EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000005427 (Gene tree)
Gene ID: 111835940
Gene Symbol: ythdf1
Alias: -
Full Name: YTH N(6)-methyladenosine RNA binding protein 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 6213 bases
Position: chrPGUA01000055.1:1962140-1968352
Accession: ZDB-GENE-040426-2786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000020798	YTH	PF04146.15	2.6e-39	1	1
ENSPKIP00000020762	YTH	PF04146.15	2.9e-39	1	1
ENSPKIP00000020779	YTH	PF04146.15	3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000001401	-	2270	-	ENSPKIP00000020779	600 (aa)	-	-
ENSPKIT00000001384	-	2270	-	ENSPKIP00000020762	600 (aa)	-	-
ENSPKIT00000001420	-	1680	-	ENSPKIP00000020798	559 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000005427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000005427	ythdf1	99	73.890	ENSPKIG00000005026	YTHDF1	98	72.840
ENSPKIG00000005427	ythdf1	94	65.996	ENSPKIG00000008298	ythdf3	98	63.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005427	ythdf1	100	71.154	ENSG00000149658	YTHDF1	100	69.123	Homo_sapiens
ENSPKIG00000005427	ythdf1	96	73.488	ENSAPOG00000004358	ythdf1	98	72.378	Acanthochromis_polyacanthus
ENSPKIG00000005427	ythdf1	100	74.232	ENSAPOG00000010796	YTHDF1	100	74.048	Acanthochromis_polyacanthus
ENSPKIG00000005427	ythdf1	97	72.202	ENSAMEG00000017323	YTHDF1	96	70.991	Ailuropoda_melanoleuca
ENSPKIG00000005427	ythdf1	100	76.182	ENSACIG00000020083	YTHDF1	100	74.346	Amphilophus_citrinellus
ENSPKIG00000005427	ythdf1	96	71.813	ENSACIG00000011264	ythdf1	99	71.675	Amphilophus_citrinellus
ENSPKIG00000005427	ythdf1	100	75.131	ENSAOCG00000012567	YTHDF1	100	74.606	Amphiprion_ocellaris
ENSPKIG00000005427	ythdf1	96	73.056	ENSAOCG00000022251	ythdf1	99	71.529	Amphiprion_ocellaris
ENSPKIG00000005427	ythdf1	100	75.131	ENSAPEG00000008750	YTHDF1	100	74.606	Amphiprion_percula
ENSPKIG00000005427	ythdf1	100	76.140	ENSATEG00000005996	YTHDF1	100	74.912	Anabas_testudineus
ENSPKIG00000005427	ythdf1	96	72.924	ENSATEG00000023840	ythdf1	99	72.711	Anabas_testudineus
ENSPKIG00000005427	ythdf1	97	72.760	ENSAPLG00000005985	YTHDF1	97	70.483	Anas_platyrhynchos
ENSPKIG00000005427	ythdf1	100	69.588	ENSACAG00000005560	YTHDF1	100	69.512	Anolis_carolinensis
ENSPKIG00000005427	ythdf1	100	69.792	ENSANAG00000034786	-	100	68.596	Aotus_nancymaae
ENSPKIG00000005427	ythdf1	100	60.211	ENSANAG00000021022	-	100	58.609	Aotus_nancymaae
ENSPKIG00000005427	ythdf1	100	74.431	ENSACLG00000025518	YTHDF1	100	73.905	Astatotilapia_calliptera
ENSPKIG00000005427	ythdf1	100	70.345	ENSBTAG00000010383	YTHDF1	100	69.649	Bos_taurus
ENSPKIG00000005427	ythdf1	100	71.454	ENSCJAG00000010056	YTHDF1	100	69.298	Callithrix_jacchus
ENSPKIG00000005427	ythdf1	91	70.962	ENSCAFG00000012772	YTHDF1	99	69.171	Canis_familiaris
ENSPKIG00000005427	ythdf1	91	70.962	ENSCAFG00020001214	YTHDF1	99	69.171	Canis_lupus_dingo
ENSPKIG00000005427	ythdf1	100	69.896	ENSCHIG00000026494	YTHDF1	100	69.298	Capra_hircus
ENSPKIG00000005427	ythdf1	98	72.043	ENSTSYG00000033436	YTHDF1	98	70.863	Carlito_syrichta
ENSPKIG00000005427	ythdf1	97	69.495	ENSCAPG00000002544	YTHDF1	93	67.631	Cavia_aperea
ENSPKIG00000005427	ythdf1	100	70.053	ENSCPOG00000010202	YTHDF1	100	68.246	Cavia_porcellus
ENSPKIG00000005427	ythdf1	100	71.103	ENSCCAG00000024650	YTHDF1	100	69.123	Cebus_capucinus
ENSPKIG00000005427	ythdf1	100	71.278	ENSCATG00000033272	YTHDF1	100	69.298	Cercocebus_atys
ENSPKIG00000005427	ythdf1	100	70.035	ENSCLAG00000005989	YTHDF1	100	68.586	Chinchilla_lanigera
ENSPKIG00000005427	ythdf1	100	71.278	ENSCSAG00000016266	YTHDF1	100	69.298	Chlorocebus_sabaeus
ENSPKIG00000005427	ythdf1	100	71.652	ENSCPBG00000027183	YTHDF1	100	69.861	Chrysemys_picta_bellii
ENSPKIG00000005427	ythdf1	97	72.022	ENSCANG00000029082	YTHDF1	97	69.982	Colobus_angolensis_palliatus
ENSPKIG00000005427	ythdf1	100	69.416	ENSCGRG00001016568	Ythdf1	100	69.755	Cricetulus_griseus_chok1gshd
ENSPKIG00000005427	ythdf1	97	70.088	ENSCGRG00000009207	Ythdf1	99	70.450	Cricetulus_griseus_crigri
ENSPKIG00000005427	ythdf1	96	72.777	ENSCSEG00000020623	YTHDF1	99	74.067	Cynoglossus_semilaevis
ENSPKIG00000005427	ythdf1	98	75.000	ENSCVAG00000014378	YTHDF1	99	74.373	Cyprinodon_variegatus
ENSPKIG00000005427	ythdf1	99	70.766	ENSCVAG00000017940	ythdf1	98	71.986	Cyprinodon_variegatus
ENSPKIG00000005427	ythdf1	100	70.804	ENSDNOG00000043590	YTHDF1	100	69.056	Dasypus_novemcinctus
ENSPKIG00000005427	ythdf1	99	68.617	ENSDORG00000002879	Ythdf1	96	68.028	Dipodomys_ordii
ENSPKIG00000005427	ythdf1	74	59.398	ENSETEG00000017860	-	99	54.658	Echinops_telfairi
ENSPKIG00000005427	ythdf1	100	70.403	ENSEASG00005023186	YTHDF1	100	69.298	Equus_asinus_asinus
ENSPKIG00000005427	ythdf1	98	70.285	ENSECAG00000019475	YTHDF1	100	69.423	Equus_caballus
ENSPKIG00000005427	ythdf1	92	71.509	ENSEEUG00000007461	YTHDF1	100	69.772	Erinaceus_europaeus
ENSPKIG00000005427	ythdf1	94	72.072	ENSELUG00000001906	YTHDF1	99	72.812	Esox_lucius
ENSPKIG00000005427	ythdf1	99	72.362	ENSELUG00000022768	ythdf1	99	70.921	Esox_lucius
ENSPKIG00000005427	ythdf1	100	70.753	ENSFCAG00000008917	YTHDF1	100	69.474	Felis_catus
ENSPKIG00000005427	ythdf1	100	71.902	ENSFALG00000010463	YTHDF1	100	70.035	Ficedula_albicollis
ENSPKIG00000005427	ythdf1	100	70.475	ENSFDAG00000019602	YTHDF1	100	68.838	Fukomys_damarensis
ENSPKIG00000005427	ythdf1	98	76.429	ENSFHEG00000002540	YTHDF1	99	74.194	Fundulus_heteroclitus
ENSPKIG00000005427	ythdf1	99	72.371	ENSFHEG00000023218	ythdf1	99	72.291	Fundulus_heteroclitus
ENSPKIG00000005427	ythdf1	84	90.576	ENSGMOG00000019610	ythdf1	78	90.576	Gadus_morhua
ENSPKIG00000005427	ythdf1	100	71.826	ENSGALG00000005745	YTHDF1	100	69.618	Gallus_gallus
ENSPKIG00000005427	ythdf1	98	73.921	ENSGAFG00000021100	YTHDF1	99	73.393	Gambusia_affinis
ENSPKIG00000005427	ythdf1	100	73.356	ENSGACG00000002613	YTHDF1	100	72.835	Gasterosteus_aculeatus
ENSPKIG00000005427	ythdf1	96	71.522	ENSGACG00000012014	ythdf1	99	70.772	Gasterosteus_aculeatus
ENSPKIG00000005427	ythdf1	100	71.826	ENSGAGG00000003007	YTHDF1	100	70.105	Gopherus_agassizii
ENSPKIG00000005427	ythdf1	100	71.154	ENSGGOG00000008340	YTHDF1	100	69.123	Gorilla_gorilla
ENSPKIG00000005427	ythdf1	100	74.781	ENSHBUG00000004875	YTHDF1	100	74.256	Haplochromis_burtoni
ENSPKIG00000005427	ythdf1	96	71.254	ENSHBUG00000011284	ythdf1	99	70.962	Haplochromis_burtoni
ENSPKIG00000005427	ythdf1	100	69.947	ENSHGLG00000006585	YTHDF1	100	68.310	Heterocephalus_glaber_female
ENSPKIG00000005427	ythdf1	100	69.947	ENSHGLG00100004683	YTHDF1	100	68.310	Heterocephalus_glaber_male
ENSPKIG00000005427	ythdf1	100	69.329	ENSHCOG00000011303	YTHDF1	100	72.998	Hippocampus_comes
ENSPKIG00000005427	ythdf1	97	74.549	ENSIPUG00000000425	Ythdf1	97	74.054	Ictalurus_punctatus
ENSPKIG00000005427	ythdf1	97	71.119	ENSSTOG00000023001	YTHDF1	98	68.829	Ictidomys_tridecemlineatus
ENSPKIG00000005427	ythdf1	97	70.265	ENSJJAG00000013589	Ythdf1	99	70.344	Jaculus_jaculus
ENSPKIG00000005427	ythdf1	98	76.079	ENSKMAG00000017472	YTHDF1	99	75.180	Kryptolebias_marmoratus
ENSPKIG00000005427	ythdf1	96	70.968	ENSKMAG00000005595	ythdf1	99	71.352	Kryptolebias_marmoratus
ENSPKIG00000005427	ythdf1	96	73.237	ENSLBEG00000014105	ythdf1	96	73.097	Labrus_bergylta
ENSPKIG00000005427	ythdf1	100	73.333	ENSLBEG00000012068	YTHDF1	100	73.090	Labrus_bergylta
ENSPKIG00000005427	ythdf1	96	71.479	ENSLACG00000014195	YTHDF1	98	71.351	Latimeria_chalumnae
ENSPKIG00000005427	ythdf1	100	71.786	ENSLOCG00000005020	ythdf1	99	72.819	Lepisosteus_oculatus
ENSPKIG00000005427	ythdf1	100	72.049	ENSLAFG00000008884	YTHDF1	100	69.739	Loxodonta_africana
ENSPKIG00000005427	ythdf1	100	71.278	ENSMFAG00000042868	YTHDF1	100	69.298	Macaca_fascicularis
ENSPKIG00000005427	ythdf1	100	71.278	ENSMMUG00000009227	YTHDF1	100	69.298	Macaca_mulatta
ENSPKIG00000005427	ythdf1	100	71.278	ENSMNEG00000030851	YTHDF1	100	69.298	Macaca_nemestrina
ENSPKIG00000005427	ythdf1	97	72.202	ENSMLEG00000009252	YTHDF1	99	70.163	Mandrillus_leucophaeus
ENSPKIG00000005427	ythdf1	100	75.610	ENSMAMG00000011072	YTHDF1	100	73.997	Mastacembelus_armatus
ENSPKIG00000005427	ythdf1	96	72.793	ENSMAMG00000024255	ythdf1	99	70.906	Mastacembelus_armatus
ENSPKIG00000005427	ythdf1	100	74.781	ENSMZEG00005023596	YTHDF1	100	74.256	Maylandia_zebra
ENSPKIG00000005427	ythdf1	96	72.566	ENSMZEG00005026397	ythdf1	99	72.077	Maylandia_zebra
ENSPKIG00000005427	ythdf1	97	72.581	ENSMGAG00000006139	YTHDF1	97	70.304	Meleagris_gallopavo
ENSPKIG00000005427	ythdf1	100	69.244	ENSMAUG00000017660	Ythdf1	100	69.580	Mesocricetus_auratus
ENSPKIG00000005427	ythdf1	100	69.416	ENSMICG00000032266	YTHDF1	100	70.000	Microcebus_murinus
ENSPKIG00000005427	ythdf1	100	71.278	ENSMOCG00000013573	Ythdf1	100	69.580	Microtus_ochrogaster
ENSPKIG00000005427	ythdf1	91	71.374	ENSMODG00000016842	YTHDF1	100	69.714	Monodelphis_domestica
ENSPKIG00000005427	ythdf1	100	73.921	ENSMALG00000022209	YTHDF1	100	73.427	Monopterus_albus
ENSPKIG00000005427	ythdf1	96	72.549	ENSMALG00000015672	ythdf1	98	71.853	Monopterus_albus
ENSPKIG00000005427	ythdf1	100	68.900	MGP_CAROLIEiJ_G0024790	Ythdf1	100	69.056	Mus_caroli
ENSPKIG00000005427	ythdf1	100	68.900	ENSMUSG00000038848	Ythdf1	100	69.056	Mus_musculus
ENSPKIG00000005427	ythdf1	100	68.557	MGP_PahariEiJ_G0026237	Ythdf1	100	68.706	Mus_pahari
ENSPKIG00000005427	ythdf1	100	68.900	MGP_SPRETEiJ_G0025715	Ythdf1	100	69.056	Mus_spretus
ENSPKIG00000005427	ythdf1	91	66.852	ENSMPUG00000008111	YTHDF1	100	69.691	Mustela_putorius_furo
ENSPKIG00000005427	ythdf1	98	72.531	ENSMLUG00000002241	YTHDF1	97	70.270	Myotis_lucifugus
ENSPKIG00000005427	ythdf1	100	69.759	ENSNGAG00000000334	Ythdf1	100	69.755	Nannospalax_galili
ENSPKIG00000005427	ythdf1	99	70.052	ENSNBRG00000008213	ythdf1	99	70.224	Neolamprologus_brichardi
ENSPKIG00000005427	ythdf1	100	74.781	ENSNBRG00000015321	YTHDF1	100	74.256	Neolamprologus_brichardi
ENSPKIG00000005427	ythdf1	95	67.222	ENSOPRG00000001758	-	99	65.625	Ochotona_princeps
ENSPKIG00000005427	ythdf1	96	56.194	ENSODEG00000000074	-	100	56.153	Octodon_degus
ENSPKIG00000005427	ythdf1	100	69.580	ENSODEG00000004380	-	100	68.761	Octodon_degus
ENSPKIG00000005427	ythdf1	100	72.049	ENSOANG00000003723	YTHDF1	100	70.139	Ornithorhynchus_anatinus
ENSPKIG00000005427	ythdf1	98	74.643	ENSORLG00000009739	YTHDF1	99	73.477	Oryzias_latipes
ENSPKIG00000005427	ythdf1	98	75.180	ENSORLG00020001332	YTHDF1	99	73.835	Oryzias_latipes_hni
ENSPKIG00000005427	ythdf1	98	74.286	ENSORLG00015018321	YTHDF1	99	73.118	Oryzias_latipes_hsok
ENSPKIG00000005427	ythdf1	96	70.599	ENSOMEG00000002941	YTHDF1	99	70.819	Oryzias_melastigma
ENSPKIG00000005427	ythdf1	100	70.228	ENSOGAG00000000480	YTHDF1	100	68.947	Otolemur_garnettii
ENSPKIG00000005427	ythdf1	97	72.072	ENSPPAG00000023277	YTHDF1	98	69.982	Pan_paniscus
ENSPKIG00000005427	ythdf1	100	70.928	ENSPPRG00000020805	YTHDF1	100	69.474	Panthera_pardus
ENSPKIG00000005427	ythdf1	100	71.154	ENSPTRG00000013730	YTHDF1	100	69.123	Pan_troglodytes
ENSPKIG00000005427	ythdf1	100	71.278	ENSPANG00000021472	YTHDF1	100	69.298	Papio_anubis
ENSPKIG00000005427	ythdf1	96	72.283	ENSPSIG00000005529	YTHDF1	97	70.088	Pelodiscus_sinensis
ENSPKIG00000005427	ythdf1	96	70.650	ENSPMGG00000015328	ythdf1	99	69.244	Periophthalmus_magnuspinnatus
ENSPKIG00000005427	ythdf1	97	70.088	ENSPEMG00000020199	Ythdf1	100	69.495	Peromyscus_maniculatus_bairdii
ENSPKIG00000005427	ythdf1	99	70.660	ENSPCIG00000017170	YTHDF1	100	69.714	Phascolarctos_cinereus
ENSPKIG00000005427	ythdf1	100	70.519	ENSPFOG00000005405	ythdf1	99	71.005	Poecilia_formosa
ENSPKIG00000005427	ythdf1	99	73.322	ENSPLAG00000006653	ythdf1	99	73.805	Poecilia_latipinna
ENSPKIG00000005427	ythdf1	99	73.050	ENSPMEG00000023753	ythdf1	99	73.498	Poecilia_mexicana
ENSPKIG00000005427	ythdf1	100	73.427	ENSPMEG00000020969	-	100	72.522	Poecilia_mexicana
ENSPKIG00000005427	ythdf1	99	72.824	ENSPREG00000002173	ythdf1	99	74.159	Poecilia_reticulata
ENSPKIG00000005427	ythdf1	84	87.562	ENSPPYG00000011226	YTHDF1	97	87.562	Pongo_abelii
ENSPKIG00000005427	ythdf1	89	70.646	ENSPCAG00000002452	YTHDF1	100	68.522	Procavia_capensis
ENSPKIG00000005427	ythdf1	100	69.588	ENSPCOG00000025969	YTHDF1	100	69.649	Propithecus_coquereli
ENSPKIG00000005427	ythdf1	96	70.588	ENSPVAG00000017568	YTHDF1	99	68.206	Pteropus_vampyrus
ENSPKIG00000005427	ythdf1	96	72.566	ENSPNYG00000014007	ythdf1	99	72.077	Pundamilia_nyererei
ENSPKIG00000005427	ythdf1	100	74.781	ENSPNYG00000002266	YTHDF1	100	74.256	Pundamilia_nyererei
ENSPKIG00000005427	ythdf1	100	69.072	ENSRNOG00000027015	Ythdf1	100	69.231	Rattus_norvegicus
ENSPKIG00000005427	ythdf1	100	70.753	ENSRBIG00000044959	YTHDF1	100	68.772	Rhinopithecus_bieti
ENSPKIG00000005427	ythdf1	100	70.753	ENSRROG00000033014	YTHDF1	100	68.772	Rhinopithecus_roxellana
ENSPKIG00000005427	ythdf1	98	70.018	ENSSBOG00000027278	YTHDF1	100	68.462	Saimiri_boliviensis_boliviensis
ENSPKIG00000005427	ythdf1	97	71.201	ENSSHAG00000010430	YTHDF1	87	70.789	Sarcophilus_harrisii
ENSPKIG00000005427	ythdf1	100	72.712	ENSSFOG00015000284	ythdf1	99	73.289	Scleropages_formosus
ENSPKIG00000005427	ythdf1	95	77.519	ENSSMAG00000007635	YTHDF1	98	72.344	Scophthalmus_maximus
ENSPKIG00000005427	ythdf1	90	64.822	ENSSMAG00000013715	ythdf1	96	66.798	Scophthalmus_maximus
ENSPKIG00000005427	ythdf1	97	76.354	ENSSDUG00000015823	YTHDF1	97	74.910	Seriola_dumerili
ENSPKIG00000005427	ythdf1	96	73.488	ENSSDUG00000000435	ythdf1	98	72.855	Seriola_dumerili
ENSPKIG00000005427	ythdf1	91	72.137	ENSSPUG00000015143	YTHDF1	100	69.981	Sphenodon_punctatus
ENSPKIG00000005427	ythdf1	100	74.826	ENSSPAG00000003666	YTHDF1	100	74.306	Stegastes_partitus
ENSPKIG00000005427	ythdf1	100	71.002	ENSSSCG00000040086	YTHDF1	100	70.826	Sus_scrofa
ENSPKIG00000005427	ythdf1	97	72.581	ENSTGUG00000007565	YTHDF1	98	70.662	Taeniopygia_guttata
ENSPKIG00000005427	ythdf1	100	73.333	ENSTNIG00000003975	YTHDF1	100	71.252	Tetraodon_nigroviridis
ENSPKIG00000005427	ythdf1	99	71.951	ENSTNIG00000012490	ythdf1	99	71.025	Tetraodon_nigroviridis
ENSPKIG00000005427	ythdf1	99	69.858	ENSTTRG00000001804	YTHDF1	99	68.384	Tursiops_truncatus
ENSPKIG00000005427	ythdf1	98	72.122	ENSUAMG00000011021	YTHDF1	100	70.115	Ursus_americanus
ENSPKIG00000005427	ythdf1	91	71.209	ENSUMAG00000022290	YTHDF1	100	70.115	Ursus_maritimus
ENSPKIG00000005427	ythdf1	91	71.346	ENSVVUG00000015275	YTHDF1	99	69.171	Vulpes_vulpes
ENSPKIG00000005427	ythdf1	96	72.842	ENSXETG00000027086	ythdf1	96	70.270	Xenopus_tropicalis
ENSPKIG00000005427	ythdf1	98	71.993	ENSXCOG00000002490	ythdf1	95	73.333	Xiphophorus_couchianus
ENSPKIG00000005427	ythdf1	100	70.017	ENSXMAG00000008525	ythdf1	98	72.906	Xiphophorus_maculatus
ENSPKIG00000005427	ythdf1	98	75.180	ENSXMAG00000015644	YTHDF1	99	74.373	Xiphophorus_maculatus