EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000005578 (Gene tree)
Gene ID: 111835245
Gene Symbol: chd6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 27729 bases
Position: chrPGUA01000052.1:2526663-2554391
Accession: ZDB-GENE-130530-559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000021064	ResIII	PF04851.15	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000001690	-	8064	-	ENSPKIP00000021064	2687 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000005578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000005578	chd6	71	64.986	ENSPKIG00000025401	-	71	63.216
ENSPKIG00000005578	chd6	51	59.712	ENSPKIG00000009142	chd8	55	59.712
ENSPKIG00000005578	chd6	72	66.713	ENSPKIG00000009637	chd7	68	66.643
ENSPKIG00000005578	chd6	72	64.954	ENSPKIG00000021876	chd9	75	64.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005578	chd6	79	72.518	ENSG00000124177	CHD6	99	83.721	Homo_sapiens
ENSPKIG00000005578	chd6	85	74.142	ENSAPOG00000013736	chd6	75	72.625	Acanthochromis_polyacanthus
ENSPKIG00000005578	chd6	79	73.019	ENSAMEG00000009496	CHD6	77	76.800	Ailuropoda_melanoleuca
ENSPKIG00000005578	chd6	85	73.222	ENSATEG00000005608	chd6	74	72.953	Anabas_testudineus
ENSPKIG00000005578	chd6	75	77.139	ENSAPLG00000015592	CHD6	76	78.382	Anas_platyrhynchos
ENSPKIG00000005578	chd6	74	74.000	ENSACAG00000006842	CHD6	73	76.272	Anolis_carolinensis
ENSPKIG00000005578	chd6	79	72.479	ENSANAG00000037548	CHD6	94	86.990	Aotus_nancymaae
ENSPKIG00000005578	chd6	96	62.856	ENSAMXG00000009576	chd6	90	70.158	Astyanax_mexicanus
ENSPKIG00000005578	chd6	82	70.711	ENSBTAG00000005733	CHD6	75	78.371	Bos_taurus
ENSPKIG00000005578	chd6	79	72.744	ENSCJAG00000017920	CHD6	94	86.990	Callithrix_jacchus
ENSPKIG00000005578	chd6	79	72.898	ENSCAFG00000009236	CHD6	76	76.800	Canis_familiaris
ENSPKIG00000005578	chd6	79	72.848	ENSCAFG00020012906	CHD6	94	86.745	Canis_lupus_dingo
ENSPKIG00000005578	chd6	77	76.121	ENSCHIG00000017606	CHD6	76	77.068	Capra_hircus
ENSPKIG00000005578	chd6	65	80.313	ENSTSYG00000014635	CHD6	78	81.339	Carlito_syrichta
ENSPKIG00000005578	chd6	78	73.178	ENSCPOG00000015641	CHD6	77	76.197	Cavia_porcellus
ENSPKIG00000005578	chd6	79	73.122	ENSCCAG00000036828	CHD6	94	86.990	Cebus_capucinus
ENSPKIG00000005578	chd6	79	72.361	ENSCATG00000039248	CHD6	94	86.990	Cercocebus_atys
ENSPKIG00000005578	chd6	79	72.881	ENSCLAG00000013743	CHD6	77	76.463	Chinchilla_lanigera
ENSPKIG00000005578	chd6	79	72.424	ENSCSAG00000013997	CHD6	77	75.855	Chlorocebus_sabaeus
ENSPKIG00000005578	chd6	59	80.357	ENSCHOG00000012647	CHD6	63	77.563	Choloepus_hoffmanni
ENSPKIG00000005578	chd6	72	81.890	ENSCPBG00000019382	CHD6	76	79.081	Chrysemys_picta_bellii
ENSPKIG00000005578	chd6	79	72.788	ENSCANG00000043435	CHD6	94	86.990	Colobus_angolensis_palliatus
ENSPKIG00000005578	chd6	79	72.408	ENSCGRG00001002694	Chd6	76	75.979	Cricetulus_griseus_chok1gshd
ENSPKIG00000005578	chd6	99	64.389	ENSDARG00000017244	chd6	92	74.613	Danio_rerio
ENSPKIG00000005578	chd6	79	72.793	ENSDNOG00000004176	CHD6	77	76.794	Dasypus_novemcinctus
ENSPKIG00000005578	chd6	79	73.350	ENSEASG00005023433	CHD6	94	88.109	Equus_asinus_asinus
ENSPKIG00000005578	chd6	79	72.777	ENSECAG00000011761	CHD6	77	76.640	Equus_caballus
ENSPKIG00000005578	chd6	74	82.944	ENSELUG00000012309	chd6	94	82.661	Esox_lucius
ENSPKIG00000005578	chd6	79	72.898	ENSFCAG00000003572	CHD6	77	76.867	Felis_catus
ENSPKIG00000005578	chd6	77	76.662	ENSFALG00000012563	CHD6	76	78.050	Ficedula_albicollis
ENSPKIG00000005578	chd6	79	72.639	ENSFDAG00000013791	CHD6	77	76.774	Fukomys_damarensis
ENSPKIG00000005578	chd6	73	75.746	ENSGMOG00000011715	chd6	87	75.092	Gadus_morhua
ENSPKIG00000005578	chd6	77	74.764	ENSGACG00000000037	chd6	84	75.175	Gasterosteus_aculeatus
ENSPKIG00000005578	chd6	79	72.518	ENSGGOG00000013123	CHD6	94	86.990	Gorilla_gorilla
ENSPKIG00000005578	chd6	87	72.480	ENSHBUG00000014701	chd6	75	72.388	Haplochromis_burtoni
ENSPKIG00000005578	chd6	79	72.958	ENSHGLG00000004548	CHD6	76	76.841	Heterocephalus_glaber_female
ENSPKIG00000005578	chd6	79	72.958	ENSHGLG00100006401	CHD6	76	76.841	Heterocephalus_glaber_male
ENSPKIG00000005578	chd6	96	62.903	ENSIPUG00000003692	chd6	91	73.125	Ictalurus_punctatus
ENSPKIG00000005578	chd6	78	73.259	ENSSTOG00000013382	CHD6	77	76.225	Ictidomys_tridecemlineatus
ENSPKIG00000005578	chd6	72	80.042	ENSLACG00000010881	CHD6	75	77.688	Latimeria_chalumnae
ENSPKIG00000005578	chd6	73	86.025	ENSLOCG00000007386	chd6	84	79.856	Lepisosteus_oculatus
ENSPKIG00000005578	chd6	79	72.777	ENSLAFG00000012144	CHD6	76	76.908	Loxodonta_africana
ENSPKIG00000005578	chd6	79	72.605	ENSMFAG00000032830	CHD6	94	86.990	Macaca_fascicularis
ENSPKIG00000005578	chd6	79	72.424	ENSMMUG00000020458	CHD6	94	86.990	Macaca_mulatta
ENSPKIG00000005578	chd6	79	72.605	ENSMNEG00000040847	CHD6	94	86.990	Macaca_nemestrina
ENSPKIG00000005578	chd6	79	72.605	ENSMLEG00000031965	CHD6	94	86.990	Mandrillus_leucophaeus
ENSPKIG00000005578	chd6	83	74.528	ENSMAMG00000013111	chd6	73	73.861	Mastacembelus_armatus
ENSPKIG00000005578	chd6	74	77.646	ENSMGAG00000001121	CHD6	78	75.962	Meleagris_gallopavo
ENSPKIG00000005578	chd6	79	72.497	ENSMICG00000016641	CHD6	94	86.990	Microcebus_murinus
ENSPKIG00000005578	chd6	71	82.045	ENSMODG00000000720	-	78	82.936	Monodelphis_domestica
ENSPKIG00000005578	chd6	79	72.529	MGP_CAROLIEiJ_G0024604	Chd6	89	80.569	Mus_caroli
ENSPKIG00000005578	chd6	79	72.589	ENSMUSG00000057133	Chd6	89	80.664	Mus_musculus
ENSPKIG00000005578	chd6	80	72.380	MGP_PahariEiJ_G0026048	Chd6	89	80.474	Mus_pahari
ENSPKIG00000005578	chd6	79	72.589	MGP_SPRETEiJ_G0025526	Chd6	89	80.664	Mus_spretus
ENSPKIG00000005578	chd6	79	73.091	ENSMPUG00000017695	CHD6	76	77.154	Mustela_putorius_furo
ENSPKIG00000005578	chd6	82	70.231	ENSMLUG00000016247	CHD6	76	76.467	Myotis_lucifugus
ENSPKIG00000005578	chd6	79	72.032	ENSNLEG00000006496	CHD6	77	75.116	Nomascus_leucogenys
ENSPKIG00000005578	chd6	78	70.956	ENSOPRG00000013376	-	77	73.988	Ochotona_princeps
ENSPKIG00000005578	chd6	75	80.888	ENSONIG00000000393	chd6	76	84.610	Oreochromis_niloticus
ENSPKIG00000005578	chd6	81	71.688	ENSOANG00000014347	CHD6	72	76.280	Ornithorhynchus_anatinus
ENSPKIG00000005578	chd6	79	72.777	ENSOCUG00000012394	CHD6	76	76.330	Oryctolagus_cuniculus
ENSPKIG00000005578	chd6	84	73.094	ENSORLG00020021891	chd6	95	88.600	Oryzias_latipes_hni
ENSPKIG00000005578	chd6	79	72.843	ENSOGAG00000002427	CHD6	77	76.197	Otolemur_garnettii
ENSPKIG00000005578	chd6	83	68.718	ENSOARG00000002597	CHD6	76	75.469	Ovis_aries
ENSPKIG00000005578	chd6	79	72.958	ENSPPRG00000014756	CHD6	77	76.933	Panthera_pardus
ENSPKIG00000005578	chd6	79	72.716	ENSPTIG00000011094	CHD6	77	76.667	Panthera_tigris_altaica
ENSPKIG00000005578	chd6	79	72.666	ENSPTRG00000013504	CHD6	94	86.990	Pan_troglodytes
ENSPKIG00000005578	chd6	79	72.666	ENSPANG00000025554	CHD6	94	86.990	Papio_anubis
ENSPKIG00000005578	chd6	76	80.014	ENSPMGG00000014877	chd6	86	79.459	Periophthalmus_magnuspinnatus
ENSPKIG00000005578	chd6	80	73.329	ENSPCIG00000028037	CHD6	81	73.778	Phascolarctos_cinereus
ENSPKIG00000005578	chd6	82	75.543	ENSPLAG00000003128	chd6	76	73.751	Poecilia_latipinna
ENSPKIG00000005578	chd6	83	75.356	ENSPREG00000022653	chd6	99	89.194	Poecilia_reticulata
ENSPKIG00000005578	chd6	79	72.458	ENSPPYG00000011016	CHD6	78	75.855	Pongo_abelii
ENSPKIG00000005578	chd6	79	72.716	ENSPCOG00000001089	CHD6	94	86.796	Propithecus_coquereli
ENSPKIG00000005578	chd6	89	65.380	ENSPNYG00000022516	chd6	89	65.328	Pundamilia_nyererei
ENSPKIG00000005578	chd6	71	76.744	ENSPNAG00000012825	chd6	99	63.361	Pygocentrus_nattereri
ENSPKIG00000005578	chd6	79	72.104	ENSRNOG00000016744	Chd6	79	75.816	Rattus_norvegicus
ENSPKIG00000005578	chd6	79	72.861	ENSSBOG00000022089	CHD6	94	86.990	Saimiri_boliviensis_boliviensis
ENSPKIG00000005578	chd6	80	72.970	ENSSHAG00000017072	CHD6	81	73.620	Sarcophilus_harrisii
ENSPKIG00000005578	chd6	96	75.619	ENSSFOG00015012920	chd6	99	75.862	Scleropages_formosus
ENSPKIG00000005578	chd6	80	72.777	ENSSSCG00000007360	CHD6	76	77.282	Sus_scrofa
ENSPKIG00000005578	chd6	78	80.337	ENSTGUG00000003179	CHD6	79	78.908	Taeniopygia_guttata
ENSPKIG00000005578	chd6	84	75.696	ENSTNIG00000017487	chd6	90	75.588	Tetraodon_nigroviridis
ENSPKIG00000005578	chd6	78	73.643	ENSTTRG00000013438	CHD6	73	78.756	Tursiops_truncatus
ENSPKIG00000005578	chd6	79	71.820	ENSUAMG00000024036	CHD6	94	86.745	Ursus_americanus
ENSPKIG00000005578	chd6	79	73.199	ENSUMAG00000002017	CHD6	94	86.745	Ursus_maritimus
ENSPKIG00000005578	chd6	76	68.163	ENSVPAG00000007941	CHD6	69	82.292	Vicugna_pacos
ENSPKIG00000005578	chd6	79	72.898	ENSVVUG00000029164	CHD6	76	76.800	Vulpes_vulpes
ENSPKIG00000005578	chd6	72	72.098	ENSXETG00000021445	chd6	76	69.199	Xenopus_tropicalis