EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000005033 (Gene tree)
Gene ID: 111836508
Gene Symbol: cstf2
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 7124 bases
Position: chrPGUA01000569.1:124062-131185
Accession: 111836508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000020293	RRM_1	PF00076.22	1.5e-24	1	1
ENSPKIP00000020256	RRM_1	PF00076.22	1.6e-24	1	1
ENSPKIP00000020225	RRM_1	PF00076.22	1.8e-24	1	1
ENSPKIP00000020189	RRM_1	PF00076.22	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000000871	-	1761	XM_023797851	ENSPKIP00000020256	503 (aa)	XP_023653619	-
ENSPKIT00000000803	-	1884	XM_023797849	ENSPKIP00000020189	544 (aa)	XP_023653617	-
ENSPKIT00000000909	-	1380	-	ENSPKIP00000020293	459 (aa)	-	-
ENSPKIT00000000838	-	1824	XM_023797850	ENSPKIP00000020225	524 (aa)	XP_023653618	-

Gene Model

Click here to download ENSPKIG00000005033's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005033	cstf2	97	61.073	ENSG00000101811	CSTF2	87	89.744	Homo_sapiens
ENSPKIG00000005033	cstf2	93	74.899	ENSAPOG00000005630	cstf2	98	73.964	Acanthochromis_polyacanthus
ENSPKIG00000005033	cstf2	93	62.957	ENSAMEG00000002082	CSTF2	99	61.500	Ailuropoda_melanoleuca
ENSPKIG00000005033	cstf2	93	72.358	ENSACIG00000012852	cstf2	99	71.006	Amphilophus_citrinellus
ENSPKIG00000005033	cstf2	93	75.304	ENSAOCG00000020905	cstf2	99	74.213	Amphiprion_ocellaris
ENSPKIG00000005033	cstf2	93	74.899	ENSAPEG00000006526	cstf2	99	73.581	Amphiprion_percula
ENSPKIG00000005033	cstf2	93	73.320	ENSATEG00000018186	cstf2	99	72.047	Anabas_testudineus
ENSPKIG00000005033	cstf2	91	63.667	ENSAPLG00000007255	CSTF2	100	61.462	Anas_platyrhynchos
ENSPKIG00000005033	cstf2	97	60.727	ENSANAG00000022342	CSTF2	99	62.857	Aotus_nancymaae
ENSPKIG00000005033	cstf2	93	73.374	ENSACLG00000000779	cstf2	95	71.735	Astatotilapia_calliptera
ENSPKIG00000005033	cstf2	88	89.744	ENSAMXG00000021477	cstf2	99	94.737	Astyanax_mexicanus
ENSPKIG00000005033	cstf2	97	61.821	ENSBTAG00000003547	CSTF2	99	63.002	Bos_taurus
ENSPKIG00000005033	cstf2	97	60.727	ENSCJAG00000004422	CSTF2	99	62.857	Callithrix_jacchus
ENSPKIG00000005033	cstf2	97	60.832	ENSCAFG00000017551	CSTF2	99	62.609	Canis_familiaris
ENSPKIG00000005033	cstf2	93	63.561	ENSCAFG00020007619	CSTF2	99	62.689	Canis_lupus_dingo
ENSPKIG00000005033	cstf2	97	61.471	ENSCHIG00000016994	CSTF2	99	62.653	Capra_hircus
ENSPKIG00000005033	cstf2	97	61.073	ENSTSYG00000006529	CSTF2	99	62.963	Carlito_syrichta
ENSPKIG00000005033	cstf2	97	61.073	ENSCPOG00000015255	CSTF2	84	93.464	Cavia_porcellus
ENSPKIG00000005033	cstf2	97	60.727	ENSCCAG00000032975	CSTF2	99	62.857	Cebus_capucinus
ENSPKIG00000005033	cstf2	97	61.431	ENSCATG00000022835	CSTF2	99	63.240	Cercocebus_atys
ENSPKIG00000005033	cstf2	97	60.727	ENSCLAG00000001904	CSTF2	85	91.667	Chinchilla_lanigera
ENSPKIG00000005033	cstf2	93	64.120	ENSCSAG00000010360	CSTF2	99	63.193	Chlorocebus_sabaeus
ENSPKIG00000005033	cstf2	65	95.597	ENSCHOG00000012803	CSTF2	56	95.597	Choloepus_hoffmanni
ENSPKIG00000005033	cstf2	98	68.483	ENSCPBG00000014293	CSTF2	90	71.154	Chrysemys_picta_bellii
ENSPKIG00000005033	cstf2	97	61.431	ENSCANG00000030612	CSTF2	99	63.240	Colobus_angolensis_palliatus
ENSPKIG00000005033	cstf2	97	59.284	ENSCGRG00001023023	Cstf2	99	63.058	Cricetulus_griseus_chok1gshd
ENSPKIG00000005033	cstf2	97	61.376	ENSCGRG00000003897	Cstf2	99	64.769	Cricetulus_griseus_crigri
ENSPKIG00000005033	cstf2	93	74.897	ENSCVAG00000005731	cstf2	100	72.534	Cyprinodon_variegatus
ENSPKIG00000005033	cstf2	96	78.079	ENSDARG00000090788	cstf2	96	90.411	Danio_rerio
ENSPKIG00000005033	cstf2	93	65.803	ENSDORG00000007195	Cstf2	83	94.040	Dipodomys_ordii
ENSPKIG00000005033	cstf2	73	89.474	ENSETEG00000004931	CSTF2	64	89.474	Echinops_telfairi
ENSPKIG00000005033	cstf2	93	63.184	ENSEASG00005001216	CSTF2	99	62.353	Equus_asinus_asinus
ENSPKIG00000005033	cstf2	97	60.449	ENSECAG00000009325	CSTF2	99	62.353	Equus_caballus
ENSPKIG00000005033	cstf2	97	60.659	ENSFCAG00000007000	CSTF2	99	62.353	Felis_catus
ENSPKIG00000005033	cstf2	86	62.124	ENSFALG00000003859	CSTF2	100	60.746	Ficedula_albicollis
ENSPKIG00000005033	cstf2	97	61.419	ENSFDAG00000002416	CSTF2	99	62.867	Fukomys_damarensis
ENSPKIG00000005033	cstf2	93	72.407	ENSFHEG00000017065	cstf2	97	72.137	Fundulus_heteroclitus
ENSPKIG00000005033	cstf2	97	67.573	ENSGMOG00000005145	cstf2	99	68.648	Gadus_morhua
ENSPKIG00000005033	cstf2	97	60.900	ENSGALG00000006760	CSTF2	99	63.826	Gallus_gallus
ENSPKIG00000005033	cstf2	93	72.455	ENSGAFG00000020027	cstf2	100	71.456	Gambusia_affinis
ENSPKIG00000005033	cstf2	97	66.799	ENSGACG00000017326	cstf2	91	82.264	Gasterosteus_aculeatus
ENSPKIG00000005033	cstf2	97	68.571	ENSGAGG00000006037	CSTF2	93	70.476	Gopherus_agassizii
ENSPKIG00000005033	cstf2	97	61.431	ENSGGOG00000022267	CSTF2	99	63.240	Gorilla_gorilla
ENSPKIG00000005033	cstf2	93	72.782	ENSHBUG00000016183	cstf2	95	71.820	Haplochromis_burtoni
ENSPKIG00000005033	cstf2	97	60.900	ENSHGLG00000000659	-	86	90.123	Heterocephalus_glaber_female
ENSPKIG00000005033	cstf2	97	54.145	ENSHGLG00000013455	-	99	55.360	Heterocephalus_glaber_female
ENSPKIG00000005033	cstf2	97	60.900	ENSHGLG00100001130	-	86	90.123	Heterocephalus_glaber_male
ENSPKIG00000005033	cstf2	97	54.145	ENSHGLG00100015391	-	99	55.360	Heterocephalus_glaber_male
ENSPKIG00000005033	cstf2	93	71.026	ENSHCOG00000005157	cstf2	99	70.276	Hippocampus_comes
ENSPKIG00000005033	cstf2	100	73.438	ENSIPUG00000017839	cstf2	100	76.103	Ictalurus_punctatus
ENSPKIG00000005033	cstf2	97	61.257	ENSSTOG00000023445	CSTF2	85	91.667	Ictidomys_tridecemlineatus
ENSPKIG00000005033	cstf2	97	60.938	ENSJJAG00000020507	Cstf2	85	91.667	Jaculus_jaculus
ENSPKIG00000005033	cstf2	95	72.441	ENSKMAG00000001068	cstf2	98	73.653	Kryptolebias_marmoratus
ENSPKIG00000005033	cstf2	61	96.610	ENSLBEG00000028720	cstf2	89	87.324	Labrus_bergylta
ENSPKIG00000005033	cstf2	93	63.025	ENSLACG00000015927	CSTF2	99	60.477	Latimeria_chalumnae
ENSPKIG00000005033	cstf2	99	96.226	ENSLOCG00000015300	cstf2	80	98.039	Lepisosteus_oculatus
ENSPKIG00000005033	cstf2	97	61.217	ENSLAFG00000000474	CSTF2	99	62.521	Loxodonta_africana
ENSPKIG00000005033	cstf2	97	61.431	ENSMFAG00000043888	CSTF2	99	63.240	Macaca_fascicularis
ENSPKIG00000005033	cstf2	93	64.657	ENSMMUG00000013008	CSTF2	99	63.300	Macaca_mulatta
ENSPKIG00000005033	cstf2	97	61.073	ENSMNEG00000041824	CSTF2	99	63.300	Macaca_nemestrina
ENSPKIG00000005033	cstf2	97	61.431	ENSMLEG00000036870	CSTF2	99	63.240	Mandrillus_leucophaeus
ENSPKIG00000005033	cstf2	90	71.843	ENSMAMG00000020364	cstf2	96	72.349	Mastacembelus_armatus
ENSPKIG00000005033	cstf2	93	73.374	ENSMZEG00005007200	cstf2	98	72.584	Maylandia_zebra
ENSPKIG00000005033	cstf2	83	90.566	ENSMGAG00000004139	CSTF2	85	91.228	Meleagris_gallopavo
ENSPKIG00000005033	cstf2	97	59.114	ENSMAUG00000000965	Cstf2	99	62.715	Mesocricetus_auratus
ENSPKIG00000005033	cstf2	93	65.345	ENSMICG00000014121	CSTF2	99	63.131	Microcebus_murinus
ENSPKIG00000005033	cstf2	97	60.137	ENSMOCG00000008081	Cstf2	99	63.432	Microtus_ochrogaster
ENSPKIG00000005033	cstf2	81	94.500	ENSMMOG00000000538	cstf2	99	66.320	Mola_mola
ENSPKIG00000005033	cstf2	94	64.746	ENSMODG00000011785	CSTF2	99	64.516	Monodelphis_domestica
ENSPKIG00000005033	cstf2	97	59.284	MGP_CAROLIEiJ_G0033383	Cstf2	84	92.258	Mus_caroli
ENSPKIG00000005033	cstf2	97	59.284	ENSMUSG00000031256	Cstf2	84	92.258	Mus_musculus
ENSPKIG00000005033	cstf2	97	59.386	MGP_PahariEiJ_G0031923	Cstf2	88	78.519	Mus_pahari
ENSPKIG00000005033	cstf2	97	59.284	MGP_SPRETEiJ_G0034548	Cstf2	84	92.258	Mus_spretus
ENSPKIG00000005033	cstf2	93	60.635	ENSMPUG00000002339	CSTF2	99	58.861	Mustela_putorius_furo
ENSPKIG00000005033	cstf2	93	61.137	ENSMLUG00000004598	CSTF2	83	81.496	Myotis_lucifugus
ENSPKIG00000005033	cstf2	97	60.136	ENSNGAG00000021985	Cstf2	99	62.522	Nannospalax_galili
ENSPKIG00000005033	cstf2	93	63.410	ENSNBRG00000021694	cstf2	100	67.850	Neolamprologus_brichardi
ENSPKIG00000005033	cstf2	97	61.431	ENSNLEG00000007510	CSTF2	99	63.240	Nomascus_leucogenys
ENSPKIG00000005033	cstf2	98	61.413	ENSMEUG00000007875	-	99	64.685	Notamacropus_eugenii
ENSPKIG00000005033	cstf2	98	62.681	ENSMEUG00000011186	-	99	66.126	Notamacropus_eugenii
ENSPKIG00000005033	cstf2	84	64.683	ENSMEUG00000014025	-	100	62.897	Notamacropus_eugenii
ENSPKIG00000005033	cstf2	82	79.006	ENSOPRG00000003106	CSTF2	84	74.879	Ochotona_princeps
ENSPKIG00000005033	cstf2	97	60.727	ENSODEG00000002059	CSTF2	99	62.349	Octodon_degus
ENSPKIG00000005033	cstf2	85	87.295	ENSONIG00000002631	cstf2	85	82.353	Oreochromis_niloticus
ENSPKIG00000005033	cstf2	87	90.196	ENSOANG00000004208	CSTF2	83	90.385	Ornithorhynchus_anatinus
ENSPKIG00000005033	cstf2	97	61.419	ENSOCUG00000010468	CSTF2	99	62.957	Oryctolagus_cuniculus
ENSPKIG00000005033	cstf2	92	72.561	ENSORLG00000001380	cstf2	98	71.230	Oryzias_latipes
ENSPKIG00000005033	cstf2	92	72.967	ENSORLG00020021917	cstf2	98	71.230	Oryzias_latipes_hni
ENSPKIG00000005033	cstf2	92	72.358	ENSORLG00015011996	cstf2	98	71.230	Oryzias_latipes_hsok
ENSPKIG00000005033	cstf2	92	73.523	ENSOMEG00000015507	cstf2	98	72.134	Oryzias_melastigma
ENSPKIG00000005033	cstf2	93	61.014	ENSOGAG00000011192	CSTF2	99	59.236	Otolemur_garnettii
ENSPKIG00000005033	cstf2	97	61.471	ENSOARG00000001022	CSTF2	99	62.653	Ovis_aries
ENSPKIG00000005033	cstf2	97	61.431	ENSPPAG00000031804	CSTF2	99	63.240	Pan_paniscus
ENSPKIG00000005033	cstf2	97	60.659	ENSPPRG00000022492	CSTF2	99	62.353	Panthera_pardus
ENSPKIG00000005033	cstf2	97	60.312	ENSPTIG00000009922	CSTF2	99	62.017	Panthera_tigris_altaica
ENSPKIG00000005033	cstf2	97	61.431	ENSPTRG00000022090	CSTF2	99	63.240	Pan_troglodytes
ENSPKIG00000005033	cstf2	97	61.431	ENSPANG00000002303	CSTF2	99	63.240	Papio_anubis
ENSPKIG00000005033	cstf2	93	73.684	ENSPMGG00000006534	cstf2	98	73.913	Periophthalmus_magnuspinnatus
ENSPKIG00000005033	cstf2	97	59.625	ENSPEMG00000019415	Cstf2	99	62.715	Peromyscus_maniculatus_bairdii
ENSPKIG00000005033	cstf2	94	65.261	ENSPCIG00000002989	CSTF2	99	63.729	Phascolarctos_cinereus
ENSPKIG00000005033	cstf2	93	71.513	ENSPLAG00000011176	cstf2	100	69.663	Poecilia_latipinna
ENSPKIG00000005033	cstf2	93	71.906	ENSPMEG00000017743	cstf2	100	69.737	Poecilia_mexicana
ENSPKIG00000005033	cstf2	63	76.488	ENSPREG00000011481	cstf2	100	66.667	Poecilia_reticulata
ENSPKIG00000005033	cstf2	93	64.120	ENSPPYG00000020541	CSTF2	99	63.193	Pongo_abelii
ENSPKIG00000005033	cstf2	97	61.391	ENSPCOG00000027744	CSTF2	99	62.963	Propithecus_coquereli
ENSPKIG00000005033	cstf2	94	47.153	ENSPVAG00000008342	CSTF2	100	48.582	Pteropus_vampyrus
ENSPKIG00000005033	cstf2	53	93.151	ENSPNYG00000010852	cstf2	97	86.747	Pundamilia_nyererei
ENSPKIG00000005033	cstf2	93	79.127	ENSPNAG00000018887	cstf2	100	78.664	Pygocentrus_nattereri
ENSPKIG00000005033	cstf2	97	59.966	ENSRNOG00000048025	Cstf2	99	63.432	Rattus_norvegicus
ENSPKIG00000005033	cstf2	97	61.228	ENSRBIG00000030745	CSTF2	99	63.287	Rhinopithecus_bieti
ENSPKIG00000005033	cstf2	97	61.431	ENSRROG00000045042	CSTF2	99	63.240	Rhinopithecus_roxellana
ENSPKIG00000005033	cstf2	97	60.727	ENSSBOG00000021649	CSTF2	99	62.857	Saimiri_boliviensis_boliviensis
ENSPKIG00000005033	cstf2	89	88.235	ENSSHAG00000003681	CSTF2	83	88.462	Sarcophilus_harrisii
ENSPKIG00000005033	cstf2	93	91.506	ENSSFOG00015006348	cstf2	100	91.132	Scleropages_formosus
ENSPKIG00000005033	cstf2	92	72.967	ENSSMAG00000013463	cstf2	98	72.584	Scophthalmus_maximus
ENSPKIG00000005033	cstf2	97	59.406	ENSSPUG00000005288	-	99	63.230	Sphenodon_punctatus
ENSPKIG00000005033	cstf2	97	61.121	ENSSSCG00000012486	CSTF2	99	62.226	Sus_scrofa
ENSPKIG00000005033	cstf2	93	64.395	ENSTGUG00000002253	CSTF2	99	63.419	Taeniopygia_guttata
ENSPKIG00000005033	cstf2	97	68.738	ENSTNIG00000016860	cstf2	99	72.115	Tetraodon_nigroviridis
ENSPKIG00000005033	cstf2	56	98.780	ENSTBEG00000010029	-	69	98.780	Tupaia_belangeri
ENSPKIG00000005033	cstf2	97	60.243	ENSTTRG00000013556	CSTF2	99	62.021	Tursiops_truncatus
ENSPKIG00000005033	cstf2	97	60.137	ENSUAMG00000026605	CSTF2	99	61.589	Ursus_americanus
ENSPKIG00000005033	cstf2	97	64.140	ENSUMAG00000012417	CSTF2	98	75.704	Ursus_maritimus
ENSPKIG00000005033	cstf2	76	71.810	ENSVPAG00000006466	CSTF2	68	73.512	Vicugna_pacos
ENSPKIG00000005033	cstf2	97	60.832	ENSVVUG00000004717	CSTF2	99	62.609	Vulpes_vulpes
ENSPKIG00000005033	cstf2	92	92.453	ENSXETG00000009642	cstf2	84	92.982	Xenopus_tropicalis
ENSPKIG00000005033	cstf2	69	98.485	ENSXCOG00000016436	cstf2	98	85.882	Xiphophorus_couchianus
ENSPKIG00000005033	cstf2	61	80.323	ENSXMAG00000013524	cstf2	100	67.446	Xiphophorus_maculatus