EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000005727 (Gene tree)
Gene ID: -
Gene Symbol: polr2a
Alias: -
Full Name: polymerase (RNA) II (DNA directed) polypeptide A
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 12848 bases
Position: chrPGUA01000276.1:223968-236815
Accession: ZDB-GENE-041008-78
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000021292	RNA_pol_Rpb1_5	PF04998.17	4.1e-60	1	2
ENSPKIP00000021292	RNA_pol_Rpb1_5	PF04998.17	4.1e-60	2	2
ENSPKIP00000021292	RNA_pol_Rpb1_4	PF05000.17	1.6e-37	1	1
ENSPKIP00000021292	RNA_pol_Rpb1_2	PF00623.20	2.5e-72	1	1
ENSPKIP00000021292	RNA_pol_Rpb1_3	PF04983.18	3.6e-48	1	1
ENSPKIP00000021292	RNA_pol_Rpb1_1	PF04997.12	4.8e-105	1	1
ENSPKIP00000021292	RNA_pol_Rpb1_7	PF04990.12	1.1e-52	1	1
ENSPKIP00000021292	RNA_pol_Rpb1_6	PF04992.14	9.6e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000001925	-	5555	-	ENSPKIP00000021292	1851 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000005727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000005727	polr2a	54	60.465	ENSPKIG00000008140	polr3a	76	60.465

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005727	polr2a	85	96.026	ENSAPOG00000006552	polr2a	81	96.026	Acanthochromis_polyacanthus
ENSPKIG00000005727	polr2a	85	82.000	ENSAMEG00000016265	-	77	92.528	Ailuropoda_melanoleuca
ENSPKIG00000005727	polr2a	85	95.656	ENSACIG00000015982	polr2a	77	95.656	Amphilophus_citrinellus
ENSPKIG00000005727	polr2a	85	96.118	ENSAOCG00000004255	polr2a	84	96.118	Amphiprion_ocellaris
ENSPKIG00000005727	polr2a	85	96.118	ENSAPEG00000012623	polr2a	81	96.118	Amphiprion_percula
ENSPKIG00000005727	polr2a	85	95.194	ENSATEG00000019644	polr2a	77	95.495	Anabas_testudineus
ENSPKIG00000005727	polr2a	85	84.663	ENSACAG00000014561	POLR2A	77	93.259	Anolis_carolinensis
ENSPKIG00000005727	polr2a	85	82.000	ENSANAG00000020093	-	77	92.793	Aotus_nancymaae
ENSPKIG00000005727	polr2a	85	95.287	ENSACLG00000006735	polr2a	77	95.287	Astatotilapia_calliptera
ENSPKIG00000005727	polr2a	85	95.749	ENSAMXG00000020046	polr2a	81	95.749	Astyanax_mexicanus
ENSPKIG00000005727	polr2a	85	82.000	ENSBTAG00000046765	POLR2A	77	92.793	Bos_taurus
ENSPKIG00000005727	polr2a	84	70.260	WBGene00000123	ama-1	81	70.167	Caenorhabditis_elegans
ENSPKIG00000005727	polr2a	82	84.363	ENSCAFG00000016532	POLR2A	85	92.793	Canis_familiaris
ENSPKIG00000005727	polr2a	85	83.622	ENSCAFG00020007929	-	77	92.793	Canis_lupus_dingo
ENSPKIG00000005727	polr2a	85	82.000	ENSCHIG00000027173	-	77	92.793	Capra_hircus
ENSPKIG00000005727	polr2a	85	92.620	ENSTSYG00000012803	-	81	92.620	Carlito_syrichta
ENSPKIG00000005727	polr2a	83	92.689	ENSCAPG00000001882	-	83	92.877	Cavia_aperea
ENSPKIG00000005727	polr2a	85	92.689	ENSCPOG00000014812	-	84	92.528	Cavia_porcellus
ENSPKIG00000005727	polr2a	85	82.000	ENSCCAG00000020938	-	77	92.793	Cebus_capucinus
ENSPKIG00000005727	polr2a	85	82.000	ENSCATG00000013680	-	77	92.793	Cercocebus_atys
ENSPKIG00000005727	polr2a	85	82.000	ENSCLAG00000012196	-	80	92.435	Chinchilla_lanigera
ENSPKIG00000005727	polr2a	79	92.620	ENSCSAG00000011644	-	75	92.620	Chlorocebus_sabaeus
ENSPKIG00000005727	polr2a	85	92.428	ENSCPBG00000012697	POLR2A	82	92.428	Chrysemys_picta_bellii
ENSPKIG00000005727	polr2a	84	70.775	ENSCING00000007884	-	93	69.546	Ciona_intestinalis
ENSPKIG00000005727	polr2a	84	76.859	ENSCSAVG00000008334	-	88	76.345	Ciona_savignyi
ENSPKIG00000005727	polr2a	85	82.000	ENSCANG00000010622	-	78	92.793	Colobus_angolensis_palliatus
ENSPKIG00000005727	polr2a	85	92.620	ENSCGRG00001003538	Polr2a	82	92.620	Cricetulus_griseus_chok1gshd
ENSPKIG00000005727	polr2a	82	80.868	ENSCGRG00000012105	Polr2a	82	92.620	Cricetulus_griseus_crigri
ENSPKIG00000005727	polr2a	85	86.103	ENSCSEG00000002635	polr2a	86	86.738	Cynoglossus_semilaevis
ENSPKIG00000005727	polr2a	85	95.471	ENSCVAG00000005156	polr2a	77	95.721	Cyprinodon_variegatus
ENSPKIG00000005727	polr2a	85	95.933	ENSDARG00000099966	polr2a	81	95.933	Danio_rerio
ENSPKIG00000005727	polr2a	85	82.000	ENSDNOG00000016482	-	77	92.793	Dasypus_novemcinctus
ENSPKIG00000005727	polr2a	85	82.000	ENSDORG00000008667	Polr2a	77	92.793	Dipodomys_ordii
ENSPKIG00000005727	polr2a	84	78.261	FBgn0003277	RpII215	79	75.326	Drosophila_melanogaster
ENSPKIG00000005727	polr2a	78	92.756	ENSETEG00000002540	-	74	92.756	Echinops_telfairi
ENSPKIG00000005727	polr2a	84	77.688	ENSEBUG00000013967	polr2a	77	85.939	Eptatretus_burgeri
ENSPKIG00000005727	polr2a	85	79.365	ENSEASG00005019114	-	78	92.793	Equus_asinus_asinus
ENSPKIG00000005727	polr2a	85	82.000	ENSECAG00000018485	POLR2A	77	92.793	Equus_caballus
ENSPKIG00000005727	polr2a	80	92.697	ENSEEUG00000001154	-	88	92.697	Erinaceus_europaeus
ENSPKIG00000005727	polr2a	85	95.291	ENSELUG00000014284	polr2a	79	95.291	Esox_lucius
ENSPKIG00000005727	polr2a	85	82.000	ENSFDAG00000008287	-	77	92.793	Fukomys_damarensis
ENSPKIG00000005727	polr2a	85	95.656	ENSFHEG00000001768	polr2a	79	95.656	Fundulus_heteroclitus
ENSPKIG00000005727	polr2a	84	94.917	ENSGMOG00000007725	polr2a	96	94.917	Gadus_morhua
ENSPKIG00000005727	polr2a	85	95.749	ENSGAFG00000005389	polr2a	96	95.749	Gambusia_affinis
ENSPKIG00000005727	polr2a	84	95.093	ENSGACG00000019366	polr2a	94	95.093	Gasterosteus_aculeatus
ENSPKIG00000005727	polr2a	85	82.000	ENSGGOG00000014800	-	96	91.507	Gorilla_gorilla
ENSPKIG00000005727	polr2a	85	95.287	ENSHBUG00000018937	polr2a	80	95.287	Haplochromis_burtoni
ENSPKIG00000005727	polr2a	85	82.000	ENSHGLG00000012381	POLR2A	77	92.793	Heterocephalus_glaber_female
ENSPKIG00000005727	polr2a	85	82.000	ENSHGLG00100014843	POLR2A	77	92.793	Heterocephalus_glaber_male
ENSPKIG00000005727	polr2a	85	80.702	ENSHCOG00000011874	polr2a	77	95.471	Hippocampus_comes
ENSPKIG00000005727	polr2a	85	80.702	ENSIPUG00000002613	Polr2a	77	95.753	Ictalurus_punctatus
ENSPKIG00000005727	polr2a	85	82.000	ENSSTOG00000001304	-	77	92.793	Ictidomys_tridecemlineatus
ENSPKIG00000005727	polr2a	85	82.000	ENSJJAG00000013049	Polr2a	79	92.804	Jaculus_jaculus
ENSPKIG00000005727	polr2a	81	91.382	ENSKMAG00000016343	polr2a	85	91.382	Kryptolebias_marmoratus
ENSPKIG00000005727	polr2a	85	95.287	ENSLBEG00000027652	polr2a	77	95.287	Labrus_bergylta
ENSPKIG00000005727	polr2a	83	88.308	ENSLACG00000012071	POLR2A	75	90.597	Latimeria_chalumnae
ENSPKIG00000005727	polr2a	85	96.303	ENSLOCG00000013863	polr2a	85	96.303	Lepisosteus_oculatus
ENSPKIG00000005727	polr2a	85	82.000	ENSLAFG00000008626	-	81	92.793	Loxodonta_africana
ENSPKIG00000005727	polr2a	53	91.760	ENSMFAG00000007042	-	99	91.760	Macaca_fascicularis
ENSPKIG00000005727	polr2a	85	82.000	ENSMMUG00000023620	-	78	92.793	Macaca_mulatta
ENSPKIG00000005727	polr2a	84	92.857	ENSMNEG00000040407	-	76	95.035	Macaca_nemestrina
ENSPKIG00000005727	polr2a	84	88.313	ENSMLEG00000030263	-	99	91.760	Mandrillus_leucophaeus
ENSPKIG00000005727	polr2a	85	95.471	ENSMAMG00000003351	polr2a	77	95.495	Mastacembelus_armatus
ENSPKIG00000005727	polr2a	85	95.287	ENSMZEG00005021429	polr2a	77	95.287	Maylandia_zebra
ENSPKIG00000005727	polr2a	53	93.082	ENSMAUG00000021055	-	99	93.082	Mesocricetus_auratus
ENSPKIG00000005727	polr2a	85	82.000	ENSMICG00000013372	-	98	92.253	Microcebus_murinus
ENSPKIG00000005727	polr2a	85	92.620	ENSMOCG00000018279	Polr2a	77	92.620	Microtus_ochrogaster
ENSPKIG00000005727	polr2a	85	80.556	ENSMMOG00000012515	polr2a	77	95.194	Mola_mola
ENSPKIG00000005727	polr2a	85	82.000	ENSMODG00000007009	-	77	93.018	Monodelphis_domestica
ENSPKIG00000005727	polr2a	85	95.568	ENSMALG00000008716	polr2a	81	95.568	Monopterus_albus
ENSPKIG00000005727	polr2a	85	80.000	MGP_CAROLIEiJ_G0016587	Polr2a	77	92.793	Mus_caroli
ENSPKIG00000005727	polr2a	85	80.000	ENSMUSG00000005198	Polr2a	77	92.793	Mus_musculus
ENSPKIG00000005727	polr2a	85	82.000	MGP_PahariEiJ_G0017718	Polr2a	77	92.620	Mus_pahari
ENSPKIG00000005727	polr2a	85	80.000	MGP_SPRETEiJ_G0017423	Polr2a	77	92.793	Mus_spretus
ENSPKIG00000005727	polr2a	85	82.000	ENSMPUG00000009648	-	77	92.804	Mustela_putorius_furo
ENSPKIG00000005727	polr2a	85	82.000	ENSMLUG00000009088	-	77	92.793	Myotis_lucifugus
ENSPKIG00000005727	polr2a	85	82.000	ENSNGAG00000002543	Polr2a	77	92.793	Nannospalax_galili
ENSPKIG00000005727	polr2a	85	95.656	ENSNBRG00000002005	polr2a	77	95.656	Neolamprologus_brichardi
ENSPKIG00000005727	polr2a	85	82.000	ENSNLEG00000009460	-	77	92.620	Nomascus_leucogenys
ENSPKIG00000005727	polr2a	77	94.143	ENSMEUG00000008611	-	84	94.143	Notamacropus_eugenii
ENSPKIG00000005727	polr2a	81	95.082	ENSOPRG00000015116	-	95	95.082	Ochotona_princeps
ENSPKIG00000005727	polr2a	85	92.435	ENSODEG00000017674	-	83	92.435	Octodon_degus
ENSPKIG00000005727	polr2a	85	95.749	ENSONIG00000009231	polr2a	77	95.749	Oreochromis_niloticus
ENSPKIG00000005727	polr2a	50	93.170	ENSOANG00000003303	-	98	93.170	Ornithorhynchus_anatinus
ENSPKIG00000005727	polr2a	85	87.730	ENSOCUG00000017929	-	96	84.736	Oryctolagus_cuniculus
ENSPKIG00000005727	polr2a	85	95.749	ENSORLG00000006431	polr2a	81	95.749	Oryzias_latipes
ENSPKIG00000005727	polr2a	85	95.749	ENSORLG00020010235	polr2a	81	95.749	Oryzias_latipes_hni
ENSPKIG00000005727	polr2a	85	95.841	ENSORLG00015007075	polr2a	81	95.841	Oryzias_latipes_hsok
ENSPKIG00000005727	polr2a	81	95.656	ENSOMEG00000010713	polr2a	96	95.656	Oryzias_melastigma
ENSPKIG00000005727	polr2a	85	82.000	ENSOGAG00000033608	-	77	92.712	Otolemur_garnettii
ENSPKIG00000005727	polr2a	84	84.302	ENSOARG00000013874	-	81	92.793	Ovis_aries
ENSPKIG00000005727	polr2a	82	86.724	ENSPPAG00000043734	-	78	92.620	Pan_paniscus
ENSPKIG00000005727	polr2a	85	82.000	ENSPTRG00000008691	POLR2A	77	92.620	Pan_troglodytes
ENSPKIG00000005727	polr2a	85	82.000	ENSPANG00000024099	-	77	92.793	Papio_anubis
ENSPKIG00000005727	polr2a	84	82.880	ENSPSIG00000014006	POLR2A	93	91.697	Pelodiscus_sinensis
ENSPKIG00000005727	polr2a	84	86.380	ENSPMGG00000019734	polr2a	92	98.324	Periophthalmus_magnuspinnatus
ENSPKIG00000005727	polr2a	85	82.000	ENSPEMG00000012521	Polr2a	77	92.793	Peromyscus_maniculatus_bairdii
ENSPKIG00000005727	polr2a	84	84.136	ENSPCIG00000028851	-	78	93.018	Phascolarctos_cinereus
ENSPKIG00000005727	polr2a	85	95.656	ENSPFOG00000007890	polr2a	80	95.721	Poecilia_formosa
ENSPKIG00000005727	polr2a	85	95.656	ENSPLAG00000007399	polr2a	80	95.721	Poecilia_latipinna
ENSPKIG00000005727	polr2a	85	95.656	ENSPMEG00000002071	polr2a	80	95.721	Poecilia_mexicana
ENSPKIG00000005727	polr2a	85	95.564	ENSPREG00000013122	polr2a	77	95.721	Poecilia_reticulata
ENSPKIG00000005727	polr2a	85	82.000	ENSPPYG00000007924	-	80	92.620	Pongo_abelii
ENSPKIG00000005727	polr2a	76	93.717	ENSPCAG00000006951	-	69	93.717	Procavia_capensis
ENSPKIG00000005727	polr2a	85	82.000	ENSPCOG00000025260	-	77	92.620	Propithecus_coquereli
ENSPKIG00000005727	polr2a	85	92.528	ENSPVAG00000005069	-	77	92.528	Pteropus_vampyrus
ENSPKIG00000005727	polr2a	85	95.379	ENSPNYG00000022340	polr2a	82	95.379	Pundamilia_nyererei
ENSPKIG00000005727	polr2a	85	96.118	ENSPNAG00000011237	polr2a	81	96.118	Pygocentrus_nattereri
ENSPKIG00000005727	polr2a	85	82.000	ENSRNOG00000028834	Polr2a	77	92.793	Rattus_norvegicus
ENSPKIG00000005727	polr2a	85	82.000	ENSRBIG00000002471	-	78	92.620	Rhinopithecus_bieti
ENSPKIG00000005727	polr2a	85	92.620	ENSRROG00000029583	-	78	92.793	Rhinopithecus_roxellana
ENSPKIG00000005727	polr2a	83	90.625	YDL140C	RPO21	89	51.804	Saccharomyces_cerevisiae
ENSPKIG00000005727	polr2a	85	82.000	ENSSBOG00000000808	-	77	92.793	Saimiri_boliviensis_boliviensis
ENSPKIG00000005727	polr2a	85	84.178	ENSSHAG00000002858	-	79	93.018	Sarcophilus_harrisii
ENSPKIG00000005727	polr2a	85	97.138	ENSSFOG00015023275	polr2a	81	97.138	Scleropages_formosus
ENSPKIG00000005727	polr2a	85	80.702	ENSSMAG00000009137	polr2a	78	95.194	Scophthalmus_maximus
ENSPKIG00000005727	polr2a	85	95.656	ENSSDUG00000020466	polr2a	77	95.656	Seriola_dumerili
ENSPKIG00000005727	polr2a	85	95.564	ENSSLDG00000020613	polr2a	77	95.564	Seriola_lalandi_dorsalis
ENSPKIG00000005727	polr2a	85	79.048	ENSSARG00000005875	-	98	76.134	Sorex_araneus
ENSPKIG00000005727	polr2a	85	96.026	ENSSPAG00000016741	polr2a	82	96.026	Stegastes_partitus
ENSPKIG00000005727	polr2a	85	92.251	ENSSSCG00000028278	-	77	92.251	Sus_scrofa
ENSPKIG00000005727	polr2a	83	90.851	ENSTRUG00000012320	polr2a	79	91.242	Takifugu_rubripes
ENSPKIG00000005727	polr2a	85	85.785	ENSTNIG00000010136	polr2a	98	86.289	Tetraodon_nigroviridis
ENSPKIG00000005727	polr2a	63	93.561	ENSTBEG00000013294	-	53	93.561	Tupaia_belangeri
ENSPKIG00000005727	polr2a	85	90.812	ENSTTRG00000014273	-	77	92.777	Tursiops_truncatus
ENSPKIG00000005727	polr2a	84	84.032	ENSUAMG00000014866	-	85	92.712	Ursus_americanus
ENSPKIG00000005727	polr2a	77	93.642	ENSUMAG00000015732	-	80	93.642	Ursus_maritimus
ENSPKIG00000005727	polr2a	85	82.000	ENSVVUG00000027878	-	78	92.793	Vulpes_vulpes
ENSPKIG00000005727	polr2a	83	83.960	ENSXETG00000012465	polr2a	77	92.750	Xenopus_tropicalis
ENSPKIG00000005727	polr2a	85	87.500	ENSXCOG00000001804	polr2a	83	95.564	Xiphophorus_couchianus
ENSPKIG00000005727	polr2a	85	95.564	ENSXMAG00000015687	polr2a	77	95.721	Xiphophorus_maculatus