EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000004860 (Gene tree)
Gene ID: 111832884
Gene Symbol: GPATCH8
Alias: -
Full Name: G patch domain-containing protein 8-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 38909 bases
Position: chrPGUA01000428.1:221577-260485
Accession: 111832884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000019881	zf-C2H2_jaz	PF12171.8	3.6e-06	1	1
ENSPKIP00000019864	zf-C2H2_jaz	PF12171.8	3.7e-06	1	1
ENSPKIP00000019881	G-patch	PF01585.23	1.4e-12	1	1
ENSPKIP00000019864	G-patch	PF01585.23	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000000483	GPATCH8-202	4494	-	ENSPKIP00000019881	1410 (aa)	-	-
ENSPKIT00000000466	GPATCH8-201	4623	-	ENSPKIP00000019864	1421 (aa)	XP_023646395	UPI000CD66BB2

Gene Model

Click here to download ENSPKIG00000004860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000004860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000004860	GPATCH8	59	55.782	ENSPKIG00000018753	gpatch8	56	55.569

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000004860	GPATCH8	50	57.268	ENSAPOG00000023938	gpatch8	56	55.582	Acanthochromis_polyacanthus
ENSPKIG00000004860	GPATCH8	54	55.543	ENSACIG00000012241	gpatch8	56	55.386	Amphilophus_citrinellus
ENSPKIG00000004860	GPATCH8	50	56.927	ENSAOCG00000018102	gpatch8	56	54.697	Amphiprion_ocellaris
ENSPKIG00000004860	GPATCH8	50	56.962	ENSAPEG00000016776	gpatch8	56	55.516	Amphiprion_percula
ENSPKIG00000004860	GPATCH8	54	57.193	ENSATEG00000003247	gpatch8	56	57.518	Anabas_testudineus
ENSPKIG00000004860	GPATCH8	54	55.792	ENSACLG00000004165	gpatch8	56	55.924	Astatotilapia_calliptera
ENSPKIG00000004860	GPATCH8	60	50.000	ENSEBUG00000005749	gpatch8	50	54.481	Eptatretus_burgeri
ENSPKIG00000004860	GPATCH8	50	54.254	ENSELUG00000019920	gpatch8	57	55.747	Esox_lucius
ENSPKIG00000004860	GPATCH8	52	56.790	ENSGAFG00000018138	gpatch8	56	54.923	Gambusia_affinis
ENSPKIG00000004860	GPATCH8	54	55.347	ENSHBUG00000002669	gpatch8	56	56.014	Haplochromis_burtoni
ENSPKIG00000004860	GPATCH8	76	58.292	ENSHGLG00100010738	GPATCH8	95	57.616	Heterocephalus_glaber_male
ENSPKIG00000004860	GPATCH8	57	55.396	ENSIPUG00000015431	gpatch8	55	57.379	Ictalurus_punctatus
ENSPKIG00000004860	GPATCH8	50	56.085	ENSLBEG00000023352	gpatch8	56	54.695	Labrus_bergylta
ENSPKIG00000004860	GPATCH8	61	84.211	ENSLOCG00000012265	gpatch8	77	84.211	Lepisosteus_oculatus
ENSPKIG00000004860	GPATCH8	54	56.479	ENSMAMG00000001618	gpatch8	54	56.379	Mastacembelus_armatus
ENSPKIG00000004860	GPATCH8	54	55.792	ENSMZEG00005022584	gpatch8	56	56.043	Maylandia_zebra
ENSPKIG00000004860	GPATCH8	50	56.484	ENSMALG00000004204	gpatch8	56	55.900	Monopterus_albus
ENSPKIG00000004860	GPATCH8	50	70.122	ENSMLUG00000013840	GPATCH8	52	68.750	Myotis_lucifugus
ENSPKIG00000004860	GPATCH8	54	56.840	ENSNBRG00000016402	gpatch8	56	56.773	Neolamprologus_brichardi
ENSPKIG00000004860	GPATCH8	54	56.059	ENSONIG00000001292	gpatch8	55	56.473	Oreochromis_niloticus
ENSPKIG00000004860	GPATCH8	51	56.810	ENSORLG00000028497	gpatch8	53	54.756	Oryzias_latipes
ENSPKIG00000004860	GPATCH8	51	56.511	ENSORLG00020006656	gpatch8	53	55.650	Oryzias_latipes_hni
ENSPKIG00000004860	GPATCH8	51	56.810	ENSORLG00015019797	gpatch8	53	56.404	Oryzias_latipes_hsok
ENSPKIG00000004860	GPATCH8	53	56.663	ENSPFOG00000014833	gpatch8	56	55.938	Poecilia_formosa
ENSPKIG00000004860	GPATCH8	52	56.650	ENSPREG00000008911	gpatch8	56	55.319	Poecilia_reticulata
ENSPKIG00000004860	GPATCH8	54	55.910	ENSPNYG00000009426	gpatch8	56	56.043	Pundamilia_nyererei
ENSPKIG00000004860	GPATCH8	54	56.849	ENSPNAG00000016200	gpatch8	64	57.794	Pygocentrus_nattereri
ENSPKIG00000004860	GPATCH8	53	60.945	ENSSFOG00015021377	-	55	60.319	Scleropages_formosus
ENSPKIG00000004860	GPATCH8	54	65.693	ENSSFOG00015004299	GPATCH8	89	76.402	Scleropages_formosus
ENSPKIG00000004860	GPATCH8	52	59.483	ENSSLDG00000009225	gpatch8	56	55.869	Seriola_lalandi_dorsalis
ENSPKIG00000004860	GPATCH8	50	58.808	ENSTRUG00000020474	gpatch8	53	58.145	Takifugu_rubripes
ENSPKIG00000004860	GPATCH8	58	64.000	ENSTBEG00000009486	GPATCH8	54	66.929	Tupaia_belangeri
ENSPKIG00000004860	GPATCH8	52	56.667	ENSXCOG00000016680	gpatch8	56	55.201	Xiphophorus_couchianus