Heterocephalus_glaber_female
ENSPKIG00000004511	LARP6	65	58.652	ENSHGLG00100013159	LARP6	99	58.652	Heterocephalus_glaber_male
ENSPKIG00000004511	LARP6	74	75.100	ENSHCOG00000001241	larp6a	95	75.100	Hippocampus_comes
ENSPKIG00000004511	LARP6	100	60.637	ENSIPUG00000010187	larp6	74	75.000	Ictalurus_punctatus
ENSPKIG00000004511	LARP6	63	36.557	ENSIPUG00000002828	-	94	38.480	Ictalurus_punctatus
ENSPKIG00000004511	LARP6	67	57.826	ENSSTOG00000024279	LARP6	95	57.826	Ictidomys_tridecemlineatus
ENSPKIG00000004511	LARP6	67	56.087	ENSJJAG00000011013	Larp6	97	54.200	Jaculus_jaculus
ENSPKIG00000004511	LARP6	75	75.050	ENSLBEG00000000170	larp6a	96	75.050	Labrus_bergylta
ENSPKIG00000004511	LARP6	70	62.578	ENSLACG00000018706	LARP6	89	64.241	Latimeria_chalumnae
ENSPKIG00000004511	LARP6	62	40.402	ENSLACG00000002786	-	95	46.262	Latimeria_chalumnae
ENSPKIG00000004511	LARP6	62	43.692	ENSLOCG00000008547	-	80	43.823	Lepisosteus_oculatus
ENSPKIG00000004511	LARP6	100	63.690	ENSLOCG00000014592	larp6a	100	63.690	Lepisosteus_oculatus
ENSPKIG00000004511	LARP6	67	58.913	ENSLAFG00000016343	LARP6	99	57.996	Loxodonta_africana
ENSPKIG00000004511	LARP6	65	58.222	ENSMFAG00000035507	LARP6	95	58.222	Macaca_fascicularis
ENSPKIG00000004511	LARP6	65	58.222	ENSMMUG00000004429	LARP6	96	57.173	Macaca_mulatta
ENSPKIG00000004511	LARP6	65	58.222	ENSMNEG00000045335	LARP6	96	56.619	Macaca_nemestrina
ENSPKIG00000004511	LARP6	63	58.851	ENSMLEG00000038587	LARP6	98	58.851	Mandrillus_leucophaeus
ENSPKIG00000004511	LARP6	100	65.057	ENSMAMG00000005261	larp6a	100	65.335	Mastacembelus_armatus
ENSPKIG00000004511	LARP6	100	64.589	ENSMZEG00005005774	larp6a	97	64.950	Maylandia_zebra
ENSPKIG00000004511	LARP6	64	58.957	ENSMGAG00000005077	LARP6	99	60.998	Meleagris_gallopavo
ENSPKIG00000004511	LARP6	67	57.609	ENSMAUG00000018486	Larp6	97	55.888	Mesocricetus_auratus
ENSPKIG00000004511	LARP6	67	57.174	ENSMICG00000011234	LARP6	95	55.215	Microcebus_murinus
ENSPKIG00000004511	LARP6	67	57.792	ENSMOCG00000010492	Larp6	97	56.487	Microtus_ochrogaster
ENSPKIG00000004511	LARP6	75	75.703	ENSMMOG00000016284	larp6a	97	75.703	Mola_mola
ENSPKIG00000004511	LARP6	66	54.945	ENSMODG00000009034	LARP6	96	50.096	Monodelphis_domestica
ENSPKIG00000004511	LARP6	74	76.008	ENSMALG00000014439	larp6a	95	76.008	Monopterus_albus
ENSPKIG00000004511	LARP6	71	55.489	MGP_CAROLIEiJ_G0032314	Larp6	97	56.487	Mus_caroli
ENSPKIG00000004511	LARP6	67	56.957	ENSMUSG00000034839	Larp6	97	56.287	Mus_musculus
ENSPKIG00000004511	LARP6	67	58.043	MGP_PahariEiJ_G0015180	Larp6	97	56.287	Mus_pahari
ENSPKIG00000004511	LARP6	67	57.174	MGP_SPRETEiJ_G0033452	Larp6	97	56.487	Mus_spretus
ENSPKIG00000004511	LARP6	65	58.744	ENSMPUG00000017086	LARP6	99	58.744	Mustela_putorius_furo
ENSPKIG00000004511	LARP6	68	57.569	ENSMLUG00000010319	LARP6	97	56.487	Myotis_lucifugus
ENSPKIG00000004511	LARP6	67	58.043	ENSNGAG00000014238	Larp6	97	56.175	Nannospalax_galili
ENSPKIG00000004511	LARP6	78	75.483	ENSNBRG00000008120	larp6a	99	75.483	Neolamprologus_brichardi
ENSPKIG00000004511	LARP6	65	58.222	ENSNLEG00000013691	LARP6	96	56.735	Nomascus_leucogenys
ENSPKIG00000004511	LARP6	55	61.017	ENSMEUG00000002270	LARP6	76	64.179	Notamacropus_eugenii
ENSPKIG00000004511	LARP6	54	53.514	ENSOPRG00000004868	-	99	53.784	Ochotona_princeps
ENSPKIG00000004511	LARP6	65	58.520	ENSODEG00000015958	LARP6	95	56.495	Octodon_degus
ENSPKIG00000004511	LARP6	75	77.154	ENSONIG00000002901	larp6a	96	77.154	Oreochromis_niloticus
ENSPKIG00000004511	LARP6	62	58.057	ENSOCUG00000009306	LARP6	97	57.477	Oryctolagus_cuniculus
ENSPKIG00000004511	LARP6	73	76.337	ENSORLG00000014256	larp6a	95	76.812	Oryzias_latipes
ENSPKIG00000004511	LARP6	100	64.460	ENSORLG00020019657	larp6a	100	64.173	Oryzias_latipes_hni
ENSPKIG00000004511	LARP6	100	64.604	ENSORLG00015017915	larp6a	100	64.317	Oryzias_latipes_hsok
ENSPKIG00000004511	LARP6	100	63.897	ENSOMEG00000017049	larp6a	100	63.467	Oryzias_melastigma
ENSPKIG00000004511	LARP6	71	55.556	ENSOGAG00000000522	LARP6	97	56.539	Otolemur_garnettii
ENSPKIG00000004511	LARP6	65	58.296	ENSOARG00000018750	LARP6	98	58.296	Ovis_aries
ENSPKIG00000004511	LARP6	63	58.851	ENSPPAG00000031247	LARP6	98	58.851	Pan_paniscus
ENSPKIG00000004511	LARP6	67	57.826	ENSPPRG00000011282	LARP6	97	56.513	Panthera_pardus
ENSPKIG00000004511	LARP6	65	58.652	ENSPTIG00000015318	LARP6	86	58.652	Panthera_tigris_altaica
ENSPKIG00000004511	LARP6	65	58.222	ENSPTRG00000007234	LARP6	96	56.619	Pan_troglodytes
ENSPKIG00000004511	LARP6	65	58.222	ENSPANG00000016362	LARP6	96	56.619	Papio_anubis
ENSPKIG00000004511	LARP6	75	76.459	ENSPMGG00000006958	larp6a	98	76.923	Periophthalmus_magnuspinnatus
ENSPKIG00000004511	LARP6	71	55.644	ENSPEMG00000012909	Larp6	97	55.644	Peromyscus_maniculatus_bairdii
ENSPKIG00000004511	LARP6	66	55.482	ENSPCIG00000020765	LARP6	93	52.096	Phascolarctos_cinereus
ENSPKIG00000004511	LARP6	75	76.152	ENSPFOG00000014175	larp6a	96	76.152	Poecilia_formosa
ENSPKIG00000004511	LARP6	100	62.553	ENSPLAG00000011105	larp6a	100	62.748	Poecilia_latipinna
ENSPKIG00000004511	LARP6	100	62.979	ENSPMEG00000011085	larp6a	100	63.181	Poecilia_mexicana
ENSPKIG00000004511	LARP6	100	63.143	ENSPREG00000008067	larp6a	100	63.248	Poecilia_reticulata
ENSPKIG00000004511	LARP6	65	58.222	ENSPPYG00000006604	LARP6	96	56.415	Pongo_abelii
ENSPKIG00000004511	LARP6	67	56.957	ENSPCOG00000022934	LARP6	95	56.033	Propithecus_coquereli
ENSPKIG00000004511	LARP6	67	57.826	ENSPVAG00000005618	LARP6	97	56.487	Pteropus_vampyrus
ENSPKIG00000004511	LARP6	78	75.869	ENSPNYG00000009835	larp6a	99	75.869	Pundamilia_nyererei
ENSPKIG00000004511	LARP6	73	75.152	ENSPNAG00000017966	larp6a	80	75.152	Pygocentrus_nattereri
ENSPKIG00000004511	LARP6	67	58.351	ENSRNOG00000012438	Larp6	97	56.375	Rattus_norvegicus
ENSPKIG00000004511	LARP6	69	56.092	ENSRBIG00000032902	LARP6	93	56.092	Rhinopithecus_bieti
ENSPKIG00000004511	LARP6	67	57.298	ENSRROG00000043074	LARP6	96	56.415	Rhinopithecus_roxellana
ENSPKIG00000004511	LARP6	63	59.080	ENSSBOG00000024190	LARP6	98	59.080	Saimiri_boliviensis_boliviensis
ENSPKIG00000004511	LARP6	64	55.856	ENSSHAG00000018495	LARP6	99	54.955	Sarcophilus_harrisii
ENSPKIG00000004511	LARP6	73	70.697	ENSSFOG00015002254	LARP6	95	70.968	Scleropages_formosus
ENSPKIG00000004511	LARP6	73	72.358	ENSSFOG00015023268	larp6a	94	72.764	Scleropages_formosus
ENSPKIG00000004511	LARP6	100	63.286	ENSSMAG00000009953	larp6a	100	63.025	Scophthalmus_maximus
ENSPKIG00000004511	LARP6	100	64.979	ENSSDUG00000007438	larp6a	100	65.120	Seriola_dumerili
ENSPKIG00000004511	LARP6	100	65.021	ENSSLDG00000016647	larp6a	100	65.162	Seriola_lalandi_dorsalis
ENSPKIG00000004511	LARP6	63	61.538	ENSSPUG00000011312	LARP6	97	61.305	Sphenodon_punctatus
ENSPKIG00000004511	LARP6	100	65.522	ENSSPAG00000020502	larp6a	100	65.379	Stegastes_partitus
ENSPKIG00000004511	LARP6	67	58.261	ENSSSCG00000004974	LARP6	95	57.434	Sus_scrofa
ENSPKIG00000004511	LARP6	63	59.954	ENSTGUG00000005808	LARP6	98	59.954	Taeniopygia_guttata
ENSPKIG00000004511	LARP6	100	62.139	ENSTRUG00000003151	larp6a	100	62.445	Takifugu_rubripes
ENSPKIG00000004511	LARP6	74	71.487	ENSTNIG00000011926	larp6a	99	71.690	Tetraodon_nigroviridis
ENSPKIG00000004511	LARP6	64	57.238	ENSTBEG00000015077	LARP6	99	57.366	Tupaia_belangeri
ENSPKIG00000004511	LARP6	65	57.906	ENSUAMG00000010467	LARP6	85	57.906	Ursus_americanus
ENSPKIG00000004511	LARP6	67	57.082	ENSVVUG00000015227	LARP6	99	57.082	Vulpes_vulpes
ENSPKIG00000004511	LARP6	70	58.921	ENSXETG00000020340	larp6	93	57.841	Xenopus_tropicalis
ENSPKIG00000004511	LARP6	72	76.398	ENSXCOG00000012654	larp6a	98	76.398	Xiphophorus_couchianus
ENSPKIG00000004511	LARP6	100	61.952	ENSXMAG00000021015	larp6a	96	62.536	Xiphophorus_maculatus