EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000005434 (Gene tree)
Gene ID: 111860866
Gene Symbol: srrt
Alias: -
Full Name: serrate RNA effector molecule homolog (Arabidopsis)
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 9030 bases
Position: chrPGUA01000042.1:411238-420267
Accession: ZDB-GENE-020419-13
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000020817	ARS2	PF04959.13	5.7e-94	1	1
ENSPKIP00000020883	ARS2	PF04959.13	2.5e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000001440	-	3632	-	ENSPKIP00000020817	899 (aa)	-	-
ENSPKIT00000001507	-	2550	-	ENSPKIP00000020883	849 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000005434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000005434	srrt	94	73.882	ENSPKIG00000022212	-	98	73.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005434	srrt	54	79.526	ENSG00000087087	SRRT	98	86.957	Homo_sapiens
ENSPKIG00000005434	srrt	82	80.736	ENSAPOG00000002304	srrt	98	74.688	Acanthochromis_polyacanthus
ENSPKIG00000005434	srrt	96	68.621	ENSAMEG00000014506	SRRT	96	66.820	Ailuropoda_melanoleuca
ENSPKIG00000005434	srrt	95	73.276	ENSACIG00000015795	srrt	94	80.591	Amphilophus_citrinellus
ENSPKIG00000005434	srrt	95	73.522	ENSAOCG00000009693	srrt	93	80.591	Amphiprion_ocellaris
ENSPKIG00000005434	srrt	92	56.840	ENSAOCG00000009189	-	96	59.155	Amphiprion_ocellaris
ENSPKIG00000005434	srrt	95	72.660	ENSAPEG00000003646	srrt	94	80.380	Amphiprion_percula
ENSPKIG00000005434	srrt	92	56.840	ENSAPEG00000020016	-	96	59.155	Amphiprion_percula
ENSPKIG00000005434	srrt	55	65.618	ENSATEG00000003652	-	89	65.112	Anabas_testudineus
ENSPKIG00000005434	srrt	95	73.419	ENSATEG00000014425	srrt	92	80.761	Anabas_testudineus
ENSPKIG00000005434	srrt	55	77.186	ENSACAG00000001014	SRRT	98	67.485	Anolis_carolinensis
ENSPKIG00000005434	srrt	54	79.015	ENSANAG00000031718	SRRT	96	68.508	Aotus_nancymaae
ENSPKIG00000005434	srrt	79	65.401	ENSACLG00000009423	-	96	56.562	Astatotilapia_calliptera
ENSPKIG00000005434	srrt	95	72.982	ENSACLG00000013156	srrt	94	71.296	Astatotilapia_calliptera
ENSPKIG00000005434	srrt	95	77.310	ENSAMXG00000016671	srrt	95	78.082	Astyanax_mexicanus
ENSPKIG00000005434	srrt	54	79.015	ENSBTAG00000001134	SRRT	96	68.230	Bos_taurus
ENSPKIG00000005434	srrt	76	37.865	WBGene00017085	E01A2.2	93	37.383	Caenorhabditis_elegans
ENSPKIG00000005434	srrt	54	78.801	ENSCJAG00000014917	SRRT	96	68.941	Callithrix_jacchus
ENSPKIG00000005434	srrt	96	67.955	ENSCAFG00000023538	SRRT	96	68.897	Canis_familiaris
ENSPKIG00000005434	srrt	98	67.303	ENSCAFG00020013358	SRRT	99	67.271	Canis_lupus_dingo
ENSPKIG00000005434	srrt	90	79.526	ENSCHIG00000010495	SRRT	96	68.897	Capra_hircus
ENSPKIG00000005434	srrt	95	66.207	ENSTSYG00000036426	SRRT	99	67.376	Carlito_syrichta
ENSPKIG00000005434	srrt	54	78.788	ENSCAPG00000013586	SRRT	100	68.616	Cavia_aperea
ENSPKIG00000005434	srrt	54	78.632	ENSCPOG00000001739	SRRT	96	69.285	Cavia_porcellus
ENSPKIG00000005434	srrt	54	79.015	ENSCCAG00000015877	SRRT	96	68.978	Cebus_capucinus
ENSPKIG00000005434	srrt	54	79.526	ENSCATG00000036306	SRRT	97	68.107	Cercocebus_atys
ENSPKIG00000005434	srrt	96	68.839	ENSCLAG00000007568	SRRT	96	71.000	Chinchilla_lanigera
ENSPKIG00000005434	srrt	54	79.015	ENSCSAG00000017996	SRRT	96	68.860	Chlorocebus_sabaeus
ENSPKIG00000005434	srrt	56	71.975	ENSCHOG00000007815	SRRT	71	69.048	Choloepus_hoffmanni
ENSPKIG00000005434	srrt	76	71.103	ENSCPBG00000011553	SRRT	87	70.000	Chrysemys_picta_bellii
ENSPKIG00000005434	srrt	100	42.431	ENSCING00000003506	-	86	45.046	Ciona_intestinalis
ENSPKIG00000005434	srrt	100	43.417	ENSCSAVG00000008394	-	89	58.621	Ciona_savignyi
ENSPKIG00000005434	srrt	54	79.526	ENSCANG00000034556	SRRT	96	68.514	Colobus_angolensis_palliatus
ENSPKIG00000005434	srrt	96	66.705	ENSCGRG00001001594	Srrt	96	68.427	Cricetulus_griseus_chok1gshd
ENSPKIG00000005434	srrt	91	76.582	ENSCGRG00000007292	Srrt	96	71.116	Cricetulus_griseus_crigri
ENSPKIG00000005434	srrt	98	68.575	ENSCSEG00000017878	srrt	98	66.181	Cynoglossus_semilaevis
ENSPKIG00000005434	srrt	72	64.744	ENSCSEG00000005233	-	96	55.235	Cynoglossus_semilaevis
ENSPKIG00000005434	srrt	95	74.620	ENSCVAG00000019848	srrt	98	72.985	Cyprinodon_variegatus
ENSPKIG00000005434	srrt	90	55.199	ENSCVAG00000017344	-	95	56.429	Cyprinodon_variegatus
ENSPKIG00000005434	srrt	95	80.604	ENSDARG00000017762	srrt	98	80.543	Danio_rerio
ENSPKIG00000005434	srrt	54	79.015	ENSDNOG00000003851	SRRT	96	68.662	Dasypus_novemcinctus
ENSPKIG00000005434	srrt	54	78.205	ENSDORG00000005584	Srrt	96	72.032	Dipodomys_ordii
ENSPKIG00000005434	srrt	100	40.863	FBgn0033062	Ars2	69	51.613	Drosophila_melanogaster
ENSPKIG00000005434	srrt	84	70.500	ENSETEG00000016175	SRRT	75	74.194	Echinops_telfairi
ENSPKIG00000005434	srrt	77	54.217	ENSEBUG00000008517	-	88	53.293	Eptatretus_burgeri
ENSPKIG00000005434	srrt	54	79.015	ENSEASG00005016956	SRRT	96	69.014	Equus_asinus_asinus
ENSPKIG00000005434	srrt	54	79.015	ENSECAG00000012292	SRRT	96	69.014	Equus_caballus
ENSPKIG00000005434	srrt	81	76.220	ENSEEUG00000009117	SRRT	81	78.125	Erinaceus_europaeus
ENSPKIG00000005434	srrt	95	78.057	ENSELUG00000006651	srrt	95	71.900	Esox_lucius
ENSPKIG00000005434	srrt	92	59.181	ENSELUG00000021216	-	96	59.931	Esox_lucius
ENSPKIG00000005434	srrt	54	78.801	ENSFCAG00000006855	SRRT	96	68.897	Felis_catus
ENSPKIG00000005434	srrt	56	54.605	ENSFALG00000007524	-	89	57.732	Ficedula_albicollis
ENSPKIG00000005434	srrt	54	73.134	ENSFDAG00000021347	SRRT	96	67.343	Fukomys_damarensis
ENSPKIG00000005434	srrt	55	58.750	ENSFHEG00000004105	-	100	57.058	Fundulus_heteroclitus
ENSPKIG00000005434	srrt	84	78.261	ENSFHEG00000002756	srrt	97	79.562	Fundulus_heteroclitus
ENSPKIG00000005434	srrt	95	70.116	ENSGMOG00000018619	srrt	98	66.129	Gadus_morhua
ENSPKIG00000005434	srrt	64	67.269	ENSGMOG00000018694	-	98	76.812	Gadus_morhua
ENSPKIG00000005434	srrt	95	73.185	ENSGAFG00000005423	srrt	98	73.295	Gambusia_affinis
ENSPKIG00000005434	srrt	92	55.306	ENSGAFG00000020383	-	96	56.250	Gambusia_affinis
ENSPKIG00000005434	srrt	95	73.605	ENSGACG00000020387	srrt	98	73.311	Gasterosteus_aculeatus
ENSPKIG00000005434	srrt	92	53.341	ENSGACG00000001100	-	96	55.723	Gasterosteus_aculeatus
ENSPKIG00000005434	srrt	54	79.526	ENSGGOG00000001508	SRRT	96	68.720	Gorilla_gorilla
ENSPKIG00000005434	srrt	50	82.561	ENSHBUG00000002942	srrt	94	72.902	Haplochromis_burtoni
ENSPKIG00000005434	srrt	96	66.930	ENSHGLG00000008344	Srrt	96	70.741	Heterocephalus_glaber_female
ENSPKIG00000005434	srrt	96	67.537	ENSHGLG00100018857	Srrt	96	71.831	Heterocephalus_glaber_male
ENSPKIG00000005434	srrt	98	71.477	ENSHCOG00000005403	srrt	98	76.956	Hippocampus_comes
ENSPKIG00000005434	srrt	92	55.626	ENSHCOG00000008904	-	95	56.654	Hippocampus_comes
ENSPKIG00000005434	srrt	92	78.443	ENSIPUG00000021150	srrt	98	78.143	Ictalurus_punctatus
ENSPKIG00000005434	srrt	54	79.526	ENSSTOG00000013776	SRRT	96	69.258	Ictidomys_tridecemlineatus
ENSPKIG00000005434	srrt	96	68.270	ENSJJAG00000010446	Srrt	96	71.717	Jaculus_jaculus
ENSPKIG00000005434	srrt	95	73.302	ENSKMAG00000013599	srrt	98	72.955	Kryptolebias_marmoratus
ENSPKIG00000005434	srrt	55	63.450	ENSKMAG00000008468	-	96	55.944	Kryptolebias_marmoratus
ENSPKIG00000005434	srrt	57	64.452	ENSLBEG00000028983	-	79	64.883	Labrus_bergylta
ENSPKIG00000005434	srrt	98	74.880	ENSLBEG00000016308	srrt	98	74.399	Labrus_bergylta
ENSPKIG00000005434	srrt	95	59.976	ENSLACG00000001089	SRRT	98	60.495	Latimeria_chalumnae
ENSPKIG00000005434	srrt	80	80.263	ENSLOCG00000013658	srrt	100	66.627	Lepisosteus_oculatus
ENSPKIG00000005434	srrt	54	79.015	ENSLAFG00000007725	SRRT	96	68.941	Loxodonta_africana
ENSPKIG00000005434	srrt	54	79.526	ENSMFAG00000033745	SRRT	99	68.187	Macaca_fascicularis
ENSPKIG00000005434	srrt	96	65.955	ENSMMUG00000021255	SRRT	96	68.860	Macaca_mulatta
ENSPKIG00000005434	srrt	54	79.015	ENSMNEG00000041864	SRRT	97	68.187	Macaca_nemestrina
ENSPKIG00000005434	srrt	54	79.526	ENSMLEG00000029479	SRRT	98	68.187	Mandrillus_leucophaeus
ENSPKIG00000005434	srrt	74	67.568	ENSMAMG00000010681	-	96	58.284	Mastacembelus_armatus
ENSPKIG00000005434	srrt	54	79.783	ENSMAMG00000014311	srrt	98	75.057	Mastacembelus_armatus
ENSPKIG00000005434	srrt	50	82.340	ENSMZEG00005016135	srrt	94	72.676	Maylandia_zebra
ENSPKIG00000005434	srrt	79	65.612	ENSMZEG00005028002	-	96	56.678	Maylandia_zebra
ENSPKIG00000005434	srrt	54	78.801	ENSMAUG00000011386	Srrt	96	71.486	Mesocricetus_auratus
ENSPKIG00000005434	srrt	54	79.229	ENSMICG00000009471	SRRT	98	68.568	Microcebus_murinus
ENSPKIG00000005434	srrt	54	79.015	ENSMOCG00000001971	Srrt	96	71.888	Microtus_ochrogaster
ENSPKIG00000005434	srrt	83	53.979	ENSMMOG00000011137	-	99	51.777	Mola_mola
ENSPKIG00000005434	srrt	95	72.346	ENSMMOG00000016399	srrt	98	73.646	Mola_mola
ENSPKIG00000005434	srrt	54	75.687	ENSMODG00000004862	SRRT	97	71.875	Monodelphis_domestica
ENSPKIG00000005434	srrt	57	51.224	ENSMALG00000005567	-	90	51.837	Monopterus_albus
ENSPKIG00000005434	srrt	90	70.247	ENSMALG00000018604	srrt	99	65.035	Monopterus_albus
ENSPKIG00000005434	srrt	96	68.276	MGP_CAROLIEiJ_G0027870	Srrt	95	78.125	Mus_caroli
ENSPKIG00000005434	srrt	96	68.276	ENSMUSG00000037364	Srrt	95	78.125	Mus_musculus
ENSPKIG00000005434	srrt	54	79.221	MGP_PahariEiJ_G0024456	Srrt	95	78.125	Mus_pahari
ENSPKIG00000005434	srrt	96	68.276	MGP_SPRETEiJ_G0028875	Srrt	95	78.125	Mus_spretus
ENSPKIG00000005434	srrt	54	79.015	ENSMPUG00000015839	SRRT	96	68.897	Mustela_putorius_furo
ENSPKIG00000005434	srrt	54	78.801	ENSMLUG00000009975	SRRT	96	68.779	Myotis_lucifugus
ENSPKIG00000005434	srrt	54	79.015	ENSNGAG00000023715	Srrt	100	68.022	Nannospalax_galili
ENSPKIG00000005434	srrt	54	79.783	ENSNBRG00000019100	srrt	98	70.081	Neolamprologus_brichardi
ENSPKIG00000005434	srrt	86	70.067	ENSNLEG00000011987	SRRT	100	63.438	Nomascus_leucogenys
ENSPKIG00000005434	srrt	96	56.124	ENSMEUG00000011941	SRRT	96	56.480	Notamacropus_eugenii
ENSPKIG00000005434	srrt	64	78.788	ENSOPRG00000002502	-	67	78.788	Ochotona_princeps
ENSPKIG00000005434	srrt	54	79.004	ENSODEG00000016856	SRRT	96	71.515	Octodon_degus
ENSPKIG00000005434	srrt	51	66.879	ENSONIG00000016080	-	95	57.710	Oreochromis_niloticus
ENSPKIG00000005434	srrt	86	80.519	ENSONIG00000004242	srrt	98	71.152	Oreochromis_niloticus
ENSPKIG00000005434	srrt	98	71.818	ENSORLG00000008120	srrt	98	69.792	Oryzias_latipes
ENSPKIG00000005434	srrt	98	71.477	ENSORLG00020003058	srrt	98	69.560	Oryzias_latipes_hni
ENSPKIG00000005434	srrt	98	71.705	ENSORLG00015008062	srrt	98	69.676	Oryzias_latipes_hsok
ENSPKIG00000005434	srrt	98	71.932	ENSOMEG00000003155	srrt	95	79.830	Oryzias_melastigma
ENSPKIG00000005434	srrt	92	57.125	ENSOMEG00000006963	-	96	57.995	Oryzias_melastigma
ENSPKIG00000005434	srrt	54	79.015	ENSOGAG00000017242	SRRT	96	69.601	Otolemur_garnettii
ENSPKIG00000005434	srrt	54	79.526	ENSOARG00000015645	SRRT	96	68.551	Ovis_aries
ENSPKIG00000005434	srrt	54	79.526	ENSPPAG00000041090	SRRT	96	68.831	Pan_paniscus
ENSPKIG00000005434	srrt	54	78.879	ENSPPRG00000009557	SRRT	96	69.022	Panthera_pardus
ENSPKIG00000005434	srrt	54	78.801	ENSPTIG00000014355	SRRT	96	68.779	Panthera_tigris_altaica
ENSPKIG00000005434	srrt	54	79.526	ENSPTRG00000019511	SRRT	100	66.510	Pan_troglodytes
ENSPKIG00000005434	srrt	54	77.684	ENSPANG00000020763	SRRT	97	68.187	Papio_anubis
ENSPKIG00000005434	srrt	54	77.489	ENSPSIG00000016311	SRRT	98	67.285	Pelodiscus_sinensis
ENSPKIG00000005434	srrt	98	69.663	ENSPMGG00000002841	srrt	98	70.624	Periophthalmus_magnuspinnatus
ENSPKIG00000005434	srrt	54	79.221	ENSPEMG00000010834	Srrt	96	71.717	Peromyscus_maniculatus_bairdii
ENSPKIG00000005434	srrt	96	54.850	ENSPMAG00000009614	-	95	55.329	Petromyzon_marinus
ENSPKIG00000005434	srrt	96	63.371	ENSPCIG00000000816	SRRT	96	67.685	Phascolarctos_cinereus
ENSPKIG00000005434	srrt	95	73.450	ENSPFOG00000005704	srrt	98	73.439	Poecilia_formosa
ENSPKIG00000005434	srrt	92	54.944	ENSPFOG00000016554	-	96	56.574	Poecilia_formosa
ENSPKIG00000005434	srrt	54	63.441	ENSPLAG00000004526	-	96	56.265	Poecilia_latipinna
ENSPKIG00000005434	srrt	95	73.979	ENSPLAG00000021992	srrt	98	74.292	Poecilia_latipinna
ENSPKIG00000005434	srrt	90	54.134	ENSPMEG00000001520	-	95	55.846	Poecilia_mexicana
ENSPKIG00000005434	srrt	95	73.333	ENSPMEG00000001182	srrt	98	73.212	Poecilia_mexicana
ENSPKIG00000005434	srrt	95	73.450	ENSPREG00000022308	srrt	98	73.439	Poecilia_reticulata
ENSPKIG00000005434	srrt	50	72.727	ENSPPYG00000017432	SRRT	95	72.727	Pongo_abelii
ENSPKIG00000005434	srrt	55	73.441	ENSPCAG00000001621	SRRT	96	66.356	Procavia_capensis
ENSPKIG00000005434	srrt	54	79.526	ENSPCOG00000025751	SRRT	96	69.330	Propithecus_coquereli
ENSPKIG00000005434	srrt	68	70.021	ENSPVAG00000000834	SRRT	100	60.260	Pteropus_vampyrus
ENSPKIG00000005434	srrt	50	82.340	ENSPNYG00000018710	srrt	98	72.789	Pundamilia_nyererei
ENSPKIG00000005434	srrt	95	63.584	ENSPNAG00000010629	srrt	97	65.276	Pygocentrus_nattereri
ENSPKIG00000005434	srrt	54	67.527	ENSRNOG00000048277	AABR07035787.1	97	64.959	Rattus_norvegicus
ENSPKIG00000005434	srrt	54	79.015	ENSRBIG00000035718	SRRT	97	68.187	Rhinopithecus_bieti
ENSPKIG00000005434	srrt	54	79.015	ENSRROG00000030622	SRRT	98	68.187	Rhinopithecus_roxellana
ENSPKIG00000005434	srrt	54	79.526	ENSSBOG00000033570	SRRT	96	68.978	Saimiri_boliviensis_boliviensis
ENSPKIG00000005434	srrt	72	65.315	ENSSHAG00000007349	-	100	64.275	Sarcophilus_harrisii
ENSPKIG00000005434	srrt	95	84.687	ENSSFOG00015017293	srrt	98	85.650	Scleropages_formosus
ENSPKIG00000005434	srrt	95	74.356	ENSSMAG00000015342	srrt	92	80.550	Scophthalmus_maximus
ENSPKIG00000005434	srrt	50	66.307	ENSSMAG00000018195	-	95	56.438	Scophthalmus_maximus
ENSPKIG00000005434	srrt	55	53.958	ENSSDUG00000002051	-	99	54.397	Seriola_dumerili
ENSPKIG00000005434	srrt	95	72.727	ENSSDUG00000012049	srrt	98	74.026	Seriola_dumerili
ENSPKIG00000005434	srrt	95	73.300	ENSSLDG00000017477	srrt	91	81.818	Seriola_lalandi_dorsalis
ENSPKIG00000005434	srrt	54	81.641	ENSSPAG00000005665	srrt	96	74.208	Stegastes_partitus
ENSPKIG00000005434	srrt	54	58.315	ENSSPAG00000018943	-	98	57.469	Stegastes_partitus
ENSPKIG00000005434	srrt	76	78.281	ENSSSCG00000024789	SRRT	100	67.391	Sus_scrofa
ENSPKIG00000005434	srrt	90	54.557	ENSTRUG00000000023	-	94	55.240	Takifugu_rubripes
ENSPKIG00000005434	srrt	90	78.431	ENSTRUG00000016075	srrt	98	69.805	Takifugu_rubripes
ENSPKIG00000005434	srrt	92	54.728	ENSTNIG00000003111	-	96	55.088	Tetraodon_nigroviridis
ENSPKIG00000005434	srrt	74	68.182	ENSTNIG00000011779	srrt	100	67.121	Tetraodon_nigroviridis
ENSPKIG00000005434	srrt	61	80.435	ENSTBEG00000005212	SRRT	60	80.435	Tupaia_belangeri
ENSPKIG00000005434	srrt	54	79.015	ENSTTRG00000011104	SRRT	96	68.743	Tursiops_truncatus
ENSPKIG00000005434	srrt	95	66.933	ENSUAMG00000027997	SRRT	98	69.022	Ursus_americanus
ENSPKIG00000005434	srrt	96	66.516	ENSUMAG00000011295	SRRT	96	69.484	Ursus_maritimus
ENSPKIG00000005434	srrt	96	67.955	ENSVVUG00000023572	SRRT	96	68.897	Vulpes_vulpes
ENSPKIG00000005434	srrt	75	80.899	ENSXETG00000025124	srrt	98	59.932	Xenopus_tropicalis
ENSPKIG00000005434	srrt	59	50.000	ENSXCOG00000013105	-	99	50.198	Xiphophorus_couchianus
ENSPKIG00000005434	srrt	92	54.557	ENSXMAG00000002090	-	96	56.130	Xiphophorus_maculatus
ENSPKIG00000005434	srrt	98	73.499	ENSXMAG00000007627	srrt	98	73.295	Xiphophorus_maculatus