EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000005468 (Gene tree)
Gene ID: 111837727
Gene Symbol: polr1a
Alias: -
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 46616 bases
Position: chrPGUA01000062.1:1730326-1776941
Accession: 111837727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000020917	RNA_pol_Rpb1_5	PF04998.17	4.1e-98	1	1
ENSPKIP00000020998	RNA_pol_Rpb1_5	PF04998.17	4.1e-98	1	1
ENSPKIP00000020917	RNA_pol_Rpb1_4	PF05000.17	2.2e-21	1	1
ENSPKIP00000020998	RNA_pol_Rpb1_4	PF05000.17	2.2e-21	1	1
ENSPKIP00000020998	RNA_pol_Rpb1_2	PF00623.20	1.2e-69	1	1
ENSPKIP00000020917	RNA_pol_Rpb1_2	PF00623.20	1.2e-69	1	1
ENSPKIP00000020998	RNA_pol_Rpb1_3	PF04983.18	4.4e-35	1	1
ENSPKIP00000020917	RNA_pol_Rpb1_3	PF04983.18	4.7e-35	1	1
ENSPKIP00000020917	RNA_pol_Rpb1_1	PF04997.12	4.1e-26	1	1
ENSPKIP00000020998	RNA_pol_Rpb1_1	PF04997.12	6.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000001623	-	4878	-	ENSPKIP00000020998	1625 (aa)	-	-
ENSPKIT00000001541	-	5103	XM_023800034	ENSPKIP00000020917	1700 (aa)	XP_023655802	UPI000CD6037F

Gene Model

Click here to download ENSPKIG00000005468's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000005468	polr1a	55	61.728	ENSPKIG00000008140	polr3a	68	64.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005468	polr1a	99	76.389	ENSG00000068654	POLR1A	94	76.389	Homo_sapiens
ENSPKIG00000005468	polr1a	69	74.851	ENSAPOG00000017945	polr1a	99	74.957	Acanthochromis_polyacanthus
ENSPKIG00000005468	polr1a	99	76.389	ENSAMEG00000005807	POLR1A	100	71.443	Ailuropoda_melanoleuca
ENSPKIG00000005468	polr1a	100	71.131	ENSACIG00000022147	polr1a	100	71.070	Amphilophus_citrinellus
ENSPKIG00000005468	polr1a	98	75.735	ENSAOCG00000017336	polr1a	100	74.645	Amphiprion_ocellaris
ENSPKIG00000005468	polr1a	98	75.735	ENSAPEG00000016105	polr1a	100	72.002	Amphiprion_percula
ENSPKIG00000005468	polr1a	99	74.306	ENSATEG00000016773	polr1a	100	71.036	Anabas_testudineus
ENSPKIG00000005468	polr1a	90	66.957	ENSAPLG00000013871	POLR1A	99	67.637	Anas_platyrhynchos
ENSPKIG00000005468	polr1a	98	71.329	ENSACAG00000012141	POLR1A	94	71.329	Anolis_carolinensis
ENSPKIG00000005468	polr1a	99	77.778	ENSANAG00000033927	POLR1A	94	77.778	Aotus_nancymaae
ENSPKIG00000005468	polr1a	100	68.209	ENSACLG00000020541	polr1a	100	68.209	Astatotilapia_calliptera
ENSPKIG00000005468	polr1a	99	74.306	ENSBTAG00000006481	POLR1A	94	74.306	Bos_taurus
ENSPKIG00000005468	polr1a	97	43.165	WBGene00012999	rpoa-1	98	39.966	Caenorhabditis_elegans
ENSPKIG00000005468	polr1a	99	77.778	ENSCJAG00000019547	POLR1A	94	77.778	Callithrix_jacchus
ENSPKIG00000005468	polr1a	99	76.389	ENSCAFG00000007613	POLR1A	94	76.389	Canis_familiaris
ENSPKIG00000005468	polr1a	99	76.389	ENSCAFG00020014752	POLR1A	94	76.389	Canis_lupus_dingo
ENSPKIG00000005468	polr1a	99	74.306	ENSCHIG00000018204	POLR1A	94	74.306	Capra_hircus
ENSPKIG00000005468	polr1a	99	75.694	ENSTSYG00000002761	POLR1A	94	75.694	Carlito_syrichta
ENSPKIG00000005468	polr1a	94	78.723	ENSCAPG00000010132	POLR1A	92	78.723	Cavia_aperea
ENSPKIG00000005468	polr1a	98	77.698	ENSCPOG00000012350	POLR1A	94	77.698	Cavia_porcellus
ENSPKIG00000005468	polr1a	99	77.778	ENSCCAG00000019839	POLR1A	94	77.778	Cebus_capucinus
ENSPKIG00000005468	polr1a	99	77.083	ENSCATG00000029786	POLR1A	94	77.083	Cercocebus_atys
ENSPKIG00000005468	polr1a	99	74.306	ENSCLAG00000005187	POLR1A	94	74.306	Chinchilla_lanigera
ENSPKIG00000005468	polr1a	99	77.083	ENSCSAG00000016251	POLR1A	94	77.083	Chlorocebus_sabaeus
ENSPKIG00000005468	polr1a	98	78.571	ENSCPBG00000001115	POLR1A	94	78.571	Chrysemys_picta_bellii
ENSPKIG00000005468	polr1a	98	52.593	ENSCSAVG00000007184	-	99	50.462	Ciona_savignyi
ENSPKIG00000005468	polr1a	99	76.389	ENSCANG00000031785	POLR1A	94	76.389	Colobus_angolensis_palliatus
ENSPKIG00000005468	polr1a	95	75.853	ENSCGRG00001006651	Polr1a	94	75.853	Cricetulus_griseus_chok1gshd
ENSPKIG00000005468	polr1a	63	64.293	ENSCGRG00000010834	Polr1a	100	64.757	Cricetulus_griseus_crigri
ENSPKIG00000005468	polr1a	100	67.893	ENSCSEG00000020190	polr1a	100	67.874	Cynoglossus_semilaevis
ENSPKIG00000005468	polr1a	98	72.222	ENSCVAG00000020941	polr1a	100	68.743	Cyprinodon_variegatus
ENSPKIG00000005468	polr1a	99	73.311	ENSDARG00000098375	polr1a	100	72.044	Danio_rerio
ENSPKIG00000005468	polr1a	99	73.611	ENSDNOG00000010829	POLR1A	95	73.611	Dasypus_novemcinctus
ENSPKIG00000005468	polr1a	98	75.694	ENSDORG00000008298	Polr1a	94	75.694	Dipodomys_ordii
ENSPKIG00000005468	polr1a	79	44.231	FBgn0019938	RpI1	99	42.690	Drosophila_melanogaster
ENSPKIG00000005468	polr1a	71	84.375	ENSETEG00000000412	-	71	84.375	Echinops_telfairi
ENSPKIG00000005468	polr1a	89	49.286	ENSEBUG00000005667	-	99	48.446	Eptatretus_burgeri
ENSPKIG00000005468	polr1a	99	76.389	ENSEASG00005001625	POLR1A	94	76.389	Equus_asinus_asinus
ENSPKIG00000005468	polr1a	99	75.694	ENSECAG00000010092	POLR1A	100	71.813	Equus_caballus
ENSPKIG00000005468	polr1a	99	75.694	ENSECAG00000030510	-	100	71.813	Equus_caballus
ENSPKIG00000005468	polr1a	99	75.694	ENSECAG00000036306	-	100	71.813	Equus_caballus
ENSPKIG00000005468	polr1a	85	77.389	ENSEEUG00000000676	POLR1A	85	77.389	Erinaceus_europaeus
ENSPKIG00000005468	polr1a	99	79.861	ENSELUG00000012769	polr1a	93	79.861	Esox_lucius
ENSPKIG00000005468	polr1a	99	75.694	ENSFCAG00000008966	POLR1A	94	75.694	Felis_catus
ENSPKIG00000005468	polr1a	97	76.190	ENSFALG00000010082	POLR1A	94	76.190	Ficedula_albicollis
ENSPKIG00000005468	polr1a	99	75.000	ENSFDAG00000013726	POLR1A	94	75.000	Fukomys_damarensis
ENSPKIG00000005468	polr1a	100	67.370	ENSFHEG00000005996	polr1a	100	67.018	Fundulus_heteroclitus
ENSPKIG00000005468	polr1a	100	64.058	ENSGMOG00000002230	polr1a	100	64.745	Gadus_morhua
ENSPKIG00000005468	polr1a	88	72.143	ENSGALG00000038160	-	92	72.143	Gallus_gallus
ENSPKIG00000005468	polr1a	100	69.019	ENSGAFG00000015266	polr1a	100	69.295	Gambusia_affinis
ENSPKIG00000005468	polr1a	98	74.825	ENSGACG00000018791	polr1a	94	74.825	Gasterosteus_aculeatus
ENSPKIG00000005468	polr1a	90	69.127	ENSGAGG00000004984	-	95	74.936	Gopherus_agassizii
ENSPKIG00000005468	polr1a	99	76.389	ENSGGOG00000001788	POLR1A	94	76.389	Gorilla_gorilla
ENSPKIG00000005468	polr1a	91	72.044	ENSHBUG00000020021	polr1a	100	72.156	Haplochromis_burtoni
ENSPKIG00000005468	polr1a	99	74.306	ENSHGLG00000006334	POLR1A	94	74.306	Heterocephalus_glaber_female
ENSPKIG00000005468	polr1a	99	74.306	ENSHGLG00100006614	POLR1A	94	74.306	Heterocephalus_glaber_male
ENSPKIG00000005468	polr1a	100	70.732	ENSHCOG00000003345	polr1a	100	70.671	Hippocampus_comes
ENSPKIG00000005468	polr1a	99	73.986	ENSIPUG00000013174	polr1a	100	72.595	Ictalurus_punctatus
ENSPKIG00000005468	polr1a	98	76.429	ENSSTOG00000012580	POLR1A	94	76.429	Ictidomys_tridecemlineatus
ENSPKIG00000005468	polr1a	99	73.611	ENSJJAG00000013113	Polr1a	100	67.791	Jaculus_jaculus
ENSPKIG00000005468	polr1a	98	72.917	ENSKMAG00000007399	polr1a	100	70.409	Kryptolebias_marmoratus
ENSPKIG00000005468	polr1a	100	70.269	ENSLBEG00000015401	polr1a	98	73.718	Labrus_bergylta
ENSPKIG00000005468	polr1a	53	74.591	ENSLACG00000003218	polr1a	100	74.591	Latimeria_chalumnae
ENSPKIG00000005468	polr1a	99	79.861	ENSLOCG00000010881	polr1a	100	74.171	Lepisosteus_oculatus
ENSPKIG00000005468	polr1a	99	73.611	ENSLAFG00000014948	POLR1A	94	73.611	Loxodonta_africana
ENSPKIG00000005468	polr1a	99	77.083	ENSMFAG00000046097	POLR1A	94	77.083	Macaca_fascicularis
ENSPKIG00000005468	polr1a	99	77.083	ENSMMUG00000015815	POLR1A	94	77.083	Macaca_mulatta
ENSPKIG00000005468	polr1a	99	77.083	ENSMNEG00000043313	POLR1A	94	77.083	Macaca_nemestrina
ENSPKIG00000005468	polr1a	99	77.083	ENSMLEG00000042428	POLR1A	94	77.083	Mandrillus_leucophaeus
ENSPKIG00000005468	polr1a	98	74.056	ENSMAMG00000016565	polr1a	100	71.723	Mastacembelus_armatus
ENSPKIG00000005468	polr1a	98	75.000	ENSMZEG00005004915	polr1a	100	71.630	Maylandia_zebra
ENSPKIG00000005468	polr1a	99	72.143	ENSMGAG00000013111	POLR1A	94	72.143	Meleagris_gallopavo
ENSPKIG00000005468	polr1a	92	66.286	ENSMAUG00000008497	Polr1a	100	66.561	Mesocricetus_auratus
ENSPKIG00000005468	polr1a	99	76.389	ENSMICG00000000757	POLR1A	94	76.389	Microcebus_murinus
ENSPKIG00000005468	polr1a	99	75.694	ENSMOCG00000000122	Polr1a	94	75.694	Microtus_ochrogaster
ENSPKIG00000005468	polr1a	98	74.306	ENSMMOG00000010216	polr1a	100	69.199	Mola_mola
ENSPKIG00000005468	polr1a	98	74.483	ENSMODG00000009335	POLR1A	94	74.483	Monodelphis_domestica
ENSPKIG00000005468	polr1a	98	74.126	ENSMALG00000013363	polr1a	100	71.136	Monopterus_albus
ENSPKIG00000005468	polr1a	99	74.306	MGP_CAROLIEiJ_G0028494	Polr1a	94	74.306	Mus_caroli
ENSPKIG00000005468	polr1a	99	73.611	ENSMUSG00000049553	Polr1a	94	73.611	Mus_musculus
ENSPKIG00000005468	polr1a	99	75.000	MGP_PahariEiJ_G0022230	Polr1a	94	75.000	Mus_pahari
ENSPKIG00000005468	polr1a	99	73.611	MGP_SPRETEiJ_G0029499	Polr1a	94	73.611	Mus_spretus
ENSPKIG00000005468	polr1a	99	75.694	ENSMPUG00000009135	POLR1A	94	75.694	Mustela_putorius_furo
ENSPKIG00000005468	polr1a	99	76.389	ENSMLUG00000015723	POLR1A	94	76.389	Myotis_lucifugus
ENSPKIG00000005468	polr1a	99	74.306	ENSNGAG00000017907	Polr1a	94	74.306	Nannospalax_galili
ENSPKIG00000005468	polr1a	98	75.000	ENSNBRG00000000519	polr1a	100	71.512	Neolamprologus_brichardi
ENSPKIG00000005468	polr1a	99	76.389	ENSNLEG00000002264	POLR1A	94	76.389	Nomascus_leucogenys
ENSPKIG00000005468	polr1a	75	85.827	ENSMEUG00000011665	-	75	85.827	Notamacropus_eugenii
ENSPKIG00000005468	polr1a	94	74.468	ENSOPRG00000008269	POLR1A	91	74.468	Ochotona_princeps
ENSPKIG00000005468	polr1a	99	74.306	ENSODEG00000003542	POLR1A	94	74.306	Octodon_degus
ENSPKIG00000005468	polr1a	98	75.694	ENSONIG00000015895	polr1a	100	70.955	Oreochromis_niloticus
ENSPKIG00000005468	polr1a	99	75.000	ENSOCUG00000010138	POLR1A	94	75.000	Oryctolagus_cuniculus
ENSPKIG00000005468	polr1a	98	72.222	ENSORLG00000008753	polr1a	99	70.685	Oryzias_latipes
ENSPKIG00000005468	polr1a	100	68.878	ENSORLG00020020726	polr1a	99	68.798	Oryzias_latipes_hni
ENSPKIG00000005468	polr1a	95	78.723	ENSORLG00015016071	polr1a	98	78.723	Oryzias_latipes_hsok
ENSPKIG00000005468	polr1a	99	75.000	ENSOGAG00000004031	POLR1A	94	75.000	Otolemur_garnettii
ENSPKIG00000005468	polr1a	99	74.306	ENSOARG00000020601	POLR1A	94	74.306	Ovis_aries
ENSPKIG00000005468	polr1a	99	76.389	ENSPPAG00000042450	POLR1A	94	76.389	Pan_paniscus
ENSPKIG00000005468	polr1a	99	75.694	ENSPPRG00000006702	POLR1A	94	75.694	Panthera_pardus
ENSPKIG00000005468	polr1a	99	75.694	ENSPTIG00000018783	POLR1A	94	75.694	Panthera_tigris_altaica
ENSPKIG00000005468	polr1a	99	76.389	ENSPTRG00000012147	POLR1A	94	76.389	Pan_troglodytes
ENSPKIG00000005468	polr1a	99	77.083	ENSPANG00000025908	POLR1A	94	77.083	Papio_anubis
ENSPKIG00000005468	polr1a	66	65.205	ENSPSIG00000009321	-	99	66.759	Pelodiscus_sinensis
ENSPKIG00000005468	polr1a	54	74.110	ENSPMGG00000009718	polr1a	95	74.944	Periophthalmus_magnuspinnatus
ENSPKIG00000005468	polr1a	99	75.694	ENSPEMG00000022224	Polr1a	94	75.694	Peromyscus_maniculatus_bairdii
ENSPKIG00000005468	polr1a	93	77.083	ENSPCIG00000004222	POLR1A	93	77.083	Phascolarctos_cinereus
ENSPKIG00000005468	polr1a	98	73.611	ENSPFOG00000005025	polr1a	100	70.281	Poecilia_formosa
ENSPKIG00000005468	polr1a	98	73.611	ENSPLAG00000021389	polr1a	100	70.381	Poecilia_latipinna
ENSPKIG00000005468	polr1a	96	72.917	ENSPMEG00000006463	polr1a	100	68.706	Poecilia_mexicana
ENSPKIG00000005468	polr1a	98	72.917	ENSPREG00000002389	polr1a	100	70.492	Poecilia_reticulata
ENSPKIG00000005468	polr1a	99	75.172	ENSPPYG00000012217	POLR1A	94	75.172	Pongo_abelii
ENSPKIG00000005468	polr1a	90	76.078	ENSPCAG00000011582	POLR1A	86	76.078	Procavia_capensis
ENSPKIG00000005468	polr1a	99	76.389	ENSPCOG00000026987	POLR1A	94	76.389	Propithecus_coquereli
ENSPKIG00000005468	polr1a	92	75.694	ENSPVAG00000012674	POLR1A	89	75.694	Pteropus_vampyrus
ENSPKIG00000005468	polr1a	98	75.000	ENSPNYG00000000026	polr1a	100	71.571	Pundamilia_nyererei
ENSPKIG00000005468	polr1a	99	72.942	ENSPNAG00000019223	polr1a	99	73.297	Pygocentrus_nattereri
ENSPKIG00000005468	polr1a	99	72.917	ENSRNOG00000009545	Polr1a	94	72.917	Rattus_norvegicus
ENSPKIG00000005468	polr1a	99	77.083	ENSRBIG00000028335	POLR1A	94	77.083	Rhinopithecus_bieti
ENSPKIG00000005468	polr1a	99	77.083	ENSRROG00000031473	POLR1A	94	77.083	Rhinopithecus_roxellana
ENSPKIG00000005468	polr1a	97	46.094	YOR341W	RPA190	99	36.766	Saccharomyces_cerevisiae
ENSPKIG00000005468	polr1a	99	77.083	ENSSBOG00000030262	POLR1A	94	77.083	Saimiri_boliviensis_boliviensis
ENSPKIG00000005468	polr1a	99	75.000	ENSSHAG00000014739	POLR1A	94	75.000	Sarcophilus_harrisii
ENSPKIG00000005468	polr1a	99	80.556	ENSSFOG00015019716	polr1a	100	79.603	Scleropages_formosus
ENSPKIG00000005468	polr1a	98	73.611	ENSSMAG00000014342	polr1a	100	70.943	Scophthalmus_maximus
ENSPKIG00000005468	polr1a	100	71.320	ENSSDUG00000014631	polr1a	100	71.278	Seriola_dumerili
ENSPKIG00000005468	polr1a	100	70.818	ENSSLDG00000024095	polr1a	100	70.438	Seriola_lalandi_dorsalis
ENSPKIG00000005468	polr1a	68	97.561	ENSSARG00000003136	-	71	97.561	Sorex_araneus
ENSPKIG00000005468	polr1a	99	73.793	ENSSPUG00000004215	POLR1A	95	73.793	Sphenodon_punctatus
ENSPKIG00000005468	polr1a	63	79.171	ENSSPAG00000016341	polr1a	93	79.171	Stegastes_partitus
ENSPKIG00000005468	polr1a	81	77.083	ENSSSCG00000008226	POLR1A	93	77.083	Sus_scrofa
ENSPKIG00000005468	polr1a	97	72.358	ENSTGUG00000010704	POLR1A	100	66.962	Taeniopygia_guttata
ENSPKIG00000005468	polr1a	99	70.833	ENSTRUG00000002210	polr1a	99	68.387	Takifugu_rubripes
ENSPKIG00000005468	polr1a	99	69.444	ENSTNIG00000010116	polr1a	100	63.736	Tetraodon_nigroviridis
ENSPKIG00000005468	polr1a	74	84.513	ENSTBEG00000008646	POLR1A	74	84.513	Tupaia_belangeri
ENSPKIG00000005468	polr1a	98	75.540	ENSTTRG00000008597	POLR1A	94	75.540	Tursiops_truncatus
ENSPKIG00000005468	polr1a	72	66.695	ENSUAMG00000012158	-	94	67.119	Ursus_americanus
ENSPKIG00000005468	polr1a	99	74.306	ENSUMAG00000006700	POLR1A	97	71.398	Ursus_maritimus
ENSPKIG00000005468	polr1a	99	76.389	ENSVVUG00000001245	POLR1A	94	76.389	Vulpes_vulpes
ENSPKIG00000005468	polr1a	99	71.724	ENSXETG00000001952	polr1a	94	71.724	Xenopus_tropicalis
ENSPKIG00000005468	polr1a	100	69.947	ENSXMAG00000004032	polr1a	100	69.853	Xiphophorus_maculatus