EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000004876 (Gene tree)
Gene ID: 111847180
Gene Symbol: gfm1
Alias: -
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 10483 bases
Position: chrPGUA01000165.1:11225-21707
Accession: 111847180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000019929	GTP_EFTU	PF00009.27	5.7e-62	1	1
ENSPKIP00000019929	GTP_EFTU_D2	PF03144.25	2.2e-13	1	1
ENSPKIP00000019929	EFG_IV	PF03764.18	2.4e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000000532	-	2377	XM_023818148	ENSPKIP00000019929	748 (aa)	XP_023673916	UPI000CD62491

Gene Model

Click here to download ENSPKIG00000004876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000004876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000004876	gfm1	72	39.333	ENSPKIG00000018903	-	71	39.333
ENSPKIG00000004876	gfm1	74	39.333	ENSPKIG00000011101	eef2b	72	39.333
ENSPKIG00000004876	gfm1	73	38.667	ENSPKIG00000014332	eef2l2	72	38.667
ENSPKIG00000004876	gfm1	92	34.341	ENSPKIG00000018878	gfm2	95	34.753

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000004876	gfm1	97	81.129	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSPKIG00000004876	gfm1	93	82.665	ENSAPOG00000016489	gfm1	99	82.665	Acanthochromis_polyacanthus
ENSPKIG00000004876	gfm1	97	81.818	ENSAMEG00000013542	GFM1	96	81.818	Ailuropoda_melanoleuca
ENSPKIG00000004876	gfm1	97	79.558	ENSACIG00000014465	gfm1	94	79.558	Amphilophus_citrinellus
ENSPKIG00000004876	gfm1	99	83.042	ENSAOCG00000006023	gfm1	99	83.042	Amphiprion_ocellaris
ENSPKIG00000004876	gfm1	99	82.907	ENSAPEG00000024499	gfm1	99	83.543	Amphiprion_percula
ENSPKIG00000004876	gfm1	100	82.620	ENSATEG00000013789	gfm1	100	82.620	Anabas_testudineus
ENSPKIG00000004876	gfm1	97	79.972	ENSAPLG00000005022	GFM1	99	79.972	Anas_platyrhynchos
ENSPKIG00000004876	gfm1	97	80.414	ENSACAG00000006829	GFM1	98	80.414	Anolis_carolinensis
ENSPKIG00000004876	gfm1	97	80.716	ENSANAG00000035983	GFM1	97	80.716	Aotus_nancymaae
ENSPKIG00000004876	gfm1	100	83.289	ENSACLG00000016586	gfm1	100	83.289	Astatotilapia_calliptera
ENSPKIG00000004876	gfm1	100	82.754	ENSAMXG00000013435	gfm1	98	83.858	Astyanax_mexicanus
ENSPKIG00000004876	gfm1	96	81.311	ENSBTAG00000027795	GFM1	95	81.311	Bos_taurus
ENSPKIG00000004876	gfm1	94	57.632	WBGene00009246	gfm-1	95	57.444	Caenorhabditis_elegans
ENSPKIG00000004876	gfm1	97	81.129	ENSCJAG00000000363	GFM1	97	81.129	Callithrix_jacchus
ENSPKIG00000004876	gfm1	96	82.361	ENSCAFG00000009006	GFM1	100	82.249	Canis_familiaris
ENSPKIG00000004876	gfm1	96	82.361	ENSCAFG00020005878	GFM1	99	82.361	Canis_lupus_dingo
ENSPKIG00000004876	gfm1	96	81.450	ENSCHIG00000015220	GFM1	95	81.450	Capra_hircus
ENSPKIG00000004876	gfm1	99	79.920	ENSTSYG00000002013	GFM1	99	79.920	Carlito_syrichta
ENSPKIG00000004876	gfm1	96	71.784	ENSCAPG00000005699	GFM1	97	71.508	Cavia_aperea
ENSPKIG00000004876	gfm1	96	82.173	ENSCPOG00000001194	GFM1	95	82.173	Cavia_porcellus
ENSPKIG00000004876	gfm1	97	80.716	ENSCCAG00000025561	GFM1	97	80.716	Cebus_capucinus
ENSPKIG00000004876	gfm1	97	80.854	ENSCATG00000037622	GFM1	97	80.854	Cercocebus_atys
ENSPKIG00000004876	gfm1	96	81.476	ENSCLAG00000002503	GFM1	95	81.476	Chinchilla_lanigera
ENSPKIG00000004876	gfm1	97	80.579	ENSCSAG00000012162	GFM1	97	80.579	Chlorocebus_sabaeus
ENSPKIG00000004876	gfm1	97	72.727	ENSCHOG00000004867	GFM1	96	72.727	Choloepus_hoffmanni
ENSPKIG00000004876	gfm1	100	79.144	ENSCPBG00000018367	GFM1	99	79.144	Chrysemys_picta_bellii
ENSPKIG00000004876	gfm1	97	57.531	ENSCING00000011960	-	96	57.531	Ciona_intestinalis
ENSPKIG00000004876	gfm1	95	59.167	ENSCSAVG00000008514	-	99	59.167	Ciona_savignyi
ENSPKIG00000004876	gfm1	97	80.716	ENSCANG00000031714	GFM1	97	80.716	Colobus_angolensis_palliatus
ENSPKIG00000004876	gfm1	100	79.095	ENSCGRG00001022095	GFM1	100	79.095	Cricetulus_griseus_chok1gshd
ENSPKIG00000004876	gfm1	100	79.095	ENSCGRG00000012043	GFM1	100	79.095	Cricetulus_griseus_crigri
ENSPKIG00000004876	gfm1	97	78.838	ENSCSEG00000017088	gfm1	99	78.838	Cynoglossus_semilaevis
ENSPKIG00000004876	gfm1	99	84.926	ENSCVAG00000004126	gfm1	99	84.926	Cyprinodon_variegatus
ENSPKIG00000004876	gfm1	100	82.353	ENSDARG00000063624	gfm1	100	82.353	Danio_rerio
ENSPKIG00000004876	gfm1	55	80.196	ENSDNOG00000016385	-	100	80.196	Dasypus_novemcinctus
ENSPKIG00000004876	gfm1	96	81.058	ENSDORG00000014165	Gfm1	95	81.058	Dipodomys_ordii
ENSPKIG00000004876	gfm1	95	67.419	FBgn0263133	mEFG1	95	67.419	Drosophila_melanogaster
ENSPKIG00000004876	gfm1	96	74.167	ENSETEG00000019197	GFM1	95	74.167	Echinops_telfairi
ENSPKIG00000004876	gfm1	90	64.243	ENSEBUG00000012794	gfm1	99	64.243	Eptatretus_burgeri
ENSPKIG00000004876	gfm1	96	60.249	ENSEEUG00000000429	GFM1	99	60.249	Erinaceus_europaeus
ENSPKIG00000004876	gfm1	100	82.219	ENSELUG00000014728	gfm1	100	82.219	Esox_lucius
ENSPKIG00000004876	gfm1	96	81.337	ENSFCAG00000013291	GFM1	95	81.337	Felis_catus
ENSPKIG00000004876	gfm1	90	80.593	ENSFALG00000007619	GFM1	100	80.593	Ficedula_albicollis
ENSPKIG00000004876	gfm1	96	82.033	ENSFDAG00000016559	GFM1	95	82.033	Fukomys_damarensis
ENSPKIG00000004876	gfm1	100	83.690	ENSFHEG00000006091	gfm1	100	83.690	Fundulus_heteroclitus
ENSPKIG00000004876	gfm1	97	82.393	ENSGMOG00000010161	gfm1	100	82.393	Gadus_morhua
ENSPKIG00000004876	gfm1	98	79.348	ENSGALG00000009634	GFM1	99	79.348	Gallus_gallus
ENSPKIG00000004876	gfm1	100	83.422	ENSGAFG00000012527	gfm1	100	83.422	Gambusia_affinis
ENSPKIG00000004876	gfm1	99	84.091	ENSGACG00000009864	gfm1	99	84.091	Gasterosteus_aculeatus
ENSPKIG00000004876	gfm1	97	81.129	ENSGGOG00000003085	GFM1	97	81.129	Gorilla_gorilla
ENSPKIG00000004876	gfm1	100	83.422	ENSHBUG00000002120	gfm1	100	83.422	Haplochromis_burtoni
ENSPKIG00000004876	gfm1	96	81.198	ENSHGLG00000016855	GFM1	100	78.780	Heterocephalus_glaber_female
ENSPKIG00000004876	gfm1	96	81.198	ENSHGLG00100013049	GFM1	100	78.780	Heterocephalus_glaber_male
ENSPKIG00000004876	gfm1	99	83.715	ENSHCOG00000007638	gfm1	99	83.715	Hippocampus_comes
ENSPKIG00000004876	gfm1	100	82.754	ENSIPUG00000005873	gfm1	100	82.754	Ictalurus_punctatus
ENSPKIG00000004876	gfm1	100	78.104	ENSSTOG00000010150	GFM1	100	78.104	Ictidomys_tridecemlineatus
ENSPKIG00000004876	gfm1	100	77.881	ENSJJAG00000016447	Gfm1	100	77.881	Jaculus_jaculus
ENSPKIG00000004876	gfm1	100	82.219	ENSKMAG00000020768	gfm1	100	82.219	Kryptolebias_marmoratus
ENSPKIG00000004876	gfm1	94	84.165	ENSLBEG00000021315	gfm1	100	84.165	Labrus_bergylta
ENSPKIG00000004876	gfm1	100	80.882	ENSLACG00000012295	GFM1	100	80.882	Latimeria_chalumnae
ENSPKIG00000004876	gfm1	97	78.962	ENSLOCG00000003778	gfm1	99	78.962	Lepisosteus_oculatus
ENSPKIG00000004876	gfm1	96	79.666	ENSLAFG00000010945	GFM1	99	78.134	Loxodonta_africana
ENSPKIG00000004876	gfm1	97	80.992	ENSMFAG00000035731	GFM1	97	80.992	Macaca_fascicularis
ENSPKIG00000004876	gfm1	97	80.992	ENSMMUG00000004961	GFM1	97	80.992	Macaca_mulatta
ENSPKIG00000004876	gfm1	97	80.854	ENSMNEG00000033245	GFM1	97	80.854	Macaca_nemestrina
ENSPKIG00000004876	gfm1	96	79.805	ENSMLEG00000030908	GFM1	99	79.376	Mandrillus_leucophaeus
ENSPKIG00000004876	gfm1	100	83.957	ENSMAMG00000011760	gfm1	100	83.957	Mastacembelus_armatus
ENSPKIG00000004876	gfm1	100	83.422	ENSMZEG00005016639	gfm1	100	83.422	Maylandia_zebra
ENSPKIG00000004876	gfm1	97	80.748	ENSMGAG00000010641	GFM1	97	80.748	Meleagris_gallopavo
ENSPKIG00000004876	gfm1	100	79.283	ENSMAUG00000000611	Gfm1	100	79.283	Mesocricetus_auratus
ENSPKIG00000004876	gfm1	97	81.818	ENSMICG00000049086	GFM1	96	81.818	Microcebus_murinus
ENSPKIG00000004876	gfm1	100	79.361	ENSMOCG00000000465	Gfm1	100	79.361	Microtus_ochrogaster
ENSPKIG00000004876	gfm1	97	83.747	ENSMMOG00000012538	gfm1	98	83.747	Mola_mola
ENSPKIG00000004876	gfm1	97	79.724	ENSMODG00000015673	GFM1	98	79.724	Monodelphis_domestica
ENSPKIG00000004876	gfm1	98	83.060	ENSMALG00000012508	gfm1	97	83.060	Monopterus_albus
ENSPKIG00000004876	gfm1	100	78.562	MGP_CAROLIEiJ_G0025052	Gfm1	100	78.562	Mus_caroli
ENSPKIG00000004876	gfm1	100	78.695	ENSMUSG00000027774	Gfm1	100	78.695	Mus_musculus
ENSPKIG00000004876	gfm1	100	78.961	MGP_PahariEiJ_G0026495	Gfm1	100	78.961	Mus_pahari
ENSPKIG00000004876	gfm1	100	78.695	MGP_SPRETEiJ_G0025994	Gfm1	100	78.695	Mus_spretus
ENSPKIG00000004876	gfm1	96	82.451	ENSMPUG00000002859	GFM1	95	82.451	Mustela_putorius_furo
ENSPKIG00000004876	gfm1	96	81.198	ENSMLUG00000000452	GFM1	95	81.198	Myotis_lucifugus
ENSPKIG00000004876	gfm1	100	78.800	ENSNGAG00000012375	Gfm1	100	78.800	Nannospalax_galili
ENSPKIG00000004876	gfm1	97	84.509	ENSNBRG00000004631	gfm1	99	84.509	Neolamprologus_brichardi
ENSPKIG00000004876	gfm1	97	81.129	ENSNLEG00000004176	GFM1	97	81.129	Nomascus_leucogenys
ENSPKIG00000004876	gfm1	91	72.059	ENSMEUG00000007784	GFM1	99	72.059	Notamacropus_eugenii
ENSPKIG00000004876	gfm1	97	80.992	ENSOPRG00000009860	GFM1	98	80.992	Ochotona_princeps
ENSPKIG00000004876	gfm1	96	81.755	ENSODEG00000004316	GFM1	95	81.755	Octodon_degus
ENSPKIG00000004876	gfm1	100	83.556	ENSONIG00000003772	gfm1	100	83.556	Oreochromis_niloticus
ENSPKIG00000004876	gfm1	96	82.451	ENSOCUG00000013561	GFM1	95	82.451	Oryctolagus_cuniculus
ENSPKIG00000004876	gfm1	95	84.887	ENSORLG00000006487	gfm1	100	84.887	Oryzias_latipes
ENSPKIG00000004876	gfm1	100	82.888	ENSORLG00020003362	gfm1	100	82.888	Oryzias_latipes_hni
ENSPKIG00000004876	gfm1	100	82.487	ENSORLG00015005829	gfm1	100	82.487	Oryzias_latipes_hsok
ENSPKIG00000004876	gfm1	100	82.620	ENSOMEG00000012894	gfm1	100	82.620	Oryzias_melastigma
ENSPKIG00000004876	gfm1	97	80.441	ENSOGAG00000008298	GFM1	96	80.441	Otolemur_garnettii
ENSPKIG00000004876	gfm1	96	80.694	ENSOARG00000002409	GFM1	99	80.694	Ovis_aries
ENSPKIG00000004876	gfm1	97	81.129	ENSPPAG00000033881	GFM1	97	81.129	Pan_paniscus
ENSPKIG00000004876	gfm1	96	81.337	ENSPPRG00000009281	GFM1	95	81.337	Panthera_pardus
ENSPKIG00000004876	gfm1	96	81.198	ENSPTIG00000012416	GFM1	95	81.198	Panthera_tigris_altaica
ENSPKIG00000004876	gfm1	97	81.129	ENSPTRG00000015570	GFM1	97	81.129	Pan_troglodytes
ENSPKIG00000004876	gfm1	97	80.854	ENSPANG00000016512	GFM1	97	80.854	Papio_anubis
ENSPKIG00000004876	gfm1	100	80.348	ENSPSIG00000012567	GFM1	99	80.348	Pelodiscus_sinensis
ENSPKIG00000004876	gfm1	97	82.483	ENSPMGG00000014068	gfm1	100	82.483	Periophthalmus_magnuspinnatus
ENSPKIG00000004876	gfm1	100	79.095	ENSPEMG00000008942	Gfm1	100	79.095	Peromyscus_maniculatus_bairdii
ENSPKIG00000004876	gfm1	86	76.406	ENSPCIG00000020195	GFM1	98	77.287	Phascolarctos_cinereus
ENSPKIG00000004876	gfm1	100	84.091	ENSPFOG00000011022	gfm1	100	84.091	Poecilia_formosa
ENSPKIG00000004876	gfm1	97	85.201	ENSPLAG00000019585	gfm1	100	83.708	Poecilia_latipinna
ENSPKIG00000004876	gfm1	100	84.225	ENSPMEG00000012376	gfm1	100	84.225	Poecilia_mexicana
ENSPKIG00000004876	gfm1	100	84.091	ENSPREG00000001332	gfm1	95	84.091	Poecilia_reticulata
ENSPKIG00000004876	gfm1	97	80.716	ENSPPYG00000014244	GFM1	97	80.716	Pongo_abelii
ENSPKIG00000004876	gfm1	94	80.654	ENSPCAG00000008934	GFM1	100	80.654	Procavia_capensis
ENSPKIG00000004876	gfm1	97	81.129	ENSPCOG00000022259	GFM1	99	79.786	Propithecus_coquereli
ENSPKIG00000004876	gfm1	96	81.198	ENSPVAG00000013605	GFM1	95	81.198	Pteropus_vampyrus
ENSPKIG00000004876	gfm1	100	83.155	ENSPNYG00000006037	gfm1	100	83.155	Pundamilia_nyererei
ENSPKIG00000004876	gfm1	100	83.957	ENSPNAG00000001237	gfm1	100	83.957	Pygocentrus_nattereri
ENSPKIG00000004876	gfm1	100	79.095	ENSRNOG00000012873	Gfm1	100	79.095	Rattus_norvegicus
ENSPKIG00000004876	gfm1	97	80.716	ENSRBIG00000031363	GFM1	97	80.716	Rhinopithecus_bieti
ENSPKIG00000004876	gfm1	97	80.854	ENSRROG00000031081	GFM1	97	80.854	Rhinopithecus_roxellana
ENSPKIG00000004876	gfm1	92	56.978	YLR069C	-	90	56.978	Saccharomyces_cerevisiae
ENSPKIG00000004876	gfm1	97	81.129	ENSSBOG00000023252	GFM1	97	81.129	Saimiri_boliviensis_boliviensis
ENSPKIG00000004876	gfm1	97	80.276	ENSSHAG00000017772	GFM1	97	80.276	Sarcophilus_harrisii
ENSPKIG00000004876	gfm1	100	87.717	ENSSFOG00015003117	gfm1	100	87.717	Scleropages_formosus
ENSPKIG00000004876	gfm1	100	82.620	ENSSMAG00000013221	gfm1	100	82.620	Scophthalmus_maximus
ENSPKIG00000004876	gfm1	100	84.358	ENSSDUG00000018665	gfm1	100	84.358	Seriola_dumerili
ENSPKIG00000004876	gfm1	100	84.225	ENSSLDG00000020606	gfm1	100	84.225	Seriola_lalandi_dorsalis
ENSPKIG00000004876	gfm1	97	79.172	ENSSPUG00000018686	GFM1	98	79.172	Sphenodon_punctatus
ENSPKIG00000004876	gfm1	100	83.422	ENSSPAG00000008800	gfm1	100	83.422	Stegastes_partitus
ENSPKIG00000004876	gfm1	96	81.450	ENSSSCG00000025651	GFM1	95	81.450	Sus_scrofa
ENSPKIG00000004876	gfm1	100	82.086	ENSTRUG00000009244	gfm1	100	82.086	Takifugu_rubripes
ENSPKIG00000004876	gfm1	100	83.289	ENSTNIG00000007729	gfm1	100	83.289	Tetraodon_nigroviridis
ENSPKIG00000004876	gfm1	90	73.778	ENSTBEG00000017404	GFM1	89	73.778	Tupaia_belangeri
ENSPKIG00000004876	gfm1	96	80.335	ENSTTRG00000001735	GFM1	95	80.335	Tursiops_truncatus
ENSPKIG00000004876	gfm1	96	82.312	ENSUAMG00000026381	GFM1	95	82.312	Ursus_americanus
ENSPKIG00000004876	gfm1	96	82.312	ENSUMAG00000011268	GFM1	95	82.312	Ursus_maritimus
ENSPKIG00000004876	gfm1	96	77.964	ENSVPAG00000009444	GFM1	95	77.964	Vicugna_pacos
ENSPKIG00000004876	gfm1	96	82.402	ENSVVUG00000020091	GFM1	100	81.953	Vulpes_vulpes
ENSPKIG00000004876	gfm1	96	82.706	ENSXETG00000032551	GFM1	95	82.706	Xenopus_tropicalis
ENSPKIG00000004876	gfm1	50	85.791	ENSXCOG00000012590	gfm1	86	85.791	Xiphophorus_couchianus
ENSPKIG00000004876	gfm1	100	83.690	ENSXMAG00000000261	gfm1	100	83.690	Xiphophorus_maculatus