EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000004653 (Gene tree)
Gene ID: 111833451
Gene Symbol: utp6
Alias: -
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 8322 bases
Position: chrPGUA01000046.1:813890-822211
Accession: 111833451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000019520	U3_assoc_6	PF08640.11	7.4e-24	1	1
ENSPKIP00000019549	U3_assoc_6	PF08640.11	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000000114	-	3571	-	ENSPKIP00000019520	598 (aa)	XP_023647497	UPI000CD63FD3
ENSPKIT00000000145	-	3481	-	ENSPKIP00000019549	566 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000004653's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000004653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000004653	utp6	100	55.927	ENSG00000108651	UTP6	100	55.927	Homo_sapiens
ENSPKIG00000004653	utp6	100	71.405	ENSAPOG00000000435	utp6	100	71.405	Acanthochromis_polyacanthus
ENSPKIG00000004653	utp6	99	55.611	ENSAMEG00000005443	UTP6	99	55.611	Ailuropoda_melanoleuca
ENSPKIG00000004653	utp6	100	67.726	ENSACIG00000004124	utp6	100	67.726	Amphilophus_citrinellus
ENSPKIG00000004653	utp6	100	71.070	ENSAOCG00000016812	utp6	100	71.070	Amphiprion_ocellaris
ENSPKIG00000004653	utp6	100	71.070	ENSAPEG00000023565	utp6	100	71.070	Amphiprion_percula
ENSPKIG00000004653	utp6	100	72.408	ENSATEG00000003401	utp6	100	72.408	Anabas_testudineus
ENSPKIG00000004653	utp6	100	60.317	ENSAPLG00000005821	UTP6	99	58.545	Anas_platyrhynchos
ENSPKIG00000004653	utp6	100	60.267	ENSACAG00000009472	UTP6	100	60.267	Anolis_carolinensis
ENSPKIG00000004653	utp6	100	55.426	ENSANAG00000034603	UTP6	100	55.426	Aotus_nancymaae
ENSPKIG00000004653	utp6	100	70.401	ENSACLG00000006728	utp6	100	70.401	Astatotilapia_calliptera
ENSPKIG00000004653	utp6	100	73.579	ENSAMXG00000009478	utp6	100	73.579	Astyanax_mexicanus
ENSPKIG00000004653	utp6	100	51.252	ENSBTAG00000015612	UTP6	100	51.252	Bos_taurus
ENSPKIG00000004653	utp6	99	49.916	ENSBTAG00000003769	-	98	49.916	Bos_taurus
ENSPKIG00000004653	utp6	100	55.593	ENSCJAG00000014115	UTP6	100	55.593	Callithrix_jacchus
ENSPKIG00000004653	utp6	100	55.092	ENSCAFG00000018507	UTP6	100	55.092	Canis_familiaris
ENSPKIG00000004653	utp6	100	55.092	ENSCAFG00020014678	UTP6	100	55.092	Canis_lupus_dingo
ENSPKIG00000004653	utp6	100	51.586	ENSCHIG00000009726	-	100	51.586	Capra_hircus
ENSPKIG00000004653	utp6	100	51.586	ENSCHIG00000017954	-	100	51.586	Capra_hircus
ENSPKIG00000004653	utp6	99	50.502	ENSTSYG00000002202	UTP6	99	50.502	Carlito_syrichta
ENSPKIG00000004653	utp6	91	50.389	ENSCAPG00000017595	UTP6	93	50.870	Cavia_aperea
ENSPKIG00000004653	utp6	99	56.020	ENSCPOG00000014294	UTP6	100	56.020	Cavia_porcellus
ENSPKIG00000004653	utp6	100	51.753	ENSCCAG00000033318	-	100	51.753	Cebus_capucinus
ENSPKIG00000004653	utp6	100	55.593	ENSCATG00000034868	UTP6	100	55.593	Cercocebus_atys
ENSPKIG00000004653	utp6	99	55.686	ENSCLAG00000007274	UTP6	99	55.686	Chinchilla_lanigera
ENSPKIG00000004653	utp6	100	55.760	ENSCSAG00000006595	UTP6	100	55.760	Chlorocebus_sabaeus
ENSPKIG00000004653	utp6	73	46.875	ENSCHOG00000010940	-	73	46.875	Choloepus_hoffmanni
ENSPKIG00000004653	utp6	100	61.937	ENSCPBG00000004652	UTP6	100	61.937	Chrysemys_picta_bellii
ENSPKIG00000004653	utp6	99	31.220	ENSCING00000022947	-	99	31.220	Ciona_intestinalis
ENSPKIG00000004653	utp6	54	37.082	ENSCSAVG00000011416	-	99	37.082	Ciona_savignyi
ENSPKIG00000004653	utp6	88	41.098	ENSCANG00000031141	UTP6	90	41.098	Colobus_angolensis_palliatus
ENSPKIG00000004653	utp6	99	56.355	ENSCGRG00001000046	Utp6	100	56.355	Cricetulus_griseus_chok1gshd
ENSPKIG00000004653	utp6	99	55.654	ENSCGRG00000011543	Utp6	100	55.556	Cricetulus_griseus_crigri
ENSPKIG00000004653	utp6	100	63.773	ENSCSEG00000013422	utp6	100	75.410	Cynoglossus_semilaevis
ENSPKIG00000004653	utp6	100	69.064	ENSCVAG00000020322	utp6	100	69.064	Cyprinodon_variegatus
ENSPKIG00000004653	utp6	100	70.569	ENSDARG00000098433	utp6	100	80.663	Danio_rerio
ENSPKIG00000004653	utp6	100	56.260	ENSDNOG00000037018	UTP6	100	56.260	Dasypus_novemcinctus
ENSPKIG00000004653	utp6	91	56.410	ENSDORG00000003843	Utp6	99	56.410	Dipodomys_ordii
ENSPKIG00000004653	utp6	100	55.927	ENSEASG00005010870	UTP6	100	55.927	Equus_asinus_asinus
ENSPKIG00000004653	utp6	100	55.760	ENSECAG00000022217	UTP6	100	55.760	Equus_caballus
ENSPKIG00000004653	utp6	100	71.237	ENSELUG00000006618	utp6	100	71.237	Esox_lucius
ENSPKIG00000004653	utp6	100	54.000	ENSFCAG00000015795	UTP6	100	53.300	Felis_catus
ENSPKIG00000004653	utp6	100	60.768	ENSFALG00000002282	UTP6	100	60.768	Ficedula_albicollis
ENSPKIG00000004653	utp6	99	55.184	ENSFDAG00000019506	UTP6	100	55.184	Fukomys_damarensis
ENSPKIG00000004653	utp6	100	70.067	ENSFHEG00000010373	utp6	100	70.067	Fundulus_heteroclitus
ENSPKIG00000004653	utp6	100	66.722	ENSGMOG00000011958	utp6	100	66.722	Gadus_morhua
ENSPKIG00000004653	utp6	100	60.935	ENSGALG00000003260	UTP6	100	60.935	Gallus_gallus
ENSPKIG00000004653	utp6	100	70.401	ENSGAFG00000008505	utp6	100	70.401	Gambusia_affinis
ENSPKIG00000004653	utp6	100	70.234	ENSGACG00000019424	utp6	100	70.234	Gasterosteus_aculeatus
ENSPKIG00000004653	utp6	100	60.768	ENSGAGG00000004820	UTP6	100	60.768	Gopherus_agassizii
ENSPKIG00000004653	utp6	100	56.260	ENSGGOG00000013569	UTP6	100	56.260	Gorilla_gorilla
ENSPKIG00000004653	utp6	100	44.741	ENSGGOG00000026003	-	100	44.574	Gorilla_gorilla
ENSPKIG00000004653	utp6	100	70.401	ENSHBUG00000018668	utp6	100	70.401	Haplochromis_burtoni
ENSPKIG00000004653	utp6	99	51.765	ENSHGLG00000008642	-	99	51.765	Heterocephalus_glaber_female
ENSPKIG00000004653	utp6	99	55.017	ENSHGLG00000010332	UTP6	100	55.017	Heterocephalus_glaber_female
ENSPKIG00000004653	utp6	99	52.341	ENSHGLG00100014271	-	100	52.341	Heterocephalus_glaber_male
ENSPKIG00000004653	utp6	95	52.807	ENSHGLG00100006047	-	99	52.807	Heterocephalus_glaber_male
ENSPKIG00000004653	utp6	100	66.277	ENSHCOG00000017277	utp6	100	66.277	Hippocampus_comes
ENSPKIG00000004653	utp6	100	72.074	ENSIPUG00000022587	Utp6	100	72.074	Ictalurus_punctatus
ENSPKIG00000004653	utp6	99	56.355	ENSSTOG00000015875	UTP6	100	56.355	Ictidomys_tridecemlineatus
ENSPKIG00000004653	utp6	100	70.234	ENSKMAG00000021631	utp6	100	70.234	Kryptolebias_marmoratus
ENSPKIG00000004653	utp6	100	70.234	ENSLBEG00000002115	utp6	100	70.234	Labrus_bergylta
ENSPKIG00000004653	utp6	100	64.107	ENSLACG00000017158	UTP6	100	64.107	Latimeria_chalumnae
ENSPKIG00000004653	utp6	91	68.556	ENSLOCG00000013797	utp6	90	68.556	Lepisosteus_oculatus
ENSPKIG00000004653	utp6	100	55.259	ENSLAFG00000013008	UTP6	100	55.259	Loxodonta_africana
ENSPKIG00000004653	utp6	81	45.645	ENSMFAG00000041904	-	90	45.645	Macaca_fascicularis
ENSPKIG00000004653	utp6	100	55.593	ENSMFAG00000038842	UTP6	100	55.593	Macaca_fascicularis
ENSPKIG00000004653	utp6	100	55.593	ENSMMUG00000020403	UTP6	100	55.593	Macaca_mulatta
ENSPKIG00000004653	utp6	100	55.593	ENSMNEG00000039480	UTP6	100	55.593	Macaca_nemestrina
ENSPKIG00000004653	utp6	100	49.082	ENSMLEG00000032174	UTP6	100	49.082	Mandrillus_leucophaeus
ENSPKIG00000004653	utp6	99	42.857	ENSMLEG00000039364	-	99	42.070	Mandrillus_leucophaeus
ENSPKIG00000004653	utp6	100	70.903	ENSMAMG00000002228	utp6	99	70.903	Mastacembelus_armatus
ENSPKIG00000004653	utp6	100	70.401	ENSMZEG00005023895	utp6	100	70.401	Maylandia_zebra
ENSPKIG00000004653	utp6	100	60.387	ENSMGAG00000008111	UTP6	100	60.351	Meleagris_gallopavo
ENSPKIG00000004653	utp6	99	56.187	ENSMAUG00000021895	Utp6	100	56.187	Mesocricetus_auratus
ENSPKIG00000004653	utp6	100	54.758	ENSMICG00000002632	UTP6	100	54.758	Microcebus_murinus
ENSPKIG00000004653	utp6	99	55.351	ENSMOCG00000014163	Utp6	100	55.351	Microtus_ochrogaster
ENSPKIG00000004653	utp6	100	67.057	ENSMMOG00000008653	utp6	100	71.186	Mola_mola
ENSPKIG00000004653	utp6	100	59.098	ENSMODG00000019206	UTP6	100	59.098	Monodelphis_domestica
ENSPKIG00000004653	utp6	100	71.452	ENSMALG00000021112	utp6	100	71.452	Monopterus_albus
ENSPKIG00000004653	utp6	99	55.017	MGP_CAROLIEiJ_G0016828	Utp6	100	55.017	Mus_caroli
ENSPKIG00000004653	utp6	99	55.017	ENSMUSG00000035575	Utp6	100	55.017	Mus_musculus
ENSPKIG00000004653	utp6	99	51.505	MGP_PahariEiJ_G0017965	Utp6	100	51.505	Mus_pahari
ENSPKIG00000004653	utp6	99	54.682	MGP_SPRETEiJ_G0017672	Utp6	100	54.682	Mus_spretus
ENSPKIG00000004653	utp6	100	54.013	ENSMPUG00000014581	UTP6	100	54.013	Mustela_putorius_furo
ENSPKIG00000004653	utp6	100	54.591	ENSMLUG00000016422	UTP6	100	54.591	Myotis_lucifugus
ENSPKIG00000004653	utp6	99	55.351	ENSNGAG00000015482	Utp6	100	55.351	Nannospalax_galili
ENSPKIG00000004653	utp6	100	70.401	ENSNBRG00000019714	utp6	100	70.401	Neolamprologus_brichardi
ENSPKIG00000004653	utp6	100	54.758	ENSNLEG00000011009	UTP6	100	54.758	Nomascus_leucogenys
ENSPKIG00000004653	utp6	83	65.854	ENSOPRG00000008446	-	79	65.854	Ochotona_princeps
ENSPKIG00000004653	utp6	66	60.338	ENSODEG00000011971	UTP6	98	60.338	Octodon_degus
ENSPKIG00000004653	utp6	100	70.067	ENSONIG00000018090	utp6	100	70.067	Oreochromis_niloticus
ENSPKIG00000004653	utp6	100	57.570	ENSOANG00000004279	UTP6	97	57.118	Ornithorhynchus_anatinus
ENSPKIG00000004653	utp6	99	54.515	ENSOCUG00000016980	UTP6	99	54.515	Oryctolagus_cuniculus
ENSPKIG00000004653	utp6	99	70.569	ENSORLG00000003546	utp6	64	70.569	Oryzias_latipes
ENSPKIG00000004653	utp6	99	70.569	ENSORLG00020010377	utp6	99	70.569	Oryzias_latipes_hni
ENSPKIG00000004653	utp6	99	70.067	ENSORLG00015008893	utp6	99	70.067	Oryzias_latipes_hsok
ENSPKIG00000004653	utp6	100	69.115	ENSOMEG00000017487	utp6	100	69.115	Oryzias_melastigma
ENSPKIG00000004653	utp6	87	47.529	ENSOGAG00000004511	UTP6	100	47.529	Otolemur_garnettii
ENSPKIG00000004653	utp6	100	51.753	ENSOARG00000013474	UTP6	100	51.753	Ovis_aries
ENSPKIG00000004653	utp6	100	56.093	ENSPPAG00000038089	UTP6	100	56.093	Pan_paniscus
ENSPKIG00000004653	utp6	100	45.242	ENSPPAG00000016895	-	100	45.075	Pan_paniscus
ENSPKIG00000004653	utp6	100	55.760	ENSPPRG00000001010	UTP6	100	55.760	Panthera_pardus
ENSPKIG00000004653	utp6	100	55.760	ENSPTIG00000013913	UTP6	100	55.760	Panthera_tigris_altaica
ENSPKIG00000004653	utp6	100	45.150	ENSPTRG00000044798	-	100	45.075	Pan_troglodytes
ENSPKIG00000004653	utp6	100	56.093	ENSPTRG00000008977	UTP6	100	56.093	Pan_troglodytes
ENSPKIG00000004653	utp6	100	53.667	ENSPANG00000023113	UTP6	100	53.667	Papio_anubis
ENSPKIG00000004653	utp6	99	42.681	ENSPANG00000034274	-	98	42.203	Papio_anubis
ENSPKIG00000004653	utp6	100	59.933	ENSPSIG00000012435	UTP6	100	59.933	Pelodiscus_sinensis
ENSPKIG00000004653	utp6	100	70.234	ENSPMGG00000009548	utp6	100	70.234	Periophthalmus_magnuspinnatus
ENSPKIG00000004653	utp6	99	55.686	ENSPEMG00000014081	Utp6	100	55.686	Peromyscus_maniculatus_bairdii
ENSPKIG00000004653	utp6	98	47.163	ENSPMAG00000009561	utp6	100	47.163	Petromyzon_marinus
ENSPKIG00000004653	utp6	100	61.436	ENSPCIG00000029968	UTP6	86	61.436	Phascolarctos_cinereus
ENSPKIG00000004653	utp6	100	69.565	ENSPFOG00000013918	utp6	100	69.565	Poecilia_formosa
ENSPKIG00000004653	utp6	100	69.398	ENSPLAG00000017825	utp6	100	69.398	Poecilia_latipinna
ENSPKIG00000004653	utp6	100	69.900	ENSPMEG00000008133	utp6	100	69.900	Poecilia_mexicana
ENSPKIG00000004653	utp6	100	68.896	ENSPREG00000013108	utp6	99	68.896	Poecilia_reticulata
ENSPKIG00000004653	utp6	100	53.088	ENSPPYG00000008154	UTP6	100	53.088	Pongo_abelii
ENSPKIG00000004653	utp6	100	54.424	ENSPCOG00000010224	UTP6	100	54.424	Propithecus_coquereli
ENSPKIG00000004653	utp6	100	52.421	ENSPVAG00000015759	UTP6	100	52.421	Pteropus_vampyrus
ENSPKIG00000004653	utp6	100	70.234	ENSPNYG00000002290	utp6	100	70.234	Pundamilia_nyererei
ENSPKIG00000004653	utp6	100	70.736	ENSPNAG00000027370	utp6	100	70.736	Pygocentrus_nattereri
ENSPKIG00000004653	utp6	99	54.682	ENSRNOG00000014209	Utp6	100	54.682	Rattus_norvegicus
ENSPKIG00000004653	utp6	100	55.426	ENSRBIG00000020822	UTP6	100	55.426	Rhinopithecus_bieti
ENSPKIG00000004653	utp6	100	55.426	ENSRROG00000036838	UTP6	100	55.426	Rhinopithecus_roxellana
ENSPKIG00000004653	utp6	52	62.671	ENSSHAG00000018792	-	96	62.671	Sarcophilus_harrisii
ENSPKIG00000004653	utp6	100	74.582	ENSSFOG00015005978	utp6	100	74.582	Scleropages_formosus
ENSPKIG00000004653	utp6	100	71.739	ENSSMAG00000014772	utp6	100	71.739	Scophthalmus_maximus
ENSPKIG00000004653	utp6	100	72.241	ENSSDUG00000000329	utp6	100	72.241	Seriola_dumerili
ENSPKIG00000004653	utp6	100	71.572	ENSSLDG00000016724	utp6	100	71.572	Seriola_lalandi_dorsalis
ENSPKIG00000004653	utp6	99	48.826	ENSSARG00000010778	UTP6	99	48.826	Sorex_araneus
ENSPKIG00000004653	utp6	100	60.100	ENSSPUG00000005273	UTP6	100	60.100	Sphenodon_punctatus
ENSPKIG00000004653	utp6	100	70.234	ENSSPAG00000011871	utp6	99	70.234	Stegastes_partitus
ENSPKIG00000004653	utp6	100	55.760	ENSSSCG00000017745	UTP6	100	55.760	Sus_scrofa
ENSPKIG00000004653	utp6	100	60.267	ENSTGUG00000004999	UTP6	100	60.267	Taeniopygia_guttata
ENSPKIG00000004653	utp6	99	67.337	ENSTRUG00000012005	utp6	100	67.337	Takifugu_rubripes
ENSPKIG00000004653	utp6	99	68.007	ENSTNIG00000003235	utp6	100	68.007	Tetraodon_nigroviridis
ENSPKIG00000004653	utp6	67	56.354	ENSTBEG00000005388	-	64	56.354	Tupaia_belangeri
ENSPKIG00000004653	utp6	100	54.925	ENSTTRG00000009911	UTP6	100	54.925	Tursiops_truncatus
ENSPKIG00000004653	utp6	99	55.444	ENSUMAG00000015139	UTP6	99	55.444	Ursus_maritimus
ENSPKIG00000004653	utp6	100	55.593	ENSVPAG00000005782	UTP6	100	55.593	Vicugna_pacos
ENSPKIG00000004653	utp6	100	55.259	ENSVVUG00000012238	UTP6	100	55.259	Vulpes_vulpes
ENSPKIG00000004653	utp6	100	50.083	ENSXETG00000020057	utp6	100	50.083	Xenopus_tropicalis
ENSPKIG00000004653	utp6	100	69.000	ENSXCOG00000013626	utp6	100	80.822	Xiphophorus_couchianus
ENSPKIG00000004653	utp6	100	69.231	ENSXMAG00000017414	utp6	100	69.231	Xiphophorus_maculatus