EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000005593 (Gene tree)
Gene ID: 111848220
Gene Symbol: ern1
Alias: -
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 22555 bases
Position: chrPGUA01000101.1:33537-56091
Accession: 111848220
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000021112	Ribonuc_2-5A	PF06479.12	2.3e-40	1	1
ENSPKIP00000021158	Ribonuc_2-5A	PF06479.12	2.3e-40	1	1
ENSPKIP00000021093	Ribonuc_2-5A	PF06479.12	2.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000001719	-	2982	-	ENSPKIP00000021093	993 (aa)	-	-
ENSPKIT00000001787	-	3452	-	ENSPKIP00000021158	981 (aa)	XP_023675836	UPI000CD6139E
ENSPKIT00000001741	-	3556	-	ENSPKIP00000021112	981 (aa)	XP_023675836	UPI000CD6139E

Gene Model

Click here to download ENSPKIG00000005593's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki04140	Autophagy - animal	KEGG
pki04141	Protein processing in endoplasmic reticulum	KEGG
pki04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005593's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000005593	ern1	95	58.253	ENSPKIG00000013181	ern2	96	57.724

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005593	ern1	98	81.603	ENSAPOG00000009999	ern1	90	81.603	Acanthochromis_polyacanthus
ENSPKIG00000005593	ern1	98	81.520	ENSACIG00000021716	ern1	89	81.520	Amphilophus_citrinellus
ENSPKIG00000005593	ern1	98	82.389	ENSAOCG00000012309	ern1	90	82.051	Amphiprion_ocellaris
ENSPKIG00000005593	ern1	98	81.949	ENSAPEG00000011263	ern1	98	83.746	Amphiprion_percula
ENSPKIG00000005593	ern1	98	82.268	ENSATEG00000024468	ern1	89	82.268	Anabas_testudineus
ENSPKIG00000005593	ern1	98	82.389	ENSACLG00000027919	ern1	89	82.389	Astatotilapia_calliptera
ENSPKIG00000005593	ern1	99	80.553	ENSAMXG00000000944	ern1	94	80.553	Astyanax_mexicanus
ENSPKIG00000005593	ern1	97	82.017	ENSCSEG00000014500	ern1	93	82.310	Cynoglossus_semilaevis
ENSPKIG00000005593	ern1	96	84.127	ENSCVAG00000002988	ern1	91	83.525	Cyprinodon_variegatus
ENSPKIG00000005593	ern1	98	80.229	ENSDARG00000013997	ern1	100	80.229	Danio_rerio
ENSPKIG00000005593	ern1	97	78.041	ENSELUG00000005957	ern1	93	78.041	Esox_lucius
ENSPKIG00000005593	ern1	96	83.704	ENSFHEG00000005578	ern1	90	83.107	Fundulus_heteroclitus
ENSPKIG00000005593	ern1	95	82.040	ENSGMOG00000011232	ern1	99	82.040	Gadus_morhua
ENSPKIG00000005593	ern1	99	80.972	ENSGAFG00000020231	ern1	93	81.624	Gambusia_affinis
ENSPKIG00000005593	ern1	95	83.280	ENSGACG00000011700	ern1	97	83.280	Gasterosteus_aculeatus
ENSPKIG00000005593	ern1	98	82.286	ENSHBUG00000012581	ern1	89	82.703	Haplochromis_burtoni
ENSPKIG00000005593	ern1	97	80.789	ENSHCOG00000016199	ern1	91	81.415	Hippocampus_comes
ENSPKIG00000005593	ern1	99	81.565	ENSIPUG00000011083	ern1	94	81.565	Ictalurus_punctatus
ENSPKIG00000005593	ern1	98	81.884	ENSKMAG00000019499	ern1	90	81.884	Kryptolebias_marmoratus
ENSPKIG00000005593	ern1	97	78.822	ENSLBEG00000025907	ern1	89	78.822	Labrus_bergylta
ENSPKIG00000005593	ern1	96	83.053	ENSMAMG00000023439	ern1	89	83.053	Mastacembelus_armatus
ENSPKIG00000005593	ern1	98	82.341	ENSMZEG00005003221	ern1	89	82.341	Maylandia_zebra
ENSPKIG00000005593	ern1	99	80.938	ENSMMOG00000007650	ern1	98	80.629	Mola_mola
ENSPKIG00000005593	ern1	98	81.250	ENSMALG00000017775	ern1	89	81.333	Monopterus_albus
ENSPKIG00000005593	ern1	98	82.286	ENSNBRG00000002179	ern1	90	82.286	Neolamprologus_brichardi
ENSPKIG00000005593	ern1	95	82.839	ENSONIG00000017169	ern1	97	82.839	Oreochromis_niloticus
ENSPKIG00000005593	ern1	97	81.628	ENSORLG00000008940	ern1	89	81.628	Oryzias_latipes
ENSPKIG00000005593	ern1	97	81.524	ENSORLG00020018387	ern1	89	81.524	Oryzias_latipes_hni
ENSPKIG00000005593	ern1	97	81.400	ENSORLG00015007946	ern1	89	81.400	Oryzias_latipes_hsok
ENSPKIG00000005593	ern1	96	82.180	ENSOMEG00000011741	ern1	88	82.180	Oryzias_melastigma
ENSPKIG00000005593	ern1	98	80.809	ENSPMGG00000020442	ern1	93	80.809	Periophthalmus_magnuspinnatus
ENSPKIG00000005593	ern1	97	83.281	ENSPFOG00000007378	ern1	90	83.281	Poecilia_formosa
ENSPKIG00000005593	ern1	97	83.281	ENSPLAG00000014780	ern1	90	83.281	Poecilia_latipinna
ENSPKIG00000005593	ern1	97	83.386	ENSPMEG00000016324	ern1	90	83.514	Poecilia_mexicana
ENSPKIG00000005593	ern1	97	83.386	ENSPREG00000006286	ern1	90	83.386	Poecilia_reticulata
ENSPKIG00000005593	ern1	99	81.837	ENSPNYG00000017929	ern1	94	81.837	Pundamilia_nyererei
ENSPKIG00000005593	ern1	99	82.165	ENSPNAG00000029447	ern1	94	82.371	Pygocentrus_nattereri
ENSPKIG00000005593	ern1	98	81.231	ENSSMAG00000015042	ern1	89	81.314	Scophthalmus_maximus
ENSPKIG00000005593	ern1	99	82.150	ENSSDUG00000009098	ern1	90	82.150	Seriola_dumerili
ENSPKIG00000005593	ern1	98	82.752	ENSSLDG00000023254	ern1	88	82.752	Seriola_lalandi_dorsalis
ENSPKIG00000005593	ern1	98	81.856	ENSSPAG00000017539	ern1	90	81.856	Stegastes_partitus
ENSPKIG00000005593	ern1	96	81.067	ENSTRUG00000001041	ern1	92	81.191	Takifugu_rubripes
ENSPKIG00000005593	ern1	95	83.440	ENSTNIG00000017990	ern1	98	83.227	Tetraodon_nigroviridis
ENSPKIG00000005593	ern1	97	83.246	ENSXCOG00000010330	ern1	94	83.246	Xiphophorus_couchianus
ENSPKIG00000005593	ern1	97	83.177	ENSXMAG00000001310	ern1	90	83.177	Xiphophorus_maculatus