EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000005627 (Gene tree)
Gene ID: 111835958
Gene Symbol: prpf6
Alias: -
Full Name: PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 11255 bases
Position: chrPGUA01000055.1:2125729-2136983
Accession: ZDB-GENE-030131-2575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000021172	PRP1_N	PF06424.12	1.6e-57	1	1
ENSPKIP00000021119	PRP1_N	PF06424.12	1.8e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000001801	-	2862	-	ENSPKIP00000021172	953 (aa)	-	-
ENSPKIT00000001748	-	4408	-	ENSPKIP00000021119	1031 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000005627's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005627's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005627	prpf6	99	93.730	ENSG00000101161	PRPF6	100	93.305	Homo_sapiens
ENSPKIG00000005627	prpf6	99	94.787	ENSAPOG00000010395	prpf6	98	93.555	Acanthochromis_polyacanthus
ENSPKIG00000005627	prpf6	99	93.023	ENSAMEG00000001916	PRPF6	99	92.600	Ailuropoda_melanoleuca
ENSPKIG00000005627	prpf6	99	94.894	ENSACIG00000019862	prpf6	98	93.659	Amphilophus_citrinellus
ENSPKIG00000005627	prpf6	99	94.894	ENSAOCG00000012988	prpf6	98	93.659	Amphiprion_ocellaris
ENSPKIG00000005627	prpf6	99	88.191	ENSAPEG00000008301	prpf6	100	88.830	Amphiprion_percula
ENSPKIG00000005627	prpf6	99	94.894	ENSATEG00000005581	prpf6	98	93.659	Anabas_testudineus
ENSPKIG00000005627	prpf6	99	94.080	ENSACAG00000006464	PRPF6	96	93.179	Anolis_carolinensis
ENSPKIG00000005627	prpf6	99	93.730	ENSANAG00000012661	PRPF6	100	94.229	Aotus_nancymaae
ENSPKIG00000005627	prpf6	99	94.787	ENSACLG00000025875	prpf6	98	93.555	Astatotilapia_calliptera
ENSPKIG00000005627	prpf6	99	94.620	ENSAMXG00000001929	prpf6	97	95.042	Astyanax_mexicanus
ENSPKIG00000005627	prpf6	99	94.155	ENSBTAG00000011656	PRPF6	100	93.730	Bos_taurus
ENSPKIG00000005627	prpf6	99	93.730	ENSCJAG00000010616	PRPF6	100	93.305	Callithrix_jacchus
ENSPKIG00000005627	prpf6	99	94.261	ENSCAFG00000013165	PRPF6	100	93.836	Canis_familiaris
ENSPKIG00000005627	prpf6	99	94.261	ENSCAFG00020002050	PRPF6	100	93.836	Canis_lupus_dingo
ENSPKIG00000005627	prpf6	99	94.155	ENSCHIG00000018187	PRPF6	100	93.730	Capra_hircus
ENSPKIG00000005627	prpf6	99	94.155	ENSTSYG00000007814	PRPF6	100	93.730	Carlito_syrichta
ENSPKIG00000005627	prpf6	96	93.457	ENSCAPG00000015077	PRPF6	100	92.585	Cavia_aperea
ENSPKIG00000005627	prpf6	99	94.793	ENSCPOG00000007518	PRPF6	100	94.368	Cavia_porcellus
ENSPKIG00000005627	prpf6	99	90.648	ENSCCAG00000024564	PRPF6	100	90.223	Cebus_capucinus
ENSPKIG00000005627	prpf6	99	93.730	ENSCATG00000037473	PRPF6	100	93.305	Cercocebus_atys
ENSPKIG00000005627	prpf6	99	91.286	ENSCLAG00000003854	PRPF6	100	90.861	Chinchilla_lanigera
ENSPKIG00000005627	prpf6	99	89.018	ENSCSAG00000016742	PRPF6	100	88.596	Chlorocebus_sabaeus
ENSPKIG00000005627	prpf6	84	78.374	ENSCHOG00000003315	-	98	78.017	Choloepus_hoffmanni
ENSPKIG00000005627	prpf6	99	93.933	ENSCPBG00000013964	PRPF6	98	93.933	Chrysemys_picta_bellii
ENSPKIG00000005627	prpf6	98	73.256	ENSCING00000008817	-	99	73.256	Ciona_intestinalis
ENSPKIG00000005627	prpf6	99	93.624	ENSCANG00000038230	PRPF6	100	93.199	Colobus_angolensis_palliatus
ENSPKIG00000005627	prpf6	99	94.793	ENSCGRG00001022666	Prpf6	100	94.368	Cricetulus_griseus_chok1gshd
ENSPKIG00000005627	prpf6	99	88.936	ENSCSEG00000018561	prpf6	100	89.362	Cynoglossus_semilaevis
ENSPKIG00000005627	prpf6	99	94.149	ENSCVAG00000010550	prpf6	100	91.046	Cyprinodon_variegatus
ENSPKIG00000005627	prpf6	99	94.192	ENSDARG00000091367	prpf6	99	94.615	Danio_rerio
ENSPKIG00000005627	prpf6	99	94.368	ENSDNOG00000040544	PRPF6	100	94.368	Dasypus_novemcinctus
ENSPKIG00000005627	prpf6	90	94.276	ENSDORG00000005406	Prpf6	100	94.276	Dipodomys_ordii
ENSPKIG00000005627	prpf6	98	71.016	FBgn0036828	CG6841	98	71.016	Drosophila_melanogaster
ENSPKIG00000005627	prpf6	84	92.251	ENSETEG00000004447	PRPF6	85	92.251	Echinops_telfairi
ENSPKIG00000005627	prpf6	99	87.275	ENSEBUG00000008835	prpf6	99	87.063	Eptatretus_burgeri
ENSPKIG00000005627	prpf6	99	94.580	ENSEASG00005023115	PRPF6	100	94.155	Equus_asinus_asinus
ENSPKIG00000005627	prpf6	99	90.329	ENSECAG00000013983	PRPF6	100	89.904	Equus_caballus
ENSPKIG00000005627	prpf6	89	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSPKIG00000005627	prpf6	99	94.043	ENSELUG00000001945	prpf6	96	91.675	Esox_lucius
ENSPKIG00000005627	prpf6	99	94.261	ENSFCAG00000001183	PRPF6	100	93.836	Felis_catus
ENSPKIG00000005627	prpf6	99	87.288	ENSFALG00000006046	-	97	87.288	Ficedula_albicollis
ENSPKIG00000005627	prpf6	99	93.895	ENSFALG00000010326	-	98	93.895	Ficedula_albicollis
ENSPKIG00000005627	prpf6	99	93.411	ENSFDAG00000006451	PRPF6	100	94.104	Fukomys_damarensis
ENSPKIG00000005627	prpf6	99	95.106	ENSFHEG00000000560	prpf6	98	94.142	Fundulus_heteroclitus
ENSPKIG00000005627	prpf6	99	92.660	ENSGMOG00000015622	prpf6	99	92.660	Gadus_morhua
ENSPKIG00000005627	prpf6	99	94.368	ENSGALG00000006001	PRPF6	100	94.368	Gallus_gallus
ENSPKIG00000005627	prpf6	99	89.787	ENSGAFG00000021109	prpf6	100	86.781	Gambusia_affinis
ENSPKIG00000005627	prpf6	99	93.723	ENSGACG00000002576	prpf6	99	93.723	Gasterosteus_aculeatus
ENSPKIG00000005627	prpf6	99	93.828	ENSGAGG00000008653	PRPF6	98	93.828	Gopherus_agassizii
ENSPKIG00000005627	prpf6	99	93.730	ENSGGOG00000016876	PRPF6	100	93.305	Gorilla_gorilla
ENSPKIG00000005627	prpf6	99	94.787	ENSHBUG00000004496	prpf6	98	93.555	Haplochromis_burtoni
ENSPKIG00000005627	prpf6	99	94.687	ENSHGLG00000009222	PRPF6	100	94.261	Heterocephalus_glaber_female
ENSPKIG00000005627	prpf6	96	94.656	ENSHGLG00100016600	PRPF6	100	94.220	Heterocephalus_glaber_male
ENSPKIG00000005627	prpf6	99	93.723	ENSHCOG00000011513	prpf6	98	92.716	Hippocampus_comes
ENSPKIG00000005627	prpf6	99	94.953	ENSIPUG00000004912	prpf6	97	94.953	Ictalurus_punctatus
ENSPKIG00000005627	prpf6	99	92.144	ENSSTOG00000002922	PRPF6	100	91.507	Ictidomys_tridecemlineatus
ENSPKIG00000005627	prpf6	99	94.793	ENSJJAG00000000836	Prpf6	100	94.368	Jaculus_jaculus
ENSPKIG00000005627	prpf6	99	94.362	ENSKMAG00000017800	prpf6	98	93.139	Kryptolebias_marmoratus
ENSPKIG00000005627	prpf6	99	94.255	ENSLBEG00000012582	prpf6	98	92.620	Labrus_bergylta
ENSPKIG00000005627	prpf6	100	96.013	ENSLOCG00000004827	prpf6	100	93.367	Lepisosteus_oculatus
ENSPKIG00000005627	prpf6	99	94.049	ENSLAFG00000005272	PRPF6	100	93.624	Loxodonta_africana
ENSPKIG00000005627	prpf6	99	93.624	ENSMFAG00000037542	PRPF6	100	93.199	Macaca_fascicularis
ENSPKIG00000005627	prpf6	99	87.473	ENSMMUG00000015558	PRPF6	98	94.974	Macaca_mulatta
ENSPKIG00000005627	prpf6	99	80.085	ENSMNEG00000045555	PRPF6	100	79.661	Macaca_nemestrina
ENSPKIG00000005627	prpf6	99	94.374	ENSMAMG00000010718	prpf6	98	93.154	Mastacembelus_armatus
ENSPKIG00000005627	prpf6	99	94.261	ENSMZEG00005015261	-	99	94.687	Maylandia_zebra
ENSPKIG00000005627	prpf6	92	94.779	ENSMZEG00005026539	prpf6	100	95.233	Maylandia_zebra
ENSPKIG00000005627	prpf6	96	94.547	ENSMGAG00000006634	PRPF6	100	94.547	Meleagris_gallopavo
ENSPKIG00000005627	prpf6	99	94.793	ENSMAUG00000013969	Prpf6	100	94.368	Mesocricetus_auratus
ENSPKIG00000005627	prpf6	86	93.674	ENSMICG00000017793	PRPF6	98	93.588	Microcebus_murinus
ENSPKIG00000005627	prpf6	99	94.687	ENSMOCG00000001701	Prpf6	100	94.261	Microtus_ochrogaster
ENSPKIG00000005627	prpf6	99	93.511	ENSMMOG00000020419	prpf6	100	93.936	Mola_mola
ENSPKIG00000005627	prpf6	97	95.314	ENSMODG00000017051	PRPF6	99	94.821	Monodelphis_domestica
ENSPKIG00000005627	prpf6	98	94.839	ENSMALG00000000089	prpf6	100	94.839	Monopterus_albus
ENSPKIG00000005627	prpf6	99	88.417	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSPKIG00000005627	prpf6	99	94.793	ENSMUSG00000002455	Prpf6	100	98.148	Mus_musculus
ENSPKIG00000005627	prpf6	99	94.793	MGP_PahariEiJ_G0026262	Prpf6	100	98.148	Mus_pahari
ENSPKIG00000005627	prpf6	99	94.793	MGP_SPRETEiJ_G0025741	Prpf6	100	98.148	Mus_spretus
ENSPKIG00000005627	prpf6	91	94.517	ENSMPUG00000008673	PRPF6	99	94.041	Mustela_putorius_furo
ENSPKIG00000005627	prpf6	99	94.899	ENSNGAG00000003365	Prpf6	100	94.474	Nannospalax_galili
ENSPKIG00000005627	prpf6	99	94.894	ENSNBRG00000015025	prpf6	98	93.659	Neolamprologus_brichardi
ENSPKIG00000005627	prpf6	99	93.624	ENSNLEG00000010208	PRPF6	100	93.199	Nomascus_leucogenys
ENSPKIG00000005627	prpf6	99	85.337	ENSMEUG00000009824	-	90	85.375	Notamacropus_eugenii
ENSPKIG00000005627	prpf6	99	88.842	ENSODEG00000004841	PRPF6	100	88.417	Octodon_degus
ENSPKIG00000005627	prpf6	99	94.787	ENSONIG00000017406	prpf6	98	93.555	Oreochromis_niloticus
ENSPKIG00000005627	prpf6	99	94.687	ENSOANG00000004920	PRPF6	100	94.261	Ornithorhynchus_anatinus
ENSPKIG00000005627	prpf6	98	92.704	ENSOCUG00000014151	PRPF6	100	92.275	Oryctolagus_cuniculus
ENSPKIG00000005627	prpf6	99	94.255	ENSORLG00000009592	prpf6	98	92.620	Oryzias_latipes
ENSPKIG00000005627	prpf6	99	94.362	ENSORLG00020001458	prpf6	98	92.723	Oryzias_latipes_hni
ENSPKIG00000005627	prpf6	99	94.362	ENSORLG00015018762	prpf6	98	92.723	Oryzias_latipes_hsok
ENSPKIG00000005627	prpf6	99	94.043	ENSOMEG00000012174	prpf6	98	92.827	Oryzias_melastigma
ENSPKIG00000005627	prpf6	99	87.686	ENSOGAG00000007573	PRPF6	100	87.261	Otolemur_garnettii
ENSPKIG00000005627	prpf6	99	93.354	ENSOARG00000008776	PRPF6	100	92.932	Ovis_aries
ENSPKIG00000005627	prpf6	99	93.730	ENSPPAG00000008686	PRPF6	100	93.305	Pan_paniscus
ENSPKIG00000005627	prpf6	99	94.261	ENSPPRG00000008497	PRPF6	100	93.836	Panthera_pardus
ENSPKIG00000005627	prpf6	96	94.220	ENSPTIG00000011184	PRPF6	97	93.784	Panthera_tigris_altaica
ENSPKIG00000005627	prpf6	99	93.730	ENSPTRG00000013765	PRPF6	100	93.305	Pan_troglodytes
ENSPKIG00000005627	prpf6	99	93.305	ENSPANG00000024135	PRPF6	100	92.880	Papio_anubis
ENSPKIG00000005627	prpf6	92	94.444	ENSPSIG00000007717	PRPF6	100	93.991	Pelodiscus_sinensis
ENSPKIG00000005627	prpf6	99	90.966	ENSPMGG00000008925	prpf6	98	91.173	Periophthalmus_magnuspinnatus
ENSPKIG00000005627	prpf6	99	94.793	ENSPEMG00000016036	Prpf6	100	94.368	Peromyscus_maniculatus_bairdii
ENSPKIG00000005627	prpf6	99	87.566	ENSPMAG00000006144	prpf6	99	87.566	Petromyzon_marinus
ENSPKIG00000005627	prpf6	99	94.793	ENSPCIG00000017909	PRPF6	100	94.368	Phascolarctos_cinereus
ENSPKIG00000005627	prpf6	99	94.787	ENSPFOG00000006431	prpf6	98	93.451	Poecilia_formosa
ENSPKIG00000005627	prpf6	99	94.468	ENSPLAG00000005974	prpf6	98	93.139	Poecilia_latipinna
ENSPKIG00000005627	prpf6	99	94.681	ENSPMEG00000009977	prpf6	96	95.106	Poecilia_mexicana
ENSPKIG00000005627	prpf6	99	94.574	ENSPREG00000017993	prpf6	99	89.105	Poecilia_reticulata
ENSPKIG00000005627	prpf6	99	93.199	ENSPPYG00000011256	PRPF6	100	92.774	Pongo_abelii
ENSPKIG00000005627	prpf6	94	96.405	ENSPCAG00000006536	PRPF6	88	96.405	Procavia_capensis
ENSPKIG00000005627	prpf6	99	94.049	ENSPCOG00000016881	PRPF6	100	93.624	Propithecus_coquereli
ENSPKIG00000005627	prpf6	99	88.735	ENSPVAG00000014316	PRPF6	100	88.310	Pteropus_vampyrus
ENSPKIG00000005627	prpf6	99	76.514	ENSPNYG00000001939	prpf6	98	93.098	Pundamilia_nyererei
ENSPKIG00000005627	prpf6	99	94.931	ENSPNAG00000015606	prpf6	98	94.277	Pygocentrus_nattereri
ENSPKIG00000005627	prpf6	99	94.687	ENSRNOG00000051498	Prpf6	100	94.261	Rattus_norvegicus
ENSPKIG00000005627	prpf6	99	93.624	ENSRBIG00000043613	PRPF6	100	93.199	Rhinopithecus_bieti
ENSPKIG00000005627	prpf6	99	90.582	ENSRROG00000040969	PRPF6	98	93.599	Rhinopithecus_roxellana
ENSPKIG00000005627	prpf6	90	90.973	ENSSBOG00000020632	PRPF6	93	88.754	Saimiri_boliviensis_boliviensis
ENSPKIG00000005627	prpf6	99	94.793	ENSSHAG00000016810	PRPF6	100	94.368	Sarcophilus_harrisii
ENSPKIG00000005627	prpf6	98	97.742	ENSSFOG00015020859	prpf6	100	97.742	Scleropages_formosus
ENSPKIG00000005627	prpf6	99	94.255	ENSSMAG00000008112	prpf6	98	92.427	Scophthalmus_maximus
ENSPKIG00000005627	prpf6	99	94.574	ENSSDUG00000016142	prpf6	98	93.451	Seriola_dumerili
ENSPKIG00000005627	prpf6	99	94.574	ENSSLDG00000025283	prpf6	100	91.702	Seriola_lalandi_dorsalis
ENSPKIG00000005627	prpf6	92	92.857	ENSSPUG00000018260	PRPF6	100	92.404	Sphenodon_punctatus
ENSPKIG00000005627	prpf6	99	94.574	ENSSPAG00000015850	prpf6	98	93.451	Stegastes_partitus
ENSPKIG00000005627	prpf6	99	93.776	ENSSSCG00000029119	PRPF6	100	93.424	Sus_scrofa
ENSPKIG00000005627	prpf6	99	94.492	ENSTGUG00000007221	PRPF6	100	94.492	Taeniopygia_guttata
ENSPKIG00000005627	prpf6	99	93.617	ENSTRUG00000002920	prpf6	98	92.412	Takifugu_rubripes
ENSPKIG00000005627	prpf6	99	87.434	ENSTNIG00000017873	prpf6	100	87.856	Tetraodon_nigroviridis
ENSPKIG00000005627	prpf6	87	97.222	ENSTBEG00000005348	PRPF6	85	95.000	Tupaia_belangeri
ENSPKIG00000005627	prpf6	99	93.943	ENSTTRG00000013068	PRPF6	100	93.518	Tursiops_truncatus
ENSPKIG00000005627	prpf6	97	92.617	ENSUMAG00000021631	PRPF6	98	92.391	Ursus_maritimus
ENSPKIG00000005627	prpf6	99	94.261	ENSVVUG00000014948	PRPF6	100	93.836	Vulpes_vulpes
ENSPKIG00000005627	prpf6	99	93.579	ENSXETG00000012054	prpf6	98	93.579	Xenopus_tropicalis
ENSPKIG00000005627	prpf6	99	94.681	ENSXCOG00000008082	prpf6	96	95.106	Xiphophorus_couchianus
ENSPKIG00000005627	prpf6	99	94.681	ENSXMAG00000015581	prpf6	96	95.106	Xiphophorus_maculatus