EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000005309 (Gene tree)
Gene ID: 111845236
Gene Symbol: trmt1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 7698 bases
Position: chrPGUA01000142.1:1312404-1320101
Accession: 111845236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000020608	zf-CCCH	PF00642.24	3.3e-05	1	1
ENSPKIP00000020608	TRM	PF02005.16	3.5e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000001226	-	3446	-	ENSPKIP00000020608	664 (aa)	XP_023670269	UPI000CD61C08

Gene Model

Click here to download ENSPKIG00000005309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005309's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005309	trmt1	84	68.522	ENSG00000104907	TRMT1	100	71.875	Homo_sapiens
ENSPKIG00000005309	trmt1	85	66.438	ENSAMEG00000012598	TRMT1	87	66.438	Ailuropoda_melanoleuca
ENSPKIG00000005309	trmt1	92	68.679	ENSACIG00000018680	trmt1	96	68.679	Amphilophus_citrinellus
ENSPKIG00000005309	trmt1	100	71.765	ENSAOCG00000006781	trmt1	100	71.765	Amphiprion_ocellaris
ENSPKIG00000005309	trmt1	100	71.765	ENSAPEG00000007712	trmt1	100	71.765	Amphiprion_percula
ENSPKIG00000005309	trmt1	100	71.068	ENSATEG00000001872	trmt1	100	71.068	Anabas_testudineus
ENSPKIG00000005309	trmt1	84	68.063	ENSACAG00000003825	TRMT1	93	68.063	Anolis_carolinensis
ENSPKIG00000005309	trmt1	84	67.073	ENSANAG00000023016	TRMT1	92	67.073	Aotus_nancymaae
ENSPKIG00000005309	trmt1	91	73.443	ENSACLG00000010073	trmt1	96	75.685	Astatotilapia_calliptera
ENSPKIG00000005309	trmt1	92	74.032	ENSAMXG00000012026	trmt1	93	74.032	Astyanax_mexicanus
ENSPKIG00000005309	trmt1	89	65.196	ENSBTAG00000019325	TRMT1	87	65.196	Bos_taurus
ENSPKIG00000005309	trmt1	77	42.389	WBGene00006613	trm-1	94	42.389	Caenorhabditis_elegans
ENSPKIG00000005309	trmt1	84	65.565	ENSCJAG00000004566	TRMT1	88	65.565	Callithrix_jacchus
ENSPKIG00000005309	trmt1	85	67.399	ENSCAFG00000017070	TRMT1	91	68.041	Canis_familiaris
ENSPKIG00000005309	trmt1	85	67.005	ENSCAFG00020005397	TRMT1	89	67.876	Canis_lupus_dingo
ENSPKIG00000005309	trmt1	89	64.706	ENSCHIG00000013569	TRMT1	92	64.706	Capra_hircus
ENSPKIG00000005309	trmt1	84	66.492	ENSTSYG00000003207	TRMT1	87	66.492	Carlito_syrichta
ENSPKIG00000005309	trmt1	78	63.327	ENSCAPG00000003355	TRMT1	94	63.327	Cavia_aperea
ENSPKIG00000005309	trmt1	84	66.608	ENSCPOG00000011754	TRMT1	87	66.608	Cavia_porcellus
ENSPKIG00000005309	trmt1	84	65.799	ENSCCAG00000022263	TRMT1	92	65.799	Cebus_capucinus
ENSPKIG00000005309	trmt1	84	68.815	ENSCATG00000039850	TRMT1	87	68.815	Cercocebus_atys
ENSPKIG00000005309	trmt1	74	60.465	ENSCATG00000038220	-	91	60.465	Cercocebus_atys
ENSPKIG00000005309	trmt1	84	68.651	ENSCLAG00000015295	TRMT1	89	66.608	Chinchilla_lanigera
ENSPKIG00000005309	trmt1	70	70.526	ENSCSAG00000006500	TRMT1	89	70.526	Chlorocebus_sabaeus
ENSPKIG00000005309	trmt1	84	68.662	ENSCPBG00000023866	TRMT1	85	69.366	Chrysemys_picta_bellii
ENSPKIG00000005309	trmt1	79	48.629	ENSCING00000002884	-	96	48.629	Ciona_intestinalis
ENSPKIG00000005309	trmt1	80	49.348	ENSCSAVG00000010927	-	100	48.148	Ciona_savignyi
ENSPKIG00000005309	trmt1	81	54.152	ENSCANG00000031650	-	87	54.152	Colobus_angolensis_palliatus
ENSPKIG00000005309	trmt1	84	55.382	ENSCANG00000040631	TRMT1	87	55.382	Colobus_angolensis_palliatus
ENSPKIG00000005309	trmt1	85	65.636	ENSCGRG00001022594	Trmt1	89	66.038	Cricetulus_griseus_chok1gshd
ENSPKIG00000005309	trmt1	85	65.636	ENSCGRG00000017732	Trmt1	88	66.038	Cricetulus_griseus_crigri
ENSPKIG00000005309	trmt1	92	73.151	ENSCSEG00000001643	trmt1	99	70.847	Cynoglossus_semilaevis
ENSPKIG00000005309	trmt1	100	72.578	ENSCVAG00000011886	trmt1	100	72.578	Cyprinodon_variegatus
ENSPKIG00000005309	trmt1	100	69.609	ENSDARG00000010978	trmt1	100	69.666	Danio_rerio
ENSPKIG00000005309	trmt1	77	46.415	ENSDNOG00000048240	-	89	46.415	Dasypus_novemcinctus
ENSPKIG00000005309	trmt1	84	66.263	ENSDORG00000014298	Trmt1	87	66.263	Dipodomys_ordii
ENSPKIG00000005309	trmt1	80	48.352	FBgn0032430	CG6388	92	48.352	Drosophila_melanogaster
ENSPKIG00000005309	trmt1	76	52.277	ENSEBUG00000003449	trmt1	75	52.456	Eptatretus_burgeri
ENSPKIG00000005309	trmt1	84	68.118	ENSEASG00005004050	TRMT1	90	68.118	Equus_asinus_asinus
ENSPKIG00000005309	trmt1	84	68.293	ENSECAG00000016149	TRMT1	90	68.293	Equus_caballus
ENSPKIG00000005309	trmt1	59	56.203	ENSEEUG00000014102	-	100	56.203	Erinaceus_europaeus
ENSPKIG00000005309	trmt1	98	70.808	ENSELUG00000021659	trmt1	99	70.808	Esox_lucius
ENSPKIG00000005309	trmt1	85	67.358	ENSFCAG00000000483	TRMT1	88	67.358	Felis_catus
ENSPKIG00000005309	trmt1	84	67.308	ENSFDAG00000007386	TRMT1	87	67.308	Fukomys_damarensis
ENSPKIG00000005309	trmt1	91	73.970	ENSFHEG00000012865	trmt1	100	73.970	Fundulus_heteroclitus
ENSPKIG00000005309	trmt1	86	69.459	ENSGMOG00000006564	trmt1	100	69.459	Gadus_morhua
ENSPKIG00000005309	trmt1	91	75.450	ENSGAFG00000011862	trmt1	95	75.450	Gambusia_affinis
ENSPKIG00000005309	trmt1	85	74.341	ENSGACG00000000227	trmt1	93	74.868	Gasterosteus_aculeatus
ENSPKIG00000005309	trmt1	84	68.739	ENSGAGG00000016432	TRMT1	85	68.739	Gopherus_agassizii
ENSPKIG00000005309	trmt1	84	68.522	ENSGGOG00000014007	TRMT1	87	68.522	Gorilla_gorilla
ENSPKIG00000005309	trmt1	82	68.670	ENSHBUG00000008821	trmt1	92	68.670	Haplochromis_burtoni
ENSPKIG00000005309	trmt1	84	67.776	ENSHGLG00000015972	TRMT1	87	67.776	Heterocephalus_glaber_female
ENSPKIG00000005309	trmt1	84	63.287	ENSHGLG00100018112	TRMT1	87	63.287	Heterocephalus_glaber_male
ENSPKIG00000005309	trmt1	88	72.203	ENSHCOG00000009447	trmt1	92	72.203	Hippocampus_comes
ENSPKIG00000005309	trmt1	98	69.094	ENSIPUG00000002899	trmt1	98	68.945	Ictalurus_punctatus
ENSPKIG00000005309	trmt1	84	68.586	ENSSTOG00000012531	TRMT1	88	68.586	Ictidomys_tridecemlineatus
ENSPKIG00000005309	trmt1	84	66.899	ENSJJAG00000017154	Trmt1	88	66.899	Jaculus_jaculus
ENSPKIG00000005309	trmt1	99	71.535	ENSKMAG00000011809	trmt1	98	77.547	Kryptolebias_marmoratus
ENSPKIG00000005309	trmt1	93	72.452	ENSLBEG00000012703	trmt1	94	71.787	Labrus_bergylta
ENSPKIG00000005309	trmt1	85	60.595	ENSLACG00000014585	TRMT1	94	60.839	Latimeria_chalumnae
ENSPKIG00000005309	trmt1	85	70.984	ENSLOCG00000006479	trmt1	99	72.615	Lepisosteus_oculatus
ENSPKIG00000005309	trmt1	84	67.188	ENSLAFG00000014072	TRMT1	88	67.188	Loxodonta_africana
ENSPKIG00000005309	trmt1	84	68.815	ENSMFAG00000033143	TRMT1	87	68.815	Macaca_fascicularis
ENSPKIG00000005309	trmt1	84	63.542	ENSMMUG00000001167	TRMT1	87	63.542	Macaca_mulatta
ENSPKIG00000005309	trmt1	84	68.815	ENSMNEG00000037867	TRMT1	87	68.815	Macaca_nemestrina
ENSPKIG00000005309	trmt1	84	68.641	ENSMLEG00000016142	TRMT1	87	68.641	Mandrillus_leucophaeus
ENSPKIG00000005309	trmt1	96	73.220	ENSMAMG00000004357	trmt1	96	73.220	Mastacembelus_armatus
ENSPKIG00000005309	trmt1	88	75.507	ENSMZEG00005014510	trmt1	90	75.507	Maylandia_zebra
ENSPKIG00000005309	trmt1	84	66.609	ENSMAUG00000011134	Trmt1	87	66.609	Mesocricetus_auratus
ENSPKIG00000005309	trmt1	84	68.641	ENSMICG00000000793	TRMT1	87	68.641	Microcebus_murinus
ENSPKIG00000005309	trmt1	84	66.725	ENSMOCG00000015895	Trmt1	87	66.958	Microtus_ochrogaster
ENSPKIG00000005309	trmt1	87	76.389	ENSMMOG00000011097	trmt1	94	76.389	Mola_mola
ENSPKIG00000005309	trmt1	85	69.056	ENSMODG00000011619	TRMT1	94	69.056	Monodelphis_domestica
ENSPKIG00000005309	trmt1	85	66.494	MGP_CAROLIEiJ_G0031304	Trmt1	88	66.494	Mus_caroli
ENSPKIG00000005309	trmt1	85	66.494	ENSMUSG00000001909	Trmt1	88	66.494	Mus_musculus
ENSPKIG00000005309	trmt1	85	66.205	MGP_SPRETEiJ_G0032422	Trmt1	88	66.205	Mus_spretus
ENSPKIG00000005309	trmt1	84	67.596	ENSMPUG00000004210	TRMT1	82	67.596	Mustela_putorius_furo
ENSPKIG00000005309	trmt1	86	68.601	ENSMLUG00000012809	TRMT1	87	68.601	Myotis_lucifugus
ENSPKIG00000005309	trmt1	84	66.955	ENSNGAG00000022486	Trmt1	87	66.955	Nannospalax_galili
ENSPKIG00000005309	trmt1	73	80.723	ENSNBRG00000024376	trmt1	86	80.723	Neolamprologus_brichardi
ENSPKIG00000005309	trmt1	66	67.687	ENSNLEG00000013019	-	84	67.687	Nomascus_leucogenys
ENSPKIG00000005309	trmt1	84	68.673	ENSMEUG00000013756	TRMT1	97	68.673	Notamacropus_eugenii
ENSPKIG00000005309	trmt1	69	78.000	ENSOPRG00000009471	-	71	78.000	Ochotona_princeps
ENSPKIG00000005309	trmt1	84	67.776	ENSODEG00000010323	TRMT1	87	67.776	Octodon_degus
ENSPKIG00000005309	trmt1	99	71.964	ENSONIG00000000400	trmt1	95	78.415	Oreochromis_niloticus
ENSPKIG00000005309	trmt1	70	70.105	ENSOCUG00000021934	TRMT1	90	70.316	Oryctolagus_cuniculus
ENSPKIG00000005309	trmt1	91	69.032	ENSORLG00000020074	trmt1	95	71.096	Oryzias_latipes
ENSPKIG00000005309	trmt1	91	73.409	ENSORLG00020007561	trmt1	94	74.874	Oryzias_latipes_hni
ENSPKIG00000005309	trmt1	91	73.246	ENSORLG00015006547	trmt1	94	73.246	Oryzias_latipes_hsok
ENSPKIG00000005309	trmt1	86	77.893	ENSOMEG00000019343	trmt1	88	77.893	Oryzias_melastigma
ENSPKIG00000005309	trmt1	84	66.783	ENSOGAG00000025576	TRMT1	90	67.535	Otolemur_garnettii
ENSPKIG00000005309	trmt1	88	53.642	ENSOARG00000009397	TRMT1	85	53.642	Ovis_aries
ENSPKIG00000005309	trmt1	85	60.104	ENSPPRG00000012117	TRMT1	88	60.757	Panthera_pardus
ENSPKIG00000005309	trmt1	63	66.436	ENSPTIG00000008833	TRMT1	83	66.436	Panthera_tigris_altaica
ENSPKIG00000005309	trmt1	82	50.702	ENSPTRG00000050421	-	90	50.702	Pan_troglodytes
ENSPKIG00000005309	trmt1	84	68.522	ENSPTRG00000010557	TRMT1	87	68.522	Pan_troglodytes
ENSPKIG00000005309	trmt1	84	68.815	ENSPANG00000009247	TRMT1	87	68.815	Papio_anubis
ENSPKIG00000005309	trmt1	65	57.562	ENSPANG00000034058	-	78	57.562	Papio_anubis
ENSPKIG00000005309	trmt1	81	57.326	ENSPSIG00000008762	TRMT1	79	57.326	Pelodiscus_sinensis
ENSPKIG00000005309	trmt1	90	74.833	ENSPMGG00000019764	trmt1	95	75.000	Periophthalmus_magnuspinnatus
ENSPKIG00000005309	trmt1	84	66.841	ENSPEMG00000016247	Trmt1	86	67.190	Peromyscus_maniculatus_bairdii
ENSPKIG00000005309	trmt1	86	62.630	ENSPMAG00000004329	trmt1	91	62.630	Petromyzon_marinus
ENSPKIG00000005309	trmt1	84	69.435	ENSPCIG00000019273	TRMT1	89	69.435	Phascolarctos_cinereus
ENSPKIG00000005309	trmt1	87	78.485	ENSPFOG00000008527	trmt1	91	78.485	Poecilia_formosa
ENSPKIG00000005309	trmt1	87	78.276	ENSPLAG00000018788	trmt1	91	80.755	Poecilia_latipinna
ENSPKIG00000005309	trmt1	91	75.618	ENSPMEG00000013120	trmt1	94	75.618	Poecilia_mexicana
ENSPKIG00000005309	trmt1	87	76.764	ENSPREG00000000211	trmt1	88	76.764	Poecilia_reticulata
ENSPKIG00000005309	trmt1	84	68.348	ENSPPYG00000009622	TRMT1	87	68.348	Pongo_abelii
ENSPKIG00000005309	trmt1	84	63.176	ENSPCAG00000003698	TRMT1	88	63.176	Procavia_capensis
ENSPKIG00000005309	trmt1	84	68.293	ENSPCOG00000008653	TRMT1	87	68.293	Propithecus_coquereli
ENSPKIG00000005309	trmt1	85	67.637	ENSPVAG00000015076	TRMT1	88	67.637	Pteropus_vampyrus
ENSPKIG00000005309	trmt1	85	74.520	ENSPNYG00000013960	trmt1	94	74.520	Pundamilia_nyererei
ENSPKIG00000005309	trmt1	95	66.718	ENSPNAG00000024859	trmt1	99	66.718	Pygocentrus_nattereri
ENSPKIG00000005309	trmt1	85	66.724	ENSRNOG00000002914	Trmt1	90	66.724	Rattus_norvegicus
ENSPKIG00000005309	trmt1	81	51.878	ENSRBIG00000037505	-	87	51.878	Rhinopithecus_bieti
ENSPKIG00000005309	trmt1	84	68.990	ENSRBIG00000038324	TRMT1	87	68.990	Rhinopithecus_bieti
ENSPKIG00000005309	trmt1	84	68.990	ENSRROG00000028599	TRMT1	87	68.990	Rhinopithecus_roxellana
ENSPKIG00000005309	trmt1	81	51.439	ENSRROG00000031847	-	86	51.439	Rhinopithecus_roxellana
ENSPKIG00000005309	trmt1	75	38.318	YDR120C	-	92	37.689	Saccharomyces_cerevisiae
ENSPKIG00000005309	trmt1	84	66.202	ENSSBOG00000028861	TRMT1	92	66.202	Saimiri_boliviensis_boliviensis
ENSPKIG00000005309	trmt1	84	69.272	ENSSHAG00000014381	TRMT1	94	68.761	Sarcophilus_harrisii
ENSPKIG00000005309	trmt1	100	76.855	ENSSFOG00015004139	trmt1	100	77.151	Scleropages_formosus
ENSPKIG00000005309	trmt1	99	70.178	ENSSMAG00000021136	trmt1	99	70.178	Scophthalmus_maximus
ENSPKIG00000005309	trmt1	100	70.987	ENSSDUG00000012740	trmt1	100	71.134	Seriola_dumerili
ENSPKIG00000005309	trmt1	100	70.839	ENSSLDG00000005971	trmt1	100	70.987	Seriola_lalandi_dorsalis
ENSPKIG00000005309	trmt1	76	65.504	ENSSARG00000005138	TRMT1	91	65.504	Sorex_araneus
ENSPKIG00000005309	trmt1	90	51.645	ENSSPUG00000001084	TRMT1	96	52.053	Sphenodon_punctatus
ENSPKIG00000005309	trmt1	91	73.650	ENSSPAG00000007153	trmt1	100	74.252	Stegastes_partitus
ENSPKIG00000005309	trmt1	89	65.794	ENSSSCG00000013744	TRMT1	96	65.794	Sus_scrofa
ENSPKIG00000005309	trmt1	88	68.123	ENSTRUG00000010700	trmt1	92	69.522	Takifugu_rubripes
ENSPKIG00000005309	trmt1	85	78.799	ENSTNIG00000018808	trmt1	99	78.799	Tetraodon_nigroviridis
ENSPKIG00000005309	trmt1	84	65.451	ENSTTRG00000006379	TRMT1	87	65.451	Tursiops_truncatus
ENSPKIG00000005309	trmt1	85	66.952	ENSUAMG00000022911	TRMT1	95	64.007	Ursus_americanus
ENSPKIG00000005309	trmt1	85	66.438	ENSUMAG00000006027	TRMT1	91	66.438	Ursus_maritimus
ENSPKIG00000005309	trmt1	85	67.808	ENSVVUG00000024177	TRMT1	88	67.808	Vulpes_vulpes
ENSPKIG00000005309	trmt1	68	69.197	ENSXETG00000033863	TRMT1	92	69.197	Xenopus_tropicalis
ENSPKIG00000005309	trmt1	93	74.677	ENSXCOG00000015733	trmt1	96	74.677	Xiphophorus_couchianus
ENSPKIG00000005309	trmt1	84	79.433	ENSXMAG00000013823	trmt1	98	79.433	Xiphophorus_maculatus