EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000005037 (Gene tree)
Gene ID: 111853082
Gene Symbol: rbm47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 31623 bases
Position: chrPGUA01000026.1:3514187-3545809
Accession: 111853082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000020154	RRM_1	PF00076.22	9.8e-41	1	3
ENSPKIP00000020154	RRM_1	PF00076.22	9.8e-41	2	3
ENSPKIP00000020154	RRM_1	PF00076.22	9.8e-41	3	3
ENSPKIP00000020165	RRM_1	PF00076.22	1.3e-40	1	3
ENSPKIP00000020165	RRM_1	PF00076.22	1.3e-40	2	3
ENSPKIP00000020165	RRM_1	PF00076.22	1.3e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000000767	-	6062	-	ENSPKIP00000020154	593 (aa)	XP_023685385	UPI000CD5E7CB
ENSPKIT00000000778	-	5644	-	ENSPKIP00000020165	629 (aa)	XP_023685384	UPI000CD65887

Gene Model

Click here to download ENSPKIG00000005037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000005037	rbm47	69	30.625	ENSPKIG00000010833	celf3a	75	30.625
ENSPKIG00000005037	rbm47	51	53.896	ENSPKIG00000017610	syncripl	57	52.134
ENSPKIG00000005037	rbm47	78	52.642	ENSPKIG00000025176	a1cf	90	51.920
ENSPKIG00000005037	rbm47	56	66.566	ENSPKIG00000015334	rbm46	54	69.935
ENSPKIG00000005037	rbm47	95	77.312	ENSPKIG00000013431	RBM47	99	80.037
ENSPKIG00000005037	rbm47	51	54.545	ENSPKIG00000020066	SYNCRIP	55	54.545
ENSPKIG00000005037	rbm47	51	56.169	ENSPKIG00000007341	hnrnpr	50	56.169
ENSPKIG00000005037	rbm47	51	55.844	ENSPKIG00000000757	HNRNPR	65	48.395

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005037	rbm47	95	84.225	ENSG00000163694	RBM47	90	89.796	Homo_sapiens
ENSPKIG00000005037	rbm47	100	84.103	ENSAPOG00000011062	rbm47	97	88.451	Acanthochromis_polyacanthus
ENSPKIG00000005037	rbm47	95	75.043	ENSAMEG00000009672	RBM47	96	76.990	Ailuropoda_melanoleuca
ENSPKIG00000005037	rbm47	100	77.980	ENSACIG00000011531	rbm47	97	80.936	Amphilophus_citrinellus
ENSPKIG00000005037	rbm47	100	83.846	ENSAOCG00000022245	rbm47	95	87.535	Amphiprion_ocellaris
ENSPKIG00000005037	rbm47	100	83.846	ENSAPEG00000018304	rbm47	95	87.535	Amphiprion_percula
ENSPKIG00000005037	rbm47	100	78.947	ENSATEG00000018400	rbm47	95	87.744	Anabas_testudineus
ENSPKIG00000005037	rbm47	100	73.632	ENSAPLG00000013974	RBM47	96	76.307	Anas_platyrhynchos
ENSPKIG00000005037	rbm47	100	73.684	ENSACAG00000011833	RBM47	96	75.559	Anolis_carolinensis
ENSPKIG00000005037	rbm47	100	81.299	ENSANAG00000029440	RBM47	90	86.119	Aotus_nancymaae
ENSPKIG00000005037	rbm47	100	85.492	ENSACLG00000016902	rbm47	96	88.579	Astatotilapia_calliptera
ENSPKIG00000005037	rbm47	100	79.373	ENSAMXG00000021794	rbm47	95	89.577	Astyanax_mexicanus
ENSPKIG00000005037	rbm47	100	75.788	ENSBTAG00000002356	RBM47	96	78.360	Bos_taurus
ENSPKIG00000005037	rbm47	95	84.507	ENSCJAG00000019385	RBM47	90	85.836	Callithrix_jacchus
ENSPKIG00000005037	rbm47	95	75.131	ENSCAFG00000015898	RBM47	96	77.972	Canis_familiaris
ENSPKIG00000005037	rbm47	82	83.099	ENSCAFG00020010558	RBM47	89	85.836	Canis_lupus_dingo
ENSPKIG00000005037	rbm47	100	75.622	ENSCHIG00000026214	RBM47	96	78.185	Capra_hircus
ENSPKIG00000005037	rbm47	85	86.547	ENSTSYG00000033612	RBM47	93	85.398	Carlito_syrichta
ENSPKIG00000005037	rbm47	100	73.057	ENSCAPG00000008426	RBM47	96	76.487	Cavia_aperea
ENSPKIG00000005037	rbm47	100	80.879	ENSCPOG00000014100	RBM47	96	85.876	Cavia_porcellus
ENSPKIG00000005037	rbm47	100	81.984	ENSCCAG00000030129	-	90	85.552	Cebus_capucinus
ENSPKIG00000005037	rbm47	99	53.422	ENSCCAG00000024397	-	95	54.657	Cebus_capucinus
ENSPKIG00000005037	rbm47	95	84.225	ENSCATG00000042064	RBM47	90	85.836	Cercocebus_atys
ENSPKIG00000005037	rbm47	100	80.519	ENSCLAG00000001684	RBM47	96	85.876	Chinchilla_lanigera
ENSPKIG00000005037	rbm47	95	76.522	ENSCSAG00000017060	RBM47	96	77.391	Chlorocebus_sabaeus
ENSPKIG00000005037	rbm47	84	76.066	ENSCHOG00000011731	RBM47	84	78.199	Choloepus_hoffmanni
ENSPKIG00000005037	rbm47	100	75.658	ENSCPBG00000013831	RBM47	96	77.682	Chrysemys_picta_bellii
ENSPKIG00000005037	rbm47	95	84.225	ENSCANG00000019997	RBM47	90	85.552	Colobus_angolensis_palliatus
ENSPKIG00000005037	rbm47	100	79.793	ENSCGRG00001000623	-	96	76.134	Cricetulus_griseus_chok1gshd
ENSPKIG00000005037	rbm47	100	74.419	ENSCGRG00001020102	-	96	73.161	Cricetulus_griseus_chok1gshd
ENSPKIG00000005037	rbm47	100	74.160	ENSCGRG00000014760	-	96	73.161	Cricetulus_griseus_crigri
ENSPKIG00000005037	rbm47	100	72.414	ENSCGRG00000007762	-	87	88.321	Cricetulus_griseus_crigri
ENSPKIG00000005037	rbm47	95	77.123	ENSCSEG00000004545	rbm47	97	77.990	Cynoglossus_semilaevis
ENSPKIG00000005037	rbm47	100	78.560	ENSCVAG00000020144	rbm47	97	81.043	Cyprinodon_variegatus
ENSPKIG00000005037	rbm47	100	79.139	ENSDARG00000061985	rbm47	95	80.911	Danio_rerio
ENSPKIG00000005037	rbm47	95	76.274	ENSDNOG00000046854	RBM47	96	77.680	Dasypus_novemcinctus
ENSPKIG00000005037	rbm47	100	74.548	ENSDORG00000010144	Rbm47	96	76.857	Dipodomys_ordii
ENSPKIG00000005037	rbm47	96	75.559	ENSETEG00000009194	RBM47	97	76.420	Echinops_telfairi
ENSPKIG00000005037	rbm47	94	59.201	ENSEBUG00000011912	rbm47	95	60.140	Eptatretus_burgeri
ENSPKIG00000005037	rbm47	95	77.138	ENSEASG00005008443	RBM47	96	77.836	Equus_asinus_asinus
ENSPKIG00000005037	rbm47	95	77.138	ENSECAG00000004400	RBM47	96	77.836	Equus_caballus
ENSPKIG00000005037	rbm47	71	88.517	ENSEEUG00000001194	RBM47	72	89.952	Erinaceus_europaeus
ENSPKIG00000005037	rbm47	100	77.941	ENSELUG00000006148	rbm47	93	88.643	Esox_lucius
ENSPKIG00000005037	rbm47	95	77.583	ENSFCAG00000012399	RBM47	96	78.284	Felis_catus
ENSPKIG00000005037	rbm47	100	74.465	ENSFALG00000002861	RBM47	96	76.776	Ficedula_albicollis
ENSPKIG00000005037	rbm47	100	79.373	ENSFDAG00000016326	RBM47	97	75.692	Fukomys_damarensis
ENSPKIG00000005037	rbm47	100	78.053	ENSFHEG00000007938	rbm47	98	80.139	Fundulus_heteroclitus
ENSPKIG00000005037	rbm47	100	75.566	ENSGMOG00000014802	rbm47	94	77.911	Gadus_morhua
ENSPKIG00000005037	rbm47	64	80.829	ENSGALG00000014267	RBM47	94	86.197	Gallus_gallus
ENSPKIG00000005037	rbm47	64	84.856	ENSGAFG00000020571	rbm47	94	89.014	Gambusia_affinis
ENSPKIG00000005037	rbm47	100	76.316	ENSGACG00000016223	rbm47	93	87.288	Gasterosteus_aculeatus
ENSPKIG00000005037	rbm47	100	75.658	ENSGAGG00000020051	RBM47	96	77.682	Gopherus_agassizii
ENSPKIG00000005037	rbm47	95	84.225	ENSGGOG00000001367	RBM47	90	85.836	Gorilla_gorilla
ENSPKIG00000005037	rbm47	100	85.492	ENSHBUG00000003520	rbm47	96	88.579	Haplochromis_burtoni
ENSPKIG00000005037	rbm47	86	61.616	ENSHGLG00000016914	RBM47	90	84.507	Heterocephalus_glaber_female
ENSPKIG00000005037	rbm47	100	67.333	ENSHGLG00100003071	-	97	68.403	Heterocephalus_glaber_male
ENSPKIG00000005037	rbm47	100	80.418	ENSHGLG00100014028	-	90	84.507	Heterocephalus_glaber_male
ENSPKIG00000005037	rbm47	99	77.462	ENSHCOG00000002074	rbm47	95	81.239	Hippocampus_comes
ENSPKIG00000005037	rbm47	100	79.568	ENSIPUG00000004743	rbm47	97	90.517	Ictalurus_punctatus
ENSPKIG00000005037	rbm47	100	78.182	ENSSTOG00000004727	RBM47	96	77.668	Ictidomys_tridecemlineatus
ENSPKIG00000005037	rbm47	95	76.562	ENSJJAG00000013823	Rbm47	96	77.604	Jaculus_jaculus
ENSPKIG00000005037	rbm47	100	83.120	ENSKMAG00000000084	rbm47	96	81.882	Kryptolebias_marmoratus
ENSPKIG00000005037	rbm47	100	77.870	ENSLBEG00000008436	rbm47	92	87.288	Labrus_bergylta
ENSPKIG00000005037	rbm47	100	77.575	ENSLACG00000007196	RBM47	96	79.232	Latimeria_chalumnae
ENSPKIG00000005037	rbm47	100	80.634	ENSLOCG00000012966	rbm47	92	82.807	Lepisosteus_oculatus
ENSPKIG00000005037	rbm47	100	73.826	ENSLAFG00000011998	RBM47	97	76.562	Loxodonta_africana
ENSPKIG00000005037	rbm47	95	84.225	ENSMFAG00000037967	RBM47	90	85.836	Macaca_fascicularis
ENSPKIG00000005037	rbm47	95	76.522	ENSMMUG00000012036	RBM47	89	88.372	Macaca_mulatta
ENSPKIG00000005037	rbm47	95	84.507	ENSMNEG00000040774	RBM47	90	85.836	Macaca_nemestrina
ENSPKIG00000005037	rbm47	95	87.075	ENSMLEG00000041432	RBM47	97	88.095	Mandrillus_leucophaeus
ENSPKIG00000005037	rbm47	100	85.271	ENSMAMG00000019143	rbm47	95	88.301	Mastacembelus_armatus
ENSPKIG00000005037	rbm47	100	85.492	ENSMZEG00005023659	rbm47	96	88.579	Maylandia_zebra
ENSPKIG00000005037	rbm47	100	74.098	ENSMGAG00000012226	RBM47	96	76.724	Meleagris_gallopavo
ENSPKIG00000005037	rbm47	100	79.845	ENSMAUG00000006493	Rbm47	87	89.051	Mesocricetus_auratus
ENSPKIG00000005037	rbm47	95	84.091	ENSMICG00000026417	RBM47	96	79.757	Microcebus_murinus
ENSPKIG00000005037	rbm47	100	79.793	ENSMOCG00000021170	Rbm47	87	88.321	Microtus_ochrogaster
ENSPKIG00000005037	rbm47	100	79.868	ENSMMOG00000007260	rbm47	95	82.056	Mola_mola
ENSPKIG00000005037	rbm47	53	76.324	ENSMODG00000015426	-	100	76.324	Monodelphis_domestica
ENSPKIG00000005037	rbm47	100	76.159	ENSMODG00000007003	RBM47	96	78.049	Monodelphis_domestica
ENSPKIG00000005037	rbm47	100	70.184	ENSMODG00000020561	-	96	73.158	Monodelphis_domestica
ENSPKIG00000005037	rbm47	100	78.536	ENSMALG00000005167	rbm47	97	80.977	Monopterus_albus
ENSPKIG00000005037	rbm47	100	79.793	MGP_CAROLIEiJ_G0027258	Rbm47	87	87.591	Mus_caroli
ENSPKIG00000005037	rbm47	100	80.052	ENSMUSG00000070780	Rbm47	87	87.591	Mus_musculus
ENSPKIG00000005037	rbm47	100	79.793	MGP_PahariEiJ_G0017040	Rbm47	87	87.591	Mus_pahari
ENSPKIG00000005037	rbm47	100	80.052	MGP_SPRETEiJ_G0028253	Rbm47	87	87.591	Mus_spretus
ENSPKIG00000005037	rbm47	95	76.000	ENSMPUG00000006177	RBM47	91	77.565	Mustela_putorius_furo
ENSPKIG00000005037	rbm47	100	75.868	ENSMLUG00000000889	RBM47	96	78.360	Myotis_lucifugus
ENSPKIG00000005037	rbm47	100	73.641	ENSNGAG00000003325	Rbm47	96	76.603	Nannospalax_galili
ENSPKIG00000005037	rbm47	100	77.288	ENSNBRG00000015092	rbm47	96	88.022	Neolamprologus_brichardi
ENSPKIG00000005037	rbm47	95	84.225	ENSNLEG00000017151	RBM47	90	85.836	Nomascus_leucogenys
ENSPKIG00000005037	rbm47	71	79.433	ENSMEUG00000009516	-	99	79.433	Notamacropus_eugenii
ENSPKIG00000005037	rbm47	75	85.000	ENSOPRG00000016507	-	71	85.000	Ochotona_princeps
ENSPKIG00000005037	rbm47	100	73.754	ENSODEG00000004873	RBM47	96	77.138	Octodon_degus
ENSPKIG00000005037	rbm47	100	77.578	ENSONIG00000009061	rbm47	95	87.744	Oreochromis_niloticus
ENSPKIG00000005037	rbm47	100	75.960	ENSOANG00000008978	RBM47	96	78.246	Ornithorhynchus_anatinus
ENSPKIG00000005037	rbm47	100	74.376	ENSOCUG00000012034	RBM47	96	77.797	Oryctolagus_cuniculus
ENSPKIG00000005037	rbm47	100	84.615	ENSORLG00000005847	rbm47	94	89.045	Oryzias_latipes
ENSPKIG00000005037	rbm47	100	84.615	ENSORLG00020005154	rbm47	94	89.045	Oryzias_latipes_hni
ENSPKIG00000005037	rbm47	100	84.615	ENSORLG00015000066	rbm47	94	89.045	Oryzias_latipes_hsok
ENSPKIG00000005037	rbm47	100	79.703	ENSOMEG00000010730	rbm47	97	82.024	Oryzias_melastigma
ENSPKIG00000005037	rbm47	95	76.522	ENSOGAG00000029367	-	96	77.565	Otolemur_garnettii
ENSPKIG00000005037	rbm47	100	68.614	ENSOGAG00000025193	-	96	72.680	Otolemur_garnettii
ENSPKIG00000005037	rbm47	100	67.330	ENSOARG00000012711	RBM47	96	70.506	Ovis_aries
ENSPKIG00000005037	rbm47	95	77.329	ENSPPAG00000029763	RBM47	90	85.836	Pan_paniscus
ENSPKIG00000005037	rbm47	95	83.889	ENSPPRG00000012873	RBM47	96	84.722	Panthera_pardus
ENSPKIG00000005037	rbm47	84	74.600	ENSPTIG00000017046	RBM47	100	75.400	Panthera_tigris_altaica
ENSPKIG00000005037	rbm47	95	84.225	ENSPTRG00000016006	RBM47	90	85.836	Pan_troglodytes
ENSPKIG00000005037	rbm47	95	84.225	ENSPANG00000005980	RBM47	90	85.836	Papio_anubis
ENSPKIG00000005037	rbm47	89	77.551	ENSPSIG00000017516	RBM47	93	79.764	Pelodiscus_sinensis
ENSPKIG00000005037	rbm47	95	79.685	ENSPMGG00000018540	rbm47	97	80.560	Periophthalmus_magnuspinnatus
ENSPKIG00000005037	rbm47	100	79.793	ENSPEMG00000011088	Rbm47	96	77.075	Peromyscus_maniculatus_bairdii
ENSPKIG00000005037	rbm47	100	78.571	ENSPFOG00000007997	rbm47	95	80.717	Poecilia_formosa
ENSPKIG00000005037	rbm47	100	78.699	ENSPLAG00000002072	rbm47	97	82.249	Poecilia_latipinna
ENSPKIG00000005037	rbm47	100	79.242	ENSPMEG00000017492	rbm47	98	81.552	Poecilia_mexicana
ENSPKIG00000005037	rbm47	100	79.024	ENSPREG00000008456	rbm47	97	82.643	Poecilia_reticulata
ENSPKIG00000005037	rbm47	95	67.586	ENSPPYG00000014688	RBM47	98	68.103	Pongo_abelii
ENSPKIG00000005037	rbm47	82	78.431	ENSPCAG00000011879	RBM47	77	83.905	Procavia_capensis
ENSPKIG00000005037	rbm47	95	84.225	ENSPCOG00000023451	RBM47	96	85.552	Propithecus_coquereli
ENSPKIG00000005037	rbm47	100	74.050	ENSPVAG00000003812	RBM47	96	77.604	Pteropus_vampyrus
ENSPKIG00000005037	rbm47	100	77.362	ENSPNYG00000022868	rbm47	96	88.579	Pundamilia_nyererei
ENSPKIG00000005037	rbm47	100	80.033	ENSPNAG00000007940	rbm47	95	89.916	Pygocentrus_nattereri
ENSPKIG00000005037	rbm47	100	73.267	ENSRNOG00000002408	Rbm47	96	76.870	Rattus_norvegicus
ENSPKIG00000005037	rbm47	95	84.225	ENSRBIG00000039601	RBM47	90	85.552	Rhinopithecus_bieti
ENSPKIG00000005037	rbm47	95	84.225	ENSRROG00000044696	RBM47	90	85.552	Rhinopithecus_roxellana
ENSPKIG00000005037	rbm47	100	74.161	ENSSBOG00000028475	RBM47	92	85.475	Saimiri_boliviensis_boliviensis
ENSPKIG00000005037	rbm47	100	75.914	ENSSHAG00000017576	RBM47	96	77.972	Sarcophilus_harrisii
ENSPKIG00000005037	rbm47	99	77.365	ENSSFOG00015024101	RBM47	97	78.510	Scleropages_formosus
ENSPKIG00000005037	rbm47	100	81.864	ENSSFOG00015012445	rbm47	87	91.944	Scleropages_formosus
ENSPKIG00000005037	rbm47	100	78.418	ENSSMAG00000009744	rbm47	96	80.000	Scophthalmus_maximus
ENSPKIG00000005037	rbm47	100	80.066	ENSSDUG00000022684	rbm47	97	82.087	Seriola_dumerili
ENSPKIG00000005037	rbm47	100	79.900	ENSSLDG00000003109	rbm47	92	89.296	Seriola_lalandi_dorsalis
ENSPKIG00000005037	rbm47	85	78.509	ENSSARG00000001735	RBM47	81	82.904	Sorex_araneus
ENSPKIG00000005037	rbm47	100	80.990	ENSSPUG00000007515	RBM47	96	85.552	Sphenodon_punctatus
ENSPKIG00000005037	rbm47	100	84.478	ENSSPAG00000001257	rbm47	94	89.296	Stegastes_partitus
ENSPKIG00000005037	rbm47	95	83.754	ENSSSCG00000008796	RBM47	96	78.010	Sus_scrofa
ENSPKIG00000005037	rbm47	100	74.257	ENSTGUG00000008705	RBM47	96	76.562	Taeniopygia_guttata
ENSPKIG00000005037	rbm47	100	78.167	ENSTRUG00000014050	rbm47	99	80.035	Takifugu_rubripes
ENSPKIG00000005037	rbm47	100	79.669	ENSTNIG00000006127	rbm47	95	81.675	Tetraodon_nigroviridis
ENSPKIG00000005037	rbm47	73	83.569	ENSTBEG00000001607	RBM47	73	83.569	Tupaia_belangeri
ENSPKIG00000005037	rbm47	95	77.933	ENSTTRG00000002839	RBM47	96	78.634	Tursiops_truncatus
ENSPKIG00000005037	rbm47	95	77.043	ENSUAMG00000021346	RBM47	96	77.739	Ursus_americanus
ENSPKIG00000005037	rbm47	52	84.000	ENSVPAG00000000641	-	53	86.400	Vicugna_pacos
ENSPKIG00000005037	rbm47	95	76.532	ENSVVUG00000014774	RBM47	96	77.583	Vulpes_vulpes
ENSPKIG00000005037	rbm47	100	74.503	ENSXETG00000012802	rbm47	87	86.275	Xenopus_tropicalis
ENSPKIG00000005037	rbm47	100	84.817	ENSXCOG00000000780	rbm47	97	81.980	Xiphophorus_couchianus
ENSPKIG00000005037	rbm47	100	84.143	ENSXMAG00000009874	rbm47	98	81.282	Xiphophorus_maculatus