EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000005487 (Gene tree)
Gene ID: 111844748
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 41132 bases
Position: chrPGUA01000138.1:875528-916659
Accession: 111844748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000020847	KH_1	PF00013.29	1.2e-51	1	3
ENSPKIP00000020847	KH_1	PF00013.29	1.2e-51	2	3
ENSPKIP00000020847	KH_1	PF00013.29	1.2e-51	3	3
ENSPKIP00000020847	KH_2	PF07650.17	6.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000001471	-	3953	-	ENSPKIP00000020847	448 (aa)	XP_023669270	UPI000CD65865

Gene Model

Click here to download ENSPKIG00000005487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000005487	-	77	57.061	ENSPKIG00000002205	PCBP2	99	52.761
ENSPKIG00000005487	-	53	66.845	ENSPKIG00000020913	-	80	66.845
ENSPKIG00000005487	-	73	59.517	ENSPKIG00000006570	PCBP2	97	59.517
ENSPKIG00000005487	-	50	40.000	ENSPKIG00000001428	NOVA1	50	40.000
ENSPKIG00000005487	-	77	33.333	ENSPKIG00000009065	-	53	34.146
ENSPKIG00000005487	-	52	45.455	ENSPKIG00000021705	hnrnpk	56	45.455
ENSPKIG00000005487	-	67	31.783	ENSPKIG00000009855	igf2bp2b	59	31.783
ENSPKIG00000005487	-	51	47.619	ENSPKIG00000010245	hnrpkl	55	47.619
ENSPKIG00000005487	-	100	80.440	ENSPKIG00000010244	pcbp4	100	81.099
ENSPKIG00000005487	-	73	60.661	ENSPKIG00000019329	pcbp3	97	58.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005487	-	96	59.122	ENSG00000090097	PCBP4	93	74.522	Homo_sapiens
ENSPKIG00000005487	-	100	75.328	ENSAPOG00000009897	-	100	75.328	Acanthochromis_polyacanthus
ENSPKIG00000005487	-	97	58.597	ENSAMEG00000009211	PCBP4	99	59.594	Ailuropoda_melanoleuca
ENSPKIG00000005487	-	88	71.496	ENSACIG00000015264	pcbp4	89	73.634	Amphilophus_citrinellus
ENSPKIG00000005487	-	90	75.362	ENSACIG00000020434	-	100	75.362	Amphilophus_citrinellus
ENSPKIG00000005487	-	94	63.824	ENSAOCG00000006924	-	100	64.858	Amphiprion_ocellaris
ENSPKIG00000005487	-	98	71.588	ENSAOCG00000021366	-	100	71.588	Amphiprion_ocellaris
ENSPKIG00000005487	-	88	55.227	ENSAPEG00000009555	-	79	69.712	Amphiprion_percula
ENSPKIG00000005487	-	89	73.333	ENSAPEG00000023157	pcbp4	100	74.820	Amphiprion_percula
ENSPKIG00000005487	-	98	71.840	ENSATEG00000006511	-	100	71.840	Anabas_testudineus
ENSPKIG00000005487	-	88	64.678	ENSATEG00000008529	pcbp4	99	64.172	Anabas_testudineus
ENSPKIG00000005487	-	97	60.407	ENSACAG00000011701	PCBP4	99	60.407	Anolis_carolinensis
ENSPKIG00000005487	-	96	59.122	ENSANAG00000023072	PCBP4	98	60.138	Aotus_nancymaae
ENSPKIG00000005487	-	100	68.127	ENSACLG00000013348	pcbp4	100	69.124	Astatotilapia_calliptera
ENSPKIG00000005487	-	100	74.236	ENSACLG00000025246	-	100	74.672	Astatotilapia_calliptera
ENSPKIG00000005487	-	100	78.925	ENSAMXG00000033125	pcbp4	100	78.925	Astyanax_mexicanus
ENSPKIG00000005487	-	97	58.597	ENSBTAG00000018622	PCBP4	99	59.594	Bos_taurus
ENSPKIG00000005487	-	96	59.353	ENSCJAG00000005783	PCBP4	98	60.369	Callithrix_jacchus
ENSPKIG00000005487	-	97	58.597	ENSCAFG00000010019	PCBP4	99	59.594	Canis_familiaris
ENSPKIG00000005487	-	97	58.597	ENSCAFG00020022361	PCBP4	99	59.594	Canis_lupus_dingo
ENSPKIG00000005487	-	97	58.597	ENSCHIG00000012918	PCBP4	99	59.594	Capra_hircus
ENSPKIG00000005487	-	97	58.824	ENSTSYG00000008765	PCBP4	99	59.819	Carlito_syrichta
ENSPKIG00000005487	-	97	58.597	ENSCAPG00000005895	PCBP4	99	59.594	Cavia_aperea
ENSPKIG00000005487	-	97	58.597	ENSCPOG00000014617	PCBP4	99	59.594	Cavia_porcellus
ENSPKIG00000005487	-	96	59.353	ENSCCAG00000033268	PCBP4	98	60.369	Cebus_capucinus
ENSPKIG00000005487	-	96	59.353	ENSCATG00000032034	PCBP4	98	60.369	Cercocebus_atys
ENSPKIG00000005487	-	97	58.597	ENSCLAG00000008356	PCBP4	99	59.594	Chinchilla_lanigera
ENSPKIG00000005487	-	96	59.353	ENSCSAG00000013913	PCBP4	98	60.369	Chlorocebus_sabaeus
ENSPKIG00000005487	-	97	59.864	ENSCPBG00000016554	PCBP4	97	59.864	Chrysemys_picta_bellii
ENSPKIG00000005487	-	96	59.353	ENSCANG00000038865	PCBP4	98	60.369	Colobus_angolensis_palliatus
ENSPKIG00000005487	-	97	58.824	ENSCGRG00001014953	Pcbp4	99	59.819	Cricetulus_griseus_chok1gshd
ENSPKIG00000005487	-	97	58.824	ENSCGRG00000008617	Pcbp4	99	59.819	Cricetulus_griseus_crigri
ENSPKIG00000005487	-	98	65.136	ENSCSEG00000014487	pcbp4	100	66.467	Cynoglossus_semilaevis
ENSPKIG00000005487	-	98	66.370	ENSCSEG00000021041	PCBP4	100	66.370	Cynoglossus_semilaevis
ENSPKIG00000005487	-	94	62.245	ENSCVAG00000003674	pcbp4	98	67.213	Cyprinodon_variegatus
ENSPKIG00000005487	-	100	74.017	ENSCVAG00000013090	-	100	74.017	Cyprinodon_variegatus
ENSPKIG00000005487	-	100	78.664	ENSDARG00000024276	pcbp4	100	80.090	Danio_rerio
ENSPKIG00000005487	-	94	69.048	ENSDNOG00000033951	PCBP4	90	69.048	Dasypus_novemcinctus
ENSPKIG00000005487	-	97	58.371	ENSDORG00000000573	Pcbp4	99	59.819	Dipodomys_ordii
ENSPKIG00000005487	-	64	55.987	ENSETEG00000001778	PCBP4	96	55.987	Echinops_telfairi
ENSPKIG00000005487	-	97	58.824	ENSEASG00005012889	PCBP4	99	59.819	Equus_asinus_asinus
ENSPKIG00000005487	-	97	58.824	ENSECAG00000024218	PCBP4	99	59.819	Equus_caballus
ENSPKIG00000005487	-	100	73.707	ENSELUG00000001870	-	100	73.707	Esox_lucius
ENSPKIG00000005487	-	100	73.941	ENSELUG00000018204	pcbp4	100	75.316	Esox_lucius
ENSPKIG00000005487	-	97	58.597	ENSFCAG00000009148	PCBP4	99	59.594	Felis_catus
ENSPKIG00000005487	-	94	57.783	ENSFALG00000008831	PCBP4	96	58.726	Ficedula_albicollis
ENSPKIG00000005487	-	97	58.371	ENSFDAG00000012692	PCBP4	99	59.368	Fukomys_damarensis
ENSPKIG00000005487	-	94	55.037	ENSFHEG00000002769	-	97	55.528	Fundulus_heteroclitus
ENSPKIG00000005487	-	98	73.556	ENSGMOG00000017799	-	100	73.556	Gadus_morhua
ENSPKIG00000005487	-	96	57.968	ENSGALG00000027695	PCBP4	97	58.851	Gallus_gallus
ENSPKIG00000005487	-	81	77.929	ENSGAFG00000021090	-	78	77.929	Gambusia_affinis
ENSPKIG00000005487	-	98	74.273	ENSGACG00000002664	-	100	74.720	Gasterosteus_aculeatus
ENSPKIG00000005487	-	97	59.729	ENSGAGG00000022116	PCBP4	97	59.729	Gopherus_agassizii
ENSPKIG00000005487	-	96	59.122	ENSGGOG00000012474	PCBP4	98	60.138	Gorilla_gorilla
ENSPKIG00000005487	-	100	74.891	ENSHBUG00000005329	-	100	74.891	Haplochromis_burtoni
ENSPKIG00000005487	-	100	68.327	ENSHBUG00000009472	pcbp4	100	69.323	Haplochromis_burtoni
ENSPKIG00000005487	-	97	58.824	ENSHGLG00000012018	PCBP4	99	59.819	Heterocephalus_glaber_female
ENSPKIG00000005487	-	97	57.079	ENSHGLG00100008748	PCBP4	99	58.072	Heterocephalus_glaber_male
ENSPKIG00000005487	-	100	70.614	ENSHCOG00000010838	-	100	71.053	Hippocampus_comes
ENSPKIG00000005487	-	100	79.085	ENSIPUG00000008212	pcbp4	100	79.303	Ictalurus_punctatus
ENSPKIG00000005487	-	97	57.014	ENSSTOG00000002573	PCBP4	99	58.014	Ictidomys_tridecemlineatus
ENSPKIG00000005487	-	97	58.824	ENSJJAG00000016235	Pcbp4	99	59.819	Jaculus_jaculus
ENSPKIG00000005487	-	98	71.092	ENSKMAG00000014252	pcbp4	96	72.187	Kryptolebias_marmoratus
ENSPKIG00000005487	-	100	73.144	ENSKMAG00000017554	-	100	73.581	Kryptolebias_marmoratus
ENSPKIG00000005487	-	100	74.017	ENSLBEG00000011345	-	100	74.454	Labrus_bergylta
ENSPKIG00000005487	-	100	65.188	ENSLACG00000015899	PCBP4	96	72.768	Latimeria_chalumnae
ENSPKIG00000005487	-	100	79.249	ENSLOCG00000013402	pcbp4	100	79.249	Lepisosteus_oculatus
ENSPKIG00000005487	-	94	57.035	ENSLAFG00000010732	PCBP4	100	58.145	Loxodonta_africana
ENSPKIG00000005487	-	96	59.353	ENSMFAG00000001431	PCBP4	98	60.369	Macaca_fascicularis
ENSPKIG00000005487	-	96	59.353	ENSMMUG00000022205	PCBP4	98	60.369	Macaca_mulatta
ENSPKIG00000005487	-	96	59.353	ENSMNEG00000028553	PCBP4	98	60.369	Macaca_nemestrina
ENSPKIG00000005487	-	96	59.353	ENSMLEG00000027083	PCBP4	98	60.369	Mandrillus_leucophaeus
ENSPKIG00000005487	-	98	70.378	ENSMAMG00000010163	pcbp4	100	69.600	Mastacembelus_armatus
ENSPKIG00000005487	-	100	75.109	ENSMAMG00000011364	-	100	75.109	Mastacembelus_armatus
ENSPKIG00000005487	-	100	68.127	ENSMZEG00005008852	pcbp4	100	69.323	Maylandia_zebra
ENSPKIG00000005487	-	100	74.236	ENSMZEG00005023631	-	100	74.672	Maylandia_zebra
ENSPKIG00000005487	-	56	71.212	ENSMGAG00000005091	-	89	71.212	Meleagris_gallopavo
ENSPKIG00000005487	-	64	53.333	ENSMGAG00000003895	-	99	53.333	Meleagris_gallopavo
ENSPKIG00000005487	-	97	58.824	ENSMAUG00000021064	Pcbp4	99	59.819	Mesocricetus_auratus
ENSPKIG00000005487	-	97	58.824	ENSMICG00000002686	PCBP4	99	59.819	Microcebus_murinus
ENSPKIG00000005487	-	97	58.784	ENSMOCG00000013557	Pcbp4	99	59.775	Microtus_ochrogaster
ENSPKIG00000005487	-	70	60.188	ENSMMOG00000017756	pcbp4	97	60.188	Mola_mola
ENSPKIG00000005487	-	98	70.694	ENSMMOG00000020533	-	100	71.141	Mola_mola
ENSPKIG00000005487	-	96	58.796	ENSMODG00000011790	PCBP4	82	59.028	Monodelphis_domestica
ENSPKIG00000005487	-	93	73.563	ENSMALG00000020318	pcbp4	92	74.253	Monopterus_albus
ENSPKIG00000005487	-	94	73.387	ENSMALG00000022117	-	100	73.387	Monopterus_albus
ENSPKIG00000005487	-	97	59.050	MGP_CAROLIEiJ_G0032623	Pcbp4	99	72.449	Mus_caroli
ENSPKIG00000005487	-	97	59.050	ENSMUSG00000023495	Pcbp4	99	73.469	Mus_musculus
ENSPKIG00000005487	-	97	58.824	MGP_PahariEiJ_G0015491	Pcbp4	99	71.939	Mus_pahari
ENSPKIG00000005487	-	97	59.050	MGP_SPRETEiJ_G0033768	-	99	72.449	Mus_spretus
ENSPKIG00000005487	-	97	58.597	ENSMPUG00000011766	PCBP4	99	59.594	Mustela_putorius_furo
ENSPKIG00000005487	-	97	58.824	ENSNGAG00000013148	Pcbp4	99	59.819	Nannospalax_galili
ENSPKIG00000005487	-	94	60.360	ENSNBRG00000007475	pcbp4	98	61.937	Neolamprologus_brichardi
ENSPKIG00000005487	-	98	70.917	ENSNBRG00000015885	-	100	71.365	Neolamprologus_brichardi
ENSPKIG00000005487	-	96	59.353	ENSNLEG00000007064	PCBP4	98	60.369	Nomascus_leucogenys
ENSPKIG00000005487	-	88	50.227	ENSMEUG00000006917	PCBP4	95	50.455	Notamacropus_eugenii
ENSPKIG00000005487	-	88	52.752	ENSOPRG00000008763	PCBP4	98	53.182	Ochotona_princeps
ENSPKIG00000005487	-	97	58.597	ENSODEG00000018230	PCBP4	99	59.594	Octodon_degus
ENSPKIG00000005487	-	97	56.849	ENSOANG00000014110	PCBP4	97	57.763	Ornithorhynchus_anatinus
ENSPKIG00000005487	-	97	59.276	ENSOCUG00000025336	PCBP4	99	60.045	Oryctolagus_cuniculus
ENSPKIG00000005487	-	98	68.697	ENSORLG00000003061	pcbp4	96	69.874	Oryzias_latipes
ENSPKIG00000005487	-	98	70.419	ENSORLG00000009899	-	100	70.419	Oryzias_latipes
ENSPKIG00000005487	-	100	74.017	ENSORLG00020001183	-	100	74.017	Oryzias_latipes_hni
ENSPKIG00000005487	-	100	74.017	ENSORLG00015017819	-	100	74.017	Oryzias_latipes_hsok
ENSPKIG00000005487	-	98	67.909	ENSORLG00015019262	pcbp4	97	69.151	Oryzias_latipes_hsok
ENSPKIG00000005487	-	98	67.091	ENSOMEG00000003516	-	96	68.365	Oryzias_melastigma
ENSPKIG00000005487	-	100	74.017	ENSOMEG00000011545	-	100	74.017	Oryzias_melastigma
ENSPKIG00000005487	-	97	58.597	ENSOGAG00000032384	PCBP4	99	59.594	Otolemur_garnettii
ENSPKIG00000005487	-	90	57.882	ENSOARG00000006603	PCBP4	100	58.968	Ovis_aries
ENSPKIG00000005487	-	96	59.122	ENSPPAG00000038764	PCBP4	98	60.460	Pan_paniscus
ENSPKIG00000005487	-	97	58.597	ENSPPRG00000006165	PCBP4	99	59.594	Panthera_pardus
ENSPKIG00000005487	-	96	59.122	ENSPTIG00000005401	PCBP4	93	60.138	Panthera_tigris_altaica
ENSPKIG00000005487	-	96	59.122	ENSPTRG00000014983	PCBP4	98	60.138	Pan_troglodytes
ENSPKIG00000005487	-	96	59.353	ENSPANG00000026222	PCBP4	98	60.369	Papio_anubis
ENSPKIG00000005487	-	82	55.585	ENSPSIG00000011286	PCBP4	99	55.585	Pelodiscus_sinensis
ENSPKIG00000005487	-	90	70.644	ENSPMGG00000000063	pcbp4	99	71.122	Periophthalmus_magnuspinnatus
ENSPKIG00000005487	-	98	68.386	ENSPMGG00000022732	-	100	68.386	Periophthalmus_magnuspinnatus
ENSPKIG00000005487	-	97	58.824	ENSPEMG00000009276	Pcbp4	99	59.819	Peromyscus_maniculatus_bairdii
ENSPKIG00000005487	-	96	59.353	ENSPCIG00000018151	PCBP4	94	59.584	Phascolarctos_cinereus
ENSPKIG00000005487	-	100	73.799	ENSPFOG00000002989	-	100	74.236	Poecilia_formosa
ENSPKIG00000005487	-	95	68.233	ENSPFOG00000014474	pcbp4	96	75.397	Poecilia_formosa
ENSPKIG00000005487	-	78	68.156	ENSPLAG00000011438	-	98	69.274	Poecilia_latipinna
ENSPKIG00000005487	-	80	65.116	ENSPLAG00000023316	pcbp4	90	67.442	Poecilia_latipinna
ENSPKIG00000005487	-	79	59.044	ENSPMEG00000012990	pcbp4	100	62.116	Poecilia_mexicana
ENSPKIG00000005487	-	70	46.918	ENSPREG00000021498	-	81	46.918	Poecilia_reticulata
ENSPKIG00000005487	-	98	68.009	ENSPREG00000017370	-	100	68.456	Poecilia_reticulata
ENSPKIG00000005487	-	96	59.353	ENSPPYG00000013822	PCBP4	98	60.369	Pongo_abelii
ENSPKIG00000005487	-	88	52.914	ENSPCAG00000009515	PCBP4	97	53.953	Procavia_capensis
ENSPKIG00000005487	-	97	58.824	ENSPCOG00000027535	PCBP4	99	59.819	Propithecus_coquereli
ENSPKIG00000005487	-	88	51.002	ENSPVAG00000012474	PCBP4	98	51.435	Pteropus_vampyrus
ENSPKIG00000005487	-	98	71.365	ENSPNYG00000003098	-	100	71.365	Pundamilia_nyererei
ENSPKIG00000005487	-	92	68.623	ENSPNYG00000019234	pcbp4	100	70.203	Pundamilia_nyererei
ENSPKIG00000005487	-	100	79.310	ENSPNAG00000025434	pcbp4	100	79.526	Pygocentrus_nattereri
ENSPKIG00000005487	-	97	58.824	ENSRNOG00000012406	Pcbp4	99	59.819	Rattus_norvegicus
ENSPKIG00000005487	-	96	59.353	ENSRBIG00000043793	PCBP4	98	60.369	Rhinopithecus_bieti
ENSPKIG00000005487	-	96	59.353	ENSRROG00000034589	PCBP4	98	60.369	Rhinopithecus_roxellana
ENSPKIG00000005487	-	96	59.353	ENSSBOG00000027029	PCBP4	98	60.369	Saimiri_boliviensis_boliviensis
ENSPKIG00000005487	-	70	59.302	ENSSHAG00000007362	PCBP4	100	59.302	Sarcophilus_harrisii
ENSPKIG00000005487	-	100	89.135	ENSSFOG00015012075	PCBP4	100	89.135	Scleropages_formosus
ENSPKIG00000005487	-	69	78.526	ENSSFOG00015008221	pcbp4	61	78.526	Scleropages_formosus
ENSPKIG00000005487	-	100	72.113	ENSSMAG00000009392	-	99	72.609	Scophthalmus_maximus
ENSPKIG00000005487	-	98	69.767	ENSSMAG00000005827	pcbp4	95	71.789	Scophthalmus_maximus
ENSPKIG00000005487	-	98	71.365	ENSSDUG00000015540	-	100	71.365	Seriola_dumerili
ENSPKIG00000005487	-	89	72.464	ENSSDUG00000017719	pcbp4	97	73.671	Seriola_dumerili
ENSPKIG00000005487	-	98	71.365	ENSSLDG00000007851	-	100	71.365	Seriola_lalandi_dorsalis
ENSPKIG00000005487	-	97	55.125	ENSSPUG00000000194	PCBP4	99	55.125	Sphenodon_punctatus
ENSPKIG00000005487	-	80	62.078	ENSSPAG00000019058	-	92	63.089	Stegastes_partitus
ENSPKIG00000005487	-	100	74.236	ENSSPAG00000003033	-	100	74.672	Stegastes_partitus
ENSPKIG00000005487	-	97	58.597	ENSSSCG00000028446	PCBP4	99	59.594	Sus_scrofa
ENSPKIG00000005487	-	72	55.352	ENSTGUG00000006393	PCBP4	97	56.269	Taeniopygia_guttata
ENSPKIG00000005487	-	98	70.917	ENSTRUG00000007426	-	100	70.917	Takifugu_rubripes
ENSPKIG00000005487	-	98	71.818	ENSTNIG00000017887	-	100	71.818	Tetraodon_nigroviridis
ENSPKIG00000005487	-	79	40.351	ENSTBEG00000015770	PCBP4	100	41.500	Tupaia_belangeri
ENSPKIG00000005487	-	69	56.216	ENSTTRG00000001443	PCBP4	83	58.602	Tursiops_truncatus
ENSPKIG00000005487	-	97	50.564	ENSUAMG00000020871	PCBP4	100	57.493	Ursus_americanus
ENSPKIG00000005487	-	88	59.801	ENSUMAG00000021609	PCBP4	91	60.000	Ursus_maritimus
ENSPKIG00000005487	-	97	58.597	ENSVVUG00000026857	PCBP4	99	59.594	Vulpes_vulpes
ENSPKIG00000005487	-	98	64.247	ENSXCOG00000000111	-	100	70.690	Xiphophorus_couchianus
ENSPKIG00000005487	-	100	73.581	ENSXMAG00000024530	-	100	74.017	Xiphophorus_maculatus
ENSPKIG00000005487	-	84	64.444	ENSXMAG00000022188	-	90	66.667	Xiphophorus_maculatus
ENSPKIG00000005487	-	79	76.944	ENSXMAG00000015709	pcbp4	77	76.630	Xiphophorus_maculatus