EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000004640 (Gene tree)
Gene ID: 111836516
Gene Symbol: trmt12
Alias: -
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 15296 bases
Position: chrPGUA01000569.1:33213-48508
Accession: 111836516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000019494	MTS	PF05175.14	1e-05	1	1
ENSPKIP00000019515	MTS	PF05175.14	1e-05	1	1
ENSPKIP00000019494	Met_10	PF02475.16	8.2e-31	1	1
ENSPKIP00000019515	Met_10	PF02475.16	8.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000000110	-	6053	-	ENSPKIP00000019515	405 (aa)	XP_023653623	UPI000CD64EB0
ENSPKIT00000000089	-	1185	-	ENSPKIP00000019494	394 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000004640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000004640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000004640	trmt12	99	53.222	ENSG00000183665	TRMT12	93	53.444	Homo_sapiens
ENSPKIG00000004640	trmt12	99	60.396	ENSAPOG00000011979	trmt12	99	60.396	Acanthochromis_polyacanthus
ENSPKIG00000004640	trmt12	99	55.314	ENSAMEG00000019612	TRMT12	95	54.930	Ailuropoda_melanoleuca
ENSPKIG00000004640	trmt12	97	59.635	ENSACIG00000012982	trmt12	99	59.635	Amphilophus_citrinellus
ENSPKIG00000004640	trmt12	99	60.149	ENSAOCG00000020570	trmt12	99	61.518	Amphiprion_ocellaris
ENSPKIG00000004640	trmt12	99	60.396	ENSAPEG00000006335	trmt12	99	61.780	Amphiprion_percula
ENSPKIG00000004640	trmt12	99	62.564	ENSATEG00000018316	trmt12	99	62.376	Anabas_testudineus
ENSPKIG00000004640	trmt12	99	61.538	ENSACLG00000001008	trmt12	99	61.139	Astatotilapia_calliptera
ENSPKIG00000004640	trmt12	99	58.531	ENSAMXG00000040366	trmt12	99	58.531	Astyanax_mexicanus
ENSPKIG00000004640	trmt12	99	55.690	ENSBTAG00000020398	TRMT12	92	55.294	Bos_taurus
ENSPKIG00000004640	trmt12	59	38.793	WBGene00009586	F40F9.10	50	38.793	Caenorhabditis_elegans
ENSPKIG00000004640	trmt12	99	52.899	ENSCJAG00000022174	TRMT12	95	52.582	Callithrix_jacchus
ENSPKIG00000004640	trmt12	99	56.039	ENSCAFG00000001040	TRMT12	97	55.634	Canis_familiaris
ENSPKIG00000004640	trmt12	99	56.039	ENSCAFG00020006500	TRMT12	97	55.634	Canis_lupus_dingo
ENSPKIG00000004640	trmt12	99	56.174	ENSCHIG00000016574	TRMT12	96	55.924	Capra_hircus
ENSPKIG00000004640	trmt12	99	55.718	ENSCPOG00000026520	TRMT12	96	55.556	Cavia_porcellus
ENSPKIG00000004640	trmt12	99	55.072	ENSCSAG00000018615	TRMT12	95	54.695	Chlorocebus_sabaeus
ENSPKIG00000004640	trmt12	99	55.896	ENSCPBG00000014290	TRMT12	93	55.972	Chrysemys_picta_bellii
ENSPKIG00000004640	trmt12	73	48.805	ENSCING00000019633	-	97	48.805	Ciona_intestinalis
ENSPKIG00000004640	trmt12	76	47.333	ENSCSAVG00000000415	-	100	45.522	Ciona_savignyi
ENSPKIG00000004640	trmt12	99	53.285	ENSCGRG00001014834	Trmt12	97	53.155	Cricetulus_griseus_chok1gshd
ENSPKIG00000004640	trmt12	98	59.694	ENSCSEG00000002675	trmt12	95	58.578	Cynoglossus_semilaevis
ENSPKIG00000004640	trmt12	98	59.591	ENSCVAG00000005590	trmt12	99	58.477	Cyprinodon_variegatus
ENSPKIG00000004640	trmt12	99	59.559	ENSDARG00000060338	trmt12	99	61.566	Danio_rerio
ENSPKIG00000004640	trmt12	99	52.885	ENSETEG00000009373	TRMT12	95	52.000	Echinops_telfairi
ENSPKIG00000004640	trmt12	99	54.589	ENSEASG00005022441	TRMT12	97	54.225	Equus_asinus_asinus
ENSPKIG00000004640	trmt12	99	52.955	ENSEEUG00000004844	TRMT12	95	52.955	Erinaceus_europaeus
ENSPKIG00000004640	trmt12	99	60.099	ENSELUG00000004240	trmt12	99	61.765	Esox_lucius
ENSPKIG00000004640	trmt12	67	63.604	ENSFALG00000003825	TRMT12	98	67.290	Ficedula_albicollis
ENSPKIG00000004640	trmt12	99	54.087	ENSFDAG00000016647	TRMT12	97	53.738	Fukomys_damarensis
ENSPKIG00000004640	trmt12	96	52.880	ENSFHEG00000017338	trmt12	97	52.880	Fundulus_heteroclitus
ENSPKIG00000004640	trmt12	94	57.653	ENSGALG00000006773	TRMT12	92	54.824	Gallus_gallus
ENSPKIG00000004640	trmt12	99	58.128	ENSGAFG00000020056	trmt12	99	58.128	Gambusia_affinis
ENSPKIG00000004640	trmt12	96	61.082	ENSGACG00000017351	trmt12	100	61.082	Gasterosteus_aculeatus
ENSPKIG00000004640	trmt12	98	54.654	ENSGAGG00000006032	TRMT12	95	54.717	Gopherus_agassizii
ENSPKIG00000004640	trmt12	99	60.769	ENSHBUG00000016412	trmt12	99	60.396	Haplochromis_burtoni
ENSPKIG00000004640	trmt12	99	54.106	ENSHGLG00000020498	TRMT12	97	53.756	Heterocephalus_glaber_female
ENSPKIG00000004640	trmt12	99	54.940	ENSHGLG00100020132	TRMT12	97	53.828	Heterocephalus_glaber_male
ENSPKIG00000004640	trmt12	99	57.841	ENSHCOG00000005050	trmt12	94	63.804	Hippocampus_comes
ENSPKIG00000004640	trmt12	99	58.293	ENSIPUG00000018011	trmt12	92	58.293	Ictalurus_punctatus
ENSPKIG00000004640	trmt12	99	54.964	ENSSTOG00000030617	TRMT12	96	54.824	Ictidomys_tridecemlineatus
ENSPKIG00000004640	trmt12	99	59.852	ENSKMAG00000000891	trmt12	99	59.852	Kryptolebias_marmoratus
ENSPKIG00000004640	trmt12	99	57.398	ENSLBEG00000028712	trmt12	99	56.757	Labrus_bergylta
ENSPKIG00000004640	trmt12	55	71.296	ENSLBEG00000017456	-	88	71.296	Labrus_bergylta
ENSPKIG00000004640	trmt12	99	54.460	ENSLACG00000015869	TRMT12	95	54.460	Latimeria_chalumnae
ENSPKIG00000004640	trmt12	99	60.494	ENSLOCG00000015290	trmt12	99	60.494	Lepisosteus_oculatus
ENSPKIG00000004640	trmt12	99	54.118	ENSLAFG00000012519	TRMT12	97	54.118	Loxodonta_africana
ENSPKIG00000004640	trmt12	99	54.831	ENSMMUG00000015490	TRMT12	96	54.460	Macaca_mulatta
ENSPKIG00000004640	trmt12	100	59.753	ENSMAMG00000020311	trmt12	100	59.753	Mastacembelus_armatus
ENSPKIG00000004640	trmt12	99	60.769	ENSMZEG00005007349	trmt12	99	60.396	Maylandia_zebra
ENSPKIG00000004640	trmt12	99	55.213	ENSMGAG00000004174	TRMT12	95	55.213	Meleagris_gallopavo
ENSPKIG00000004640	trmt12	99	59.406	ENSMMOG00000000412	trmt12	99	59.406	Mola_mola
ENSPKIG00000004640	trmt12	99	53.545	ENSMODG00000021403	-	94	53.545	Monodelphis_domestica
ENSPKIG00000004640	trmt12	99	53.285	ENSMODG00000011798	-	87	53.285	Monodelphis_domestica
ENSPKIG00000004640	trmt12	99	62.308	ENSMALG00000008668	trmt12	99	61.881	Monopterus_albus
ENSPKIG00000004640	trmt12	99	54.854	MGP_CAROLIEiJ_G0019820	Trmt12	95	54.610	Mus_caroli
ENSPKIG00000004640	trmt12	99	54.612	ENSMUSG00000037085	Trmt12	95	54.374	Mus_musculus
ENSPKIG00000004640	trmt12	99	54.479	MGP_PahariEiJ_G0019829	Trmt12	95	54.245	Mus_pahari
ENSPKIG00000004640	trmt12	99	54.369	MGP_SPRETEiJ_G0020717	Trmt12	95	54.137	Mus_spretus
ENSPKIG00000004640	trmt12	99	55.314	ENSMPUG00000019150	TRMT12	96	54.930	Mustela_putorius_furo
ENSPKIG00000004640	trmt12	99	55.072	ENSMLUG00000003753	TRMT12	97	54.588	Myotis_lucifugus
ENSPKIG00000004640	trmt12	99	53.865	ENSNGAG00000014548	Trmt12	97	53.176	Nannospalax_galili
ENSPKIG00000004640	trmt12	99	61.282	ENSNBRG00000021510	trmt12	99	60.988	Neolamprologus_brichardi
ENSPKIG00000004640	trmt12	99	52.670	ENSOPRG00000008067	TRMT12	95	52.594	Ochotona_princeps
ENSPKIG00000004640	trmt12	99	55.556	ENSODEG00000018933	TRMT12	97	55.164	Octodon_degus
ENSPKIG00000004640	trmt12	99	61.282	ENSONIG00000002614	trmt12	99	61.139	Oreochromis_niloticus
ENSPKIG00000004640	trmt12	99	51.914	ENSOANG00000009987	TRMT12	98	51.914	Ornithorhynchus_anatinus
ENSPKIG00000004640	trmt12	99	51.325	ENSOCUG00000026379	TRMT12	95	51.054	Oryctolagus_cuniculus
ENSPKIG00000004640	trmt12	99	58.911	ENSORLG00000001280	trmt12	99	58.911	Oryzias_latipes
ENSPKIG00000004640	trmt12	99	58.663	ENSORLG00020000708	trmt12	99	58.663	Oryzias_latipes_hni
ENSPKIG00000004640	trmt12	99	58.663	ENSORLG00015012344	trmt12	99	58.663	Oryzias_latipes_hsok
ENSPKIG00000004640	trmt12	99	56.410	ENSOMEG00000015267	trmt12	98	56.188	Oryzias_melastigma
ENSPKIG00000004640	trmt12	99	55.181	ENSOGAG00000015845	TRMT12	97	55.164	Otolemur_garnettii
ENSPKIG00000004640	trmt12	60	61.567	ENSPSIG00000003476	TRMT12	99	61.567	Pelodiscus_sinensis
ENSPKIG00000004640	trmt12	99	56.436	ENSPMGG00000016356	trmt12	97	56.436	Periophthalmus_magnuspinnatus
ENSPKIG00000004640	trmt12	98	54.660	ENSPCIG00000002967	TRMT12	88	53.511	Phascolarctos_cinereus
ENSPKIG00000004640	trmt12	98	58.355	ENSPFOG00000016931	trmt12	94	58.355	Poecilia_formosa
ENSPKIG00000004640	trmt12	99	58.568	ENSPLAG00000020621	trmt12	99	58.374	Poecilia_latipinna
ENSPKIG00000004640	trmt12	99	58.312	ENSPMEG00000000818	trmt12	99	58.128	Poecilia_mexicana
ENSPKIG00000004640	trmt12	99	58.098	ENSPREG00000011621	trmt12	99	57.921	Poecilia_reticulata
ENSPKIG00000004640	trmt12	99	53.461	ENSPPYG00000018866	TRMT12	95	53.132	Pongo_abelii
ENSPKIG00000004640	trmt12	99	55.314	ENSPCAG00000000556	TRMT12	95	55.294	Procavia_capensis
ENSPKIG00000004640	trmt12	99	55.206	ENSPVAG00000009149	TRMT12	96	54.824	Pteropus_vampyrus
ENSPKIG00000004640	trmt12	97	61.458	ENSPNYG00000010696	trmt12	99	61.458	Pundamilia_nyererei
ENSPKIG00000004640	trmt12	99	58.473	ENSPNAG00000019028	trmt12	99	58.473	Pygocentrus_nattereri
ENSPKIG00000004640	trmt12	99	55.448	ENSRNOG00000008978	Trmt12	97	55.189	Rattus_norvegicus
ENSPKIG00000004640	trmt12	99	53.269	ENSSHAG00000003345	TRMT12	95	53.269	Sarcophilus_harrisii
ENSPKIG00000004640	trmt12	100	67.866	ENSSFOG00015006090	trmt12	100	67.866	Scleropages_formosus
ENSPKIG00000004640	trmt12	99	60.513	ENSSMAG00000013247	trmt12	99	60.396	Scophthalmus_maximus
ENSPKIG00000004640	trmt12	99	60.644	ENSSDUG00000006168	trmt12	99	60.644	Seriola_dumerili
ENSPKIG00000004640	trmt12	99	61.026	ENSSLDG00000025007	trmt12	99	60.891	Seriola_lalandi_dorsalis
ENSPKIG00000004640	trmt12	99	53.081	ENSSPUG00000005321	TRMT12	95	52.668	Sphenodon_punctatus
ENSPKIG00000004640	trmt12	99	60.668	ENSSPAG00000009435	trmt12	97	60.644	Stegastes_partitus
ENSPKIG00000004640	trmt12	99	53.717	ENSTGUG00000002280	TRMT12	99	54.676	Taeniopygia_guttata
ENSPKIG00000004640	trmt12	99	58.396	ENSTRUG00000011548	trmt12	99	57.389	Takifugu_rubripes
ENSPKIG00000004640	trmt12	99	55.283	ENSTNIG00000016866	trmt12	99	55.283	Tetraodon_nigroviridis
ENSPKIG00000004640	trmt12	99	55.206	ENSUAMG00000002067	TRMT12	97	54.824	Ursus_americanus
ENSPKIG00000004640	trmt12	99	55.797	ENSVPAG00000006519	TRMT12	96	55.399	Vicugna_pacos
ENSPKIG00000004640	trmt12	99	55.797	ENSVVUG00000016790	TRMT12	96	55.164	Vulpes_vulpes
ENSPKIG00000004640	trmt12	99	54.591	ENSXETG00000009641	trmt12	95	54.591	Xenopus_tropicalis
ENSPKIG00000004640	trmt12	99	57.653	ENSXCOG00000016505	trmt12	99	57.635	Xiphophorus_couchianus
ENSPKIG00000004640	trmt12	99	57.545	ENSXMAG00000025318	trmt12	99	57.531	Xiphophorus_maculatus