EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000005048 (Gene tree)
Gene ID: 111860126
Gene Symbol: -
Alias: -
Full Name: splicing factor 45-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 15265 bases
Position: chrPGUA01000400.1:90690-105954
Accession: 111860126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000020203	RRM_1	PF00076.22	2.9e-05	1	1
ENSPKIP00000020174	RRM_1	PF00076.22	3.5e-05	1	1
ENSPKIP00000020203	G-patch	PF01585.23	1.1e-12	1	1
ENSPKIP00000020210	G-patch	PF01585.23	1.2e-12	1	1
ENSPKIP00000020174	G-patch	PF01585.23	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000000817	-	1176	-	ENSPKIP00000020203	391 (aa)	-	-
ENSPKIT00000000824	-	3026	-	ENSPKIP00000020210	400 (aa)	-	-
ENSPKIT00000000787	-	2702	-	ENSPKIP00000020174	426 (aa)	XP_023699261	UPI000CD62874

Gene Model

Click here to download ENSPKIG00000005048's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000005048	-	100	82.670	ENSPKIG00000025526	rbm17	100	82.243

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005048	-	100	77.700	ENSG00000134453	RBM17	100	77.700	Homo_sapiens
ENSPKIG00000005048	-	99	80.000	ENSAPOG00000007101	rbm17	99	78.588	Acanthochromis_polyacanthus
ENSPKIG00000005048	-	100	77.934	ENSAMEG00000002107	RBM17	100	77.934	Ailuropoda_melanoleuca
ENSPKIG00000005048	-	100	77.641	ENSACIG00000006251	rbm17	100	77.641	Amphilophus_citrinellus
ENSPKIG00000005048	-	100	79.953	ENSAOCG00000014892	rbm17	100	78.555	Amphiprion_ocellaris
ENSPKIG00000005048	-	100	79.953	ENSAPEG00000022779	rbm17	100	78.555	Amphiprion_percula
ENSPKIG00000005048	-	100	78.960	ENSATEG00000004406	rbm17	100	77.228	Anabas_testudineus
ENSPKIG00000005048	-	100	76.995	ENSAPLG00000004190	RBM17	100	76.995	Anas_platyrhynchos
ENSPKIG00000005048	-	90	73.333	ENSACAG00000005418	RBM17	99	73.333	Anolis_carolinensis
ENSPKIG00000005048	-	100	72.040	ENSANAG00000019330	-	95	81.897	Aotus_nancymaae
ENSPKIG00000005048	-	100	77.934	ENSANAG00000030127	RBM17	95	85.593	Aotus_nancymaae
ENSPKIG00000005048	-	100	78.195	ENSACLG00000003928	rbm17	100	79.699	Astatotilapia_calliptera
ENSPKIG00000005048	-	100	80.374	ENSAMXG00000005853	rbm17	100	80.841	Astyanax_mexicanus
ENSPKIG00000005048	-	100	75.822	ENSBTAG00000011094	-	100	75.822	Bos_taurus
ENSPKIG00000005048	-	100	77.230	ENSBTAG00000021951	RBM17	100	77.230	Bos_taurus
ENSPKIG00000005048	-	76	32.121	WBGene00010233	F58B3.7	92	31.579	Caenorhabditis_elegans
ENSPKIG00000005048	-	100	79.241	ENSCJAG00000020573	RBM17	100	79.241	Callithrix_jacchus
ENSPKIG00000005048	-	100	77.934	ENSCAFG00000005206	RBM17	100	77.934	Canis_familiaris
ENSPKIG00000005048	-	100	78.827	ENSCAFG00020005420	RBM17	100	77.387	Canis_lupus_dingo
ENSPKIG00000005048	-	100	77.230	ENSCHIG00000023204	-	100	77.494	Capra_hircus
ENSPKIG00000005048	-	100	75.117	ENSCHIG00000019921	-	100	75.117	Capra_hircus
ENSPKIG00000005048	-	100	78.404	ENSTSYG00000001165	RBM17	99	84.746	Carlito_syrichta
ENSPKIG00000005048	-	90	64.067	ENSCAPG00000006275	RBM17	100	64.507	Cavia_aperea
ENSPKIG00000005048	-	100	76.650	ENSCPOG00000005679	RBM17	99	77.411	Cavia_porcellus
ENSPKIG00000005048	-	100	77.934	ENSCCAG00000018655	RBM17	95	85.593	Cebus_capucinus
ENSPKIG00000005048	-	100	77.700	ENSCATG00000041566	RBM17	95	85.593	Cercocebus_atys
ENSPKIG00000005048	-	100	78.169	ENSCLAG00000012195	RBM17	99	78.169	Chinchilla_lanigera
ENSPKIG00000005048	-	100	77.700	ENSCSAG00000013564	RBM17	100	77.700	Chlorocebus_sabaeus
ENSPKIG00000005048	-	98	61.832	ENSCHOG00000005131	RBM17	100	62.025	Choloepus_hoffmanni
ENSPKIG00000005048	-	100	76.526	ENSCPBG00000019836	RBM17	100	76.526	Chrysemys_picta_bellii
ENSPKIG00000005048	-	100	43.418	ENSCSAVG00000008782	-	100	42.237	Ciona_savignyi
ENSPKIG00000005048	-	98	68.668	ENSCANG00000023715	-	100	68.668	Colobus_angolensis_palliatus
ENSPKIG00000005048	-	100	77.465	ENSCANG00000030987	RBM17	95	85.593	Colobus_angolensis_palliatus
ENSPKIG00000005048	-	100	78.404	ENSCGRG00001013842	Rbm17	100	78.404	Cricetulus_griseus_chok1gshd
ENSPKIG00000005048	-	100	61.596	ENSCGRG00001009256	-	100	59.950	Cricetulus_griseus_chok1gshd
ENSPKIG00000005048	-	100	78.404	ENSCGRG00000006907	Rbm17	100	78.404	Cricetulus_griseus_crigri
ENSPKIG00000005048	-	100	78.322	ENSCSEG00000018164	rbm17	100	78.089	Cynoglossus_semilaevis
ENSPKIG00000005048	-	100	76.709	ENSCVAG00000002476	rbm17	100	76.962	Cyprinodon_variegatus
ENSPKIG00000005048	-	100	76.389	ENSDARG00000031346	rbm17	100	78.341	Danio_rerio
ENSPKIG00000005048	-	100	77.934	ENSDNOG00000035920	RBM17	100	77.934	Dasypus_novemcinctus
ENSPKIG00000005048	-	99	36.322	FBgn0086683	Spf45	99	35.938	Drosophila_melanogaster
ENSPKIG00000005048	-	88	83.886	ENSETEG00000006642	RBM17	86	83.886	Echinops_telfairi
ENSPKIG00000005048	-	65	70.732	ENSEBUG00000010253	rbm17	87	70.732	Eptatretus_burgeri
ENSPKIG00000005048	-	93	73.671	ENSEASG00005009236	-	100	73.671	Equus_asinus_asinus
ENSPKIG00000005048	-	100	76.203	ENSEASG00005019205	-	100	76.962	Equus_asinus_asinus
ENSPKIG00000005048	-	100	68.545	ENSECAG00000001379	-	100	68.545	Equus_caballus
ENSPKIG00000005048	-	100	69.898	ENSECAG00000008939	RBM17	100	70.588	Equus_caballus
ENSPKIG00000005048	-	92	61.789	ENSEEUG00000013077	RBM17	100	61.789	Erinaceus_europaeus
ENSPKIG00000005048	-	100	77.294	ENSELUG00000006440	rbm17	100	77.064	Esox_lucius
ENSPKIG00000005048	-	100	77.934	ENSFCAG00000031988	RBM17	100	77.934	Felis_catus
ENSPKIG00000005048	-	100	76.291	ENSFALG00000001790	RBM17	100	76.291	Ficedula_albicollis
ENSPKIG00000005048	-	100	78.169	ENSFDAG00000007470	RBM17	100	78.169	Fukomys_damarensis
ENSPKIG00000005048	-	100	78.880	ENSFHEG00000001266	rbm17	100	77.551	Fundulus_heteroclitus
ENSPKIG00000005048	-	99	73.536	ENSGMOG00000008438	rbm17	100	73.068	Gadus_morhua
ENSPKIG00000005048	-	100	77.230	ENSGALG00000006332	RBM17	100	77.230	Gallus_gallus
ENSPKIG00000005048	-	100	77.722	ENSGAFG00000019879	rbm17	100	77.722	Gambusia_affinis
ENSPKIG00000005048	-	99	77.723	ENSGACG00000019174	rbm17	99	75.926	Gasterosteus_aculeatus
ENSPKIG00000005048	-	100	76.526	ENSGAGG00000019906	RBM17	100	76.526	Gopherus_agassizii
ENSPKIG00000005048	-	100	80.000	ENSHBUG00000016624	rbm17	100	79.699	Haplochromis_burtoni
ENSPKIG00000005048	-	100	78.169	ENSHGLG00000011580	RBM17	100	78.169	Heterocephalus_glaber_female
ENSPKIG00000005048	-	100	78.169	ENSHGLG00100010460	RBM17	100	78.169	Heterocephalus_glaber_male
ENSPKIG00000005048	-	100	63.706	ENSHGLG00100010556	-	100	60.000	Heterocephalus_glaber_male
ENSPKIG00000005048	-	99	77.518	ENSHCOG00000010865	rbm17	100	76.815	Hippocampus_comes
ENSPKIG00000005048	-	100	74.813	ENSIPUG00000007699	Rbm17	100	80.549	Ictalurus_punctatus
ENSPKIG00000005048	-	100	78.404	ENSSTOG00000013591	RBM17	100	78.404	Ictidomys_tridecemlineatus
ENSPKIG00000005048	-	100	78.404	ENSJJAG00000022886	Rbm17	100	78.404	Jaculus_jaculus
ENSPKIG00000005048	-	100	56.573	ENSJJAG00000000993	-	100	53.052	Jaculus_jaculus
ENSPKIG00000005048	-	100	77.136	ENSKMAG00000021400	rbm17	100	77.136	Kryptolebias_marmoratus
ENSPKIG00000005048	-	100	79.310	ENSLBEG00000000881	rbm17	100	78.704	Labrus_bergylta
ENSPKIG00000005048	-	99	63.972	ENSLACG00000017297	RBM17	99	64.665	Latimeria_chalumnae
ENSPKIG00000005048	-	100	80.751	ENSLOCG00000015659	rbm17	100	80.751	Lepisosteus_oculatus
ENSPKIG00000005048	-	100	77.934	ENSLAFG00000011629	RBM17	100	77.934	Loxodonta_africana
ENSPKIG00000005048	-	100	77.700	ENSMFAG00000035521	RBM17	95	85.593	Macaca_fascicularis
ENSPKIG00000005048	-	100	77.700	ENSMMUG00000015152	RBM17	95	85.593	Macaca_mulatta
ENSPKIG00000005048	-	100	77.700	ENSMNEG00000017264	RBM17	95	85.593	Macaca_nemestrina
ENSPKIG00000005048	-	100	77.700	ENSMLEG00000029340	RBM17	95	85.593	Mandrillus_leucophaeus
ENSPKIG00000005048	-	100	78.322	ENSMAMG00000000387	rbm17	100	78.605	Mastacembelus_armatus
ENSPKIG00000005048	-	100	80.000	ENSMZEG00005015179	rbm17	100	79.699	Maylandia_zebra
ENSPKIG00000005048	-	100	76.869	ENSMGAG00000003981	RBM17	100	76.869	Meleagris_gallopavo
ENSPKIG00000005048	-	100	78.404	ENSMAUG00000019247	Rbm17	100	78.404	Mesocricetus_auratus
ENSPKIG00000005048	-	100	77.934	ENSMICG00000003976	-	100	77.934	Microcebus_murinus
ENSPKIG00000005048	-	100	72.600	ENSMICG00000041489	-	100	72.600	Microcebus_murinus
ENSPKIG00000005048	-	96	62.857	ENSMOCG00000014517	-	99	65.217	Microtus_ochrogaster
ENSPKIG00000005048	-	100	78.404	ENSMOCG00000011847	Rbm17	100	78.404	Microtus_ochrogaster
ENSPKIG00000005048	-	100	75.362	ENSMMOG00000010264	rbm17	100	74.879	Mola_mola
ENSPKIG00000005048	-	100	77.230	ENSMODG00000016648	RBM17	100	77.230	Monodelphis_domestica
ENSPKIG00000005048	-	100	80.563	ENSMALG00000010597	rbm17	100	80.612	Monopterus_albus
ENSPKIG00000005048	-	100	78.169	MGP_CAROLIEiJ_G0023173	Rbm17	100	78.169	Mus_caroli
ENSPKIG00000005048	-	100	78.169	ENSMUSG00000037197	Rbm17	100	78.169	Mus_musculus
ENSPKIG00000005048	-	100	78.404	MGP_PahariEiJ_G0019233	Rbm17	100	78.404	Mus_pahari
ENSPKIG00000005048	-	100	78.169	MGP_SPRETEiJ_G0024091	Rbm17	100	78.169	Mus_spretus
ENSPKIG00000005048	-	94	76.000	ENSMPUG00000016359	RBM17	98	76.000	Mustela_putorius_furo
ENSPKIG00000005048	-	100	76.347	ENSMLUG00000002302	-	100	76.347	Myotis_lucifugus
ENSPKIG00000005048	-	100	75.117	ENSMLUG00000025709	-	100	73.944	Myotis_lucifugus
ENSPKIG00000005048	-	81	77.011	ENSNGAG00000000663	-	94	77.011	Nannospalax_galili
ENSPKIG00000005048	-	100	78.404	ENSNGAG00000000741	Rbm17	100	78.404	Nannospalax_galili
ENSPKIG00000005048	-	100	78.571	ENSNBRG00000018148	rbm17	100	78.061	Neolamprologus_brichardi
ENSPKIG00000005048	-	100	77.700	ENSNLEG00000033350	RBM17	95	85.593	Nomascus_leucogenys
ENSPKIG00000005048	-	100	72.300	ENSMEUG00000011347	RBM17	100	72.300	Notamacropus_eugenii
ENSPKIG00000005048	-	100	68.310	ENSOPRG00000002993	RBM17	100	68.310	Ochotona_princeps
ENSPKIG00000005048	-	97	59.948	ENSODEG00000007286	-	99	59.179	Octodon_degus
ENSPKIG00000005048	-	100	77.518	ENSODEG00000004393	RBM17	100	77.518	Octodon_degus
ENSPKIG00000005048	-	100	80.186	ENSONIG00000011838	rbm17	100	78.788	Oreochromis_niloticus
ENSPKIG00000005048	-	100	76.995	ENSOANG00000015455	RBM17	100	76.995	Ornithorhynchus_anatinus
ENSPKIG00000005048	-	100	77.907	ENSORLG00000028798	rbm17	100	78.392	Oryzias_latipes
ENSPKIG00000005048	-	100	77.674	ENSORLG00020004593	rbm17	100	78.061	Oryzias_latipes_hni
ENSPKIG00000005048	-	100	78.140	ENSORLG00015000033	rbm17	99	77.209	Oryzias_latipes_hsok
ENSPKIG00000005048	-	100	78.605	ENSOMEG00000012060	rbm17	100	86.875	Oryzias_melastigma
ENSPKIG00000005048	-	100	78.404	ENSOGAG00000015687	RBM17	100	78.404	Otolemur_garnettii
ENSPKIG00000005048	-	100	77.230	ENSOARG00000012975	RBM17	100	77.230	Ovis_aries
ENSPKIG00000005048	-	100	77.700	ENSPPAG00000032347	RBM17	95	85.593	Pan_paniscus
ENSPKIG00000005048	-	100	77.934	ENSPPRG00000010706	RBM17	100	77.934	Panthera_pardus
ENSPKIG00000005048	-	100	77.934	ENSPTIG00000007596	RBM17	100	77.934	Panthera_tigris_altaica
ENSPKIG00000005048	-	100	77.700	ENSPTRG00000002265	RBM17	95	85.593	Pan_troglodytes
ENSPKIG00000005048	-	100	77.700	ENSPANG00000023425	RBM17	95	85.593	Papio_anubis
ENSPKIG00000005048	-	100	75.991	ENSPSIG00000012332	RBM17	100	75.991	Pelodiscus_sinensis
ENSPKIG00000005048	-	100	75.810	ENSPMGG00000007980	rbm17	100	75.810	Periophthalmus_magnuspinnatus
ENSPKIG00000005048	-	100	78.404	ENSPEMG00000014320	Rbm17	100	78.404	Peromyscus_maniculatus_bairdii
ENSPKIG00000005048	-	100	76.869	ENSPCIG00000019260	-	100	76.869	Phascolarctos_cinereus
ENSPKIG00000005048	-	100	77.103	ENSPFOG00000013271	rbm17	100	77.336	Poecilia_formosa
ENSPKIG00000005048	-	100	79.082	ENSPLAG00000004455	rbm17	100	79.082	Poecilia_latipinna
ENSPKIG00000005048	-	100	77.103	ENSPMEG00000014864	rbm17	100	77.336	Poecilia_mexicana
ENSPKIG00000005048	-	100	77.354	ENSPREG00000015589	rbm17	100	77.354	Poecilia_reticulata
ENSPKIG00000005048	-	100	77.700	ENSPPYG00000002067	RBM17	100	77.700	Pongo_abelii
ENSPKIG00000005048	-	99	57.921	ENSPPYG00000019881	-	100	59.137	Pongo_abelii
ENSPKIG00000005048	-	87	53.448	ENSPPYG00000019042	-	100	56.289	Pongo_abelii
ENSPKIG00000005048	-	100	70.657	ENSPCAG00000016879	RBM17	100	70.657	Procavia_capensis
ENSPKIG00000005048	-	100	78.228	ENSPCOG00000027881	RBM17	100	77.700	Propithecus_coquereli
ENSPKIG00000005048	-	100	70.657	ENSPVAG00000015499	RBM17	100	69.953	Pteropus_vampyrus
ENSPKIG00000005048	-	100	75.765	ENSPNYG00000015274	rbm17	100	75.510	Pundamilia_nyererei
ENSPKIG00000005048	-	100	81.910	ENSPNAG00000030046	rbm17	100	81.910	Pygocentrus_nattereri
ENSPKIG00000005048	-	100	78.404	ENSRNOG00000018767	Rbm17	100	78.404	Rattus_norvegicus
ENSPKIG00000005048	-	100	78.055	ENSRBIG00000043727	RBM17	95	85.593	Rhinopithecus_bieti
ENSPKIG00000005048	-	100	77.700	ENSRROG00000044142	RBM17	95	85.593	Rhinopithecus_roxellana
ENSPKIG00000005048	-	100	78.987	ENSSBOG00000031661	-	92	85.965	Saimiri_boliviensis_boliviensis
ENSPKIG00000005048	-	100	69.014	ENSSBOG00000023653	-	100	68.779	Saimiri_boliviensis_boliviensis
ENSPKIG00000005048	-	100	77.465	ENSSHAG00000012480	-	100	77.465	Sarcophilus_harrisii
ENSPKIG00000005048	-	100	85.211	ENSSFOG00015009892	rbm17	100	85.211	Scleropages_formosus
ENSPKIG00000005048	-	100	80.407	ENSSMAG00000012368	rbm17	100	80.407	Scophthalmus_maximus
ENSPKIG00000005048	-	100	82.653	ENSSDUG00000015015	rbm17	100	80.612	Seriola_dumerili
ENSPKIG00000005048	-	100	82.653	ENSSLDG00000014486	rbm17	100	80.612	Seriola_lalandi_dorsalis
ENSPKIG00000005048	-	65	59.004	ENSSARG00000001792	-	100	59.004	Sorex_araneus
ENSPKIG00000005048	-	99	76.471	ENSSPUG00000001036	RBM17	99	76.471	Sphenodon_punctatus
ENSPKIG00000005048	-	100	79.254	ENSSPAG00000002338	rbm17	100	79.699	Stegastes_partitus
ENSPKIG00000005048	-	100	76.995	ENSSSCG00000011134	RBM17	100	76.995	Sus_scrofa
ENSPKIG00000005048	-	100	76.761	ENSTGUG00000002013	RBM17	100	76.761	Taeniopygia_guttata
ENSPKIG00000005048	-	100	78.788	ENSTRUG00000010698	rbm17	100	78.322	Takifugu_rubripes
ENSPKIG00000005048	-	100	79.487	ENSTNIG00000006892	rbm17	100	79.021	Tetraodon_nigroviridis
ENSPKIG00000005048	-	100	59.753	ENSTBEG00000014686	RBM17	100	60.247	Tupaia_belangeri
ENSPKIG00000005048	-	90	75.065	ENSTTRG00000001344	RBM17	100	75.065	Tursiops_truncatus
ENSPKIG00000005048	-	100	77.273	ENSUAMG00000009499	RBM17	100	77.273	Ursus_americanus
ENSPKIG00000005048	-	100	78.169	ENSUMAG00000012237	RBM17	100	78.517	Ursus_maritimus
ENSPKIG00000005048	-	100	67.606	ENSVPAG00000005497	RBM17	100	67.606	Vicugna_pacos
ENSPKIG00000005048	-	100	78.827	ENSVVUG00000006780	RBM17	100	77.387	Vulpes_vulpes
ENSPKIG00000005048	-	99	74.690	ENSXETG00000018123	rbm17	100	74.690	Xenopus_tropicalis
ENSPKIG00000005048	-	100	76.675	ENSXMAG00000008674	rbm17	100	76.675	Xiphophorus_maculatus