EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000005906 (Gene tree)
Gene ID: 111845942
Gene Symbol: thoc1
Alias: -
Full Name: THO complex 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 6369 bases
Position: chrPGUA01000016.1:3346812-3353180
Accession: 111845942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000021561	efThoc1	PF11957.8	9e-141	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000002201	-	2210	XM_023815702	ENSPKIP00000021561	654 (aa)	XP_023671470	UPI000CD5FA2D

Gene Model

Click here to download ENSPKIG00000005906's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03013	RNA transport	KEGG
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005906's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005906	thoc1	99	73.242	ENSG00000079134	THOC1	99	79.044	Homo_sapiens
ENSPKIG00000005906	thoc1	99	73.242	ENSAMEG00000006645	THOC1	98	72.477	Ailuropoda_melanoleuca
ENSPKIG00000005906	thoc1	98	80.408	ENSACIG00000019392	thoc1	98	79.937	Amphilophus_citrinellus
ENSPKIG00000005906	thoc1	100	80.458	ENSAOCG00000008391	thoc1	100	79.695	Amphiprion_ocellaris
ENSPKIG00000005906	thoc1	100	85.191	ENSAPEG00000001093	thoc1	100	84.427	Amphiprion_percula
ENSPKIG00000005906	thoc1	99	85.627	ENSATEG00000004783	thoc1	99	84.862	Anabas_testudineus
ENSPKIG00000005906	thoc1	99	72.561	ENSAPLG00000016149	THOC1	98	71.799	Anas_platyrhynchos
ENSPKIG00000005906	thoc1	99	72.989	ENSACAG00000008307	THOC1	97	72.079	Anolis_carolinensis
ENSPKIG00000005906	thoc1	99	72.617	ENSANAG00000033200	THOC1	99	71.861	Aotus_nancymaae
ENSPKIG00000005906	thoc1	100	85.344	ENSACLG00000016836	thoc1	100	83.359	Astatotilapia_calliptera
ENSPKIG00000005906	thoc1	94	77.901	ENSAMXG00000014708	thoc1	98	76.789	Astyanax_mexicanus
ENSPKIG00000005906	thoc1	99	73.853	ENSBTAG00000019215	THOC1	99	73.089	Bos_taurus
ENSPKIG00000005906	thoc1	74	34.205	WBGene00020172	thoc-1	68	34.716	Caenorhabditis_elegans
ENSPKIG00000005906	thoc1	99	73.394	ENSCJAG00000020450	THOC1	99	72.630	Callithrix_jacchus
ENSPKIG00000005906	thoc1	99	73.394	ENSCAFG00000018324	THOC1	99	72.630	Canis_familiaris
ENSPKIG00000005906	thoc1	99	73.394	ENSCAFG00020017894	THOC1	99	72.630	Canis_lupus_dingo
ENSPKIG00000005906	thoc1	99	73.853	ENSCHIG00000015399	THOC1	99	73.089	Capra_hircus
ENSPKIG00000005906	thoc1	99	73.242	ENSTSYG00000010585	THOC1	98	72.477	Carlito_syrichta
ENSPKIG00000005906	thoc1	97	55.194	ENSCAPG00000016270	THOC1	97	54.419	Cavia_aperea
ENSPKIG00000005906	thoc1	99	72.477	ENSCPOG00000000959	THOC1	99	71.713	Cavia_porcellus
ENSPKIG00000005906	thoc1	99	73.394	ENSCCAG00000025766	THOC1	99	72.630	Cebus_capucinus
ENSPKIG00000005906	thoc1	99	71.407	ENSCATG00000028180	THOC1	96	78.324	Cercocebus_atys
ENSPKIG00000005906	thoc1	97	73.824	ENSCLAG00000009117	THOC1	99	73.041	Chinchilla_lanigera
ENSPKIG00000005906	thoc1	99	73.394	ENSCSAG00000017631	THOC1	99	72.630	Chlorocebus_sabaeus
ENSPKIG00000005906	thoc1	79	78.099	ENSCHOG00000010609	THOC1	78	75.519	Choloepus_hoffmanni
ENSPKIG00000005906	thoc1	99	74.198	ENSCPBG00000027558	THOC1	99	73.588	Chrysemys_picta_bellii
ENSPKIG00000005906	thoc1	74	48.178	ENSCING00000007663	-	99	47.368	Ciona_intestinalis
ENSPKIG00000005906	thoc1	94	47.799	ENSCSAVG00000010649	-	99	46.984	Ciona_savignyi
ENSPKIG00000005906	thoc1	99	73.242	ENSCANG00000034265	THOC1	96	78.947	Colobus_angolensis_palliatus
ENSPKIG00000005906	thoc1	99	72.783	ENSCGRG00001016464	Thoc1	98	72.018	Cricetulus_griseus_chok1gshd
ENSPKIG00000005906	thoc1	89	61.329	ENSCGRG00000003390	-	97	59.966	Cricetulus_griseus_crigri
ENSPKIG00000005906	thoc1	98	73.178	ENSCGRG00000010269	-	99	72.884	Cricetulus_griseus_crigri
ENSPKIG00000005906	thoc1	99	82.979	ENSCSEG00000012486	thoc1	99	84.244	Cynoglossus_semilaevis
ENSPKIG00000005906	thoc1	100	82.901	ENSCVAG00000020600	thoc1	100	82.137	Cyprinodon_variegatus
ENSPKIG00000005906	thoc1	99	83.002	ENSDARG00000088246	thoc1	99	82.389	Danio_rerio
ENSPKIG00000005906	thoc1	99	73.047	ENSDNOG00000019217	THOC1	99	72.435	Dasypus_novemcinctus
ENSPKIG00000005906	thoc1	98	69.302	ENSDORG00000008060	Thoc1	98	69.231	Dipodomys_ordii
ENSPKIG00000005906	thoc1	99	36.910	FBgn0037382	Hpr1	95	36.506	Drosophila_melanogaster
ENSPKIG00000005906	thoc1	91	57.047	ENSETEG00000004165	THOC1	99	56.975	Echinops_telfairi
ENSPKIG00000005906	thoc1	92	62.417	ENSEBUG00000005998	thoc1	98	62.748	Eptatretus_burgeri
ENSPKIG00000005906	thoc1	99	73.089	ENSEASG00005002549	THOC1	94	71.057	Equus_asinus_asinus
ENSPKIG00000005906	thoc1	99	73.547	ENSECAG00000009267	THOC1	88	72.783	Equus_caballus
ENSPKIG00000005906	thoc1	80	58.865	ENSEEUG00000012214	-	81	58.865	Erinaceus_europaeus
ENSPKIG00000005906	thoc1	100	86.930	ENSELUG00000023277	thoc1	100	86.170	Esox_lucius
ENSPKIG00000005906	thoc1	99	73.547	ENSFCAG00000022454	THOC1	86	72.783	Felis_catus
ENSPKIG00000005906	thoc1	97	73.717	ENSFALG00000006205	THOC1	99	73.053	Ficedula_albicollis
ENSPKIG00000005906	thoc1	98	73.375	ENSFDAG00000006842	THOC1	99	72.601	Fukomys_damarensis
ENSPKIG00000005906	thoc1	100	83.359	ENSFHEG00000008841	thoc1	100	82.595	Fundulus_heteroclitus
ENSPKIG00000005906	thoc1	99	82.848	ENSGMOG00000011486	thoc1	99	82.236	Gadus_morhua
ENSPKIG00000005906	thoc1	99	73.130	ENSGALG00000014915	THOC1	99	71.493	Gallus_gallus
ENSPKIG00000005906	thoc1	100	82.595	ENSGAFG00000021464	thoc1	100	81.832	Gambusia_affinis
ENSPKIG00000005906	thoc1	100	84.122	ENSGACG00000017361	thoc1	100	83.511	Gasterosteus_aculeatus
ENSPKIG00000005906	thoc1	99	74.504	ENSGAGG00000021230	-	97	73.893	Gopherus_agassizii
ENSPKIG00000005906	thoc1	99	73.394	ENSGGOG00000003013	THOC1	98	72.630	Gorilla_gorilla
ENSPKIG00000005906	thoc1	100	85.649	ENSHBUG00000009096	thoc1	100	83.664	Haplochromis_burtoni
ENSPKIG00000005906	thoc1	99	73.242	ENSHGLG00000003712	-	99	72.477	Heterocephalus_glaber_female
ENSPKIG00000005906	thoc1	70	69.231	ENSHGLG00000009264	-	98	72.678	Heterocephalus_glaber_female
ENSPKIG00000005906	thoc1	69	69.519	ENSHGLG00100002225	-	98	73.143	Heterocephalus_glaber_male
ENSPKIG00000005906	thoc1	99	73.089	ENSHGLG00100003570	THOC1	99	72.324	Heterocephalus_glaber_male
ENSPKIG00000005906	thoc1	91	80.755	ENSIPUG00000005306	thoc1	99	78.868	Ictalurus_punctatus
ENSPKIG00000005906	thoc1	99	73.394	ENSSTOG00000006484	THOC1	99	72.630	Ictidomys_tridecemlineatus
ENSPKIG00000005906	thoc1	52	75.291	ENSJJAG00000014893	-	96	75.291	Jaculus_jaculus
ENSPKIG00000005906	thoc1	100	81.804	ENSKMAG00000003904	thoc1	100	81.193	Kryptolebias_marmoratus
ENSPKIG00000005906	thoc1	100	84.427	ENSLBEG00000020372	thoc1	98	82.901	Labrus_bergylta
ENSPKIG00000005906	thoc1	99	74.312	ENSLACG00000014869	THOC1	99	73.394	Latimeria_chalumnae
ENSPKIG00000005906	thoc1	100	85.562	ENSLOCG00000002097	thoc1	99	84.650	Lepisosteus_oculatus
ENSPKIG00000005906	thoc1	99	73.242	ENSLAFG00000009585	THOC1	99	72.477	Loxodonta_africana
ENSPKIG00000005906	thoc1	99	73.394	ENSMFAG00000041520	THOC1	98	72.630	Macaca_fascicularis
ENSPKIG00000005906	thoc1	99	73.394	ENSMMUG00000004662	THOC1	99	72.630	Macaca_mulatta
ENSPKIG00000005906	thoc1	99	73.394	ENSMNEG00000040177	THOC1	98	72.630	Macaca_nemestrina
ENSPKIG00000005906	thoc1	99	73.394	ENSMLEG00000034201	THOC1	98	72.630	Mandrillus_leucophaeus
ENSPKIG00000005906	thoc1	96	84.076	ENSMAMG00000016747	thoc1	100	83.280	Mastacembelus_armatus
ENSPKIG00000005906	thoc1	100	85.344	ENSMZEG00005024609	thoc1	100	83.359	Maylandia_zebra
ENSPKIG00000005906	thoc1	97	73.323	ENSMGAG00000009811	THOC1	99	72.543	Meleagris_gallopavo
ENSPKIG00000005906	thoc1	99	72.477	ENSMAUG00000010272	Thoc1	98	71.713	Mesocricetus_auratus
ENSPKIG00000005906	thoc1	99	73.394	ENSMICG00000027200	THOC1	99	72.630	Microcebus_murinus
ENSPKIG00000005906	thoc1	99	71.560	ENSMOCG00000014536	-	85	70.948	Microtus_ochrogaster
ENSPKIG00000005906	thoc1	99	62.691	ENSMOCG00000014924	-	95	61.562	Microtus_ochrogaster
ENSPKIG00000005906	thoc1	93	84.818	ENSMMOG00000011772	thoc1	100	84.150	Mola_mola
ENSPKIG00000005906	thoc1	99	72.576	ENSMODG00000021482	THOC1	99	71.970	Monodelphis_domestica
ENSPKIG00000005906	thoc1	99	82.875	ENSMALG00000021872	thoc1	99	82.263	Monopterus_albus
ENSPKIG00000005906	thoc1	99	72.171	MGP_CAROLIEiJ_G0021989	Thoc1	99	71.407	Mus_caroli
ENSPKIG00000005906	thoc1	99	72.324	ENSMUSG00000024287	Thoc1	99	71.560	Mus_musculus
ENSPKIG00000005906	thoc1	99	72.324	MGP_PahariEiJ_G0018726	Thoc1	99	71.560	Mus_pahari
ENSPKIG00000005906	thoc1	99	72.324	MGP_SPRETEiJ_G0022905	Thoc1	99	71.560	Mus_spretus
ENSPKIG00000005906	thoc1	99	73.242	ENSMPUG00000005448	THOC1	99	72.477	Mustela_putorius_furo
ENSPKIG00000005906	thoc1	90	67.002	ENSMLUG00000027965	-	99	67.337	Myotis_lucifugus
ENSPKIG00000005906	thoc1	61	66.667	ENSMLUG00000024912	-	100	66.667	Myotis_lucifugus
ENSPKIG00000005906	thoc1	99	72.477	ENSMLUG00000004090	-	99	71.713	Myotis_lucifugus
ENSPKIG00000005906	thoc1	97	58.777	ENSNGAG00000008061	-	97	58.150	Nannospalax_galili
ENSPKIG00000005906	thoc1	99	73.394	ENSNGAG00000001401	-	99	72.630	Nannospalax_galili
ENSPKIG00000005906	thoc1	98	83.881	ENSNBRG00000005991	thoc1	97	81.847	Neolamprologus_brichardi
ENSPKIG00000005906	thoc1	99	73.394	ENSNLEG00000006835	THOC1	99	72.630	Nomascus_leucogenys
ENSPKIG00000005906	thoc1	80	77.538	ENSMEUG00000009756	THOC1	81	77.538	Notamacropus_eugenii
ENSPKIG00000005906	thoc1	99	59.021	ENSOPRG00000001108	THOC1	99	57.951	Ochotona_princeps
ENSPKIG00000005906	thoc1	99	68.300	ENSODEG00000006623	THOC1	99	67.534	Octodon_degus
ENSPKIG00000005906	thoc1	100	85.802	ENSONIG00000009440	thoc1	99	83.817	Oreochromis_niloticus
ENSPKIG00000005906	thoc1	99	73.394	ENSOCUG00000011601	THOC1	99	72.630	Oryctolagus_cuniculus
ENSPKIG00000005906	thoc1	100	83.206	ENSORLG00000017629	thoc1	100	82.595	Oryzias_latipes
ENSPKIG00000005906	thoc1	100	83.053	ENSORLG00020007567	thoc1	100	82.443	Oryzias_latipes_hni
ENSPKIG00000005906	thoc1	100	83.206	ENSORLG00015007356	thoc1	100	82.595	Oryzias_latipes_hsok
ENSPKIG00000005906	thoc1	100	81.957	ENSOMEG00000008200	thoc1	100	81.346	Oryzias_melastigma
ENSPKIG00000005906	thoc1	99	70.031	ENSOGAG00000000470	THOC1	98	69.266	Otolemur_garnettii
ENSPKIG00000005906	thoc1	98	74.264	ENSOARG00000009238	THOC1	97	73.488	Ovis_aries
ENSPKIG00000005906	thoc1	99	73.394	ENSPPAG00000031812	THOC1	98	72.630	Pan_paniscus
ENSPKIG00000005906	thoc1	99	72.783	ENSPPRG00000023794	THOC1	96	78.613	Panthera_pardus
ENSPKIG00000005906	thoc1	99	72.783	ENSPTIG00000007469	THOC1	96	78.613	Panthera_tigris_altaica
ENSPKIG00000005906	thoc1	99	72.466	ENSPTRG00000009816	THOC1	99	71.710	Pan_troglodytes
ENSPKIG00000005906	thoc1	99	72.492	ENSPANG00000008665	THOC1	99	71.733	Papio_anubis
ENSPKIG00000005906	thoc1	81	77.127	ENSPSIG00000007691	THOC1	97	76.371	Pelodiscus_sinensis
ENSPKIG00000005906	thoc1	94	80.676	ENSPMGG00000008279	thoc1	95	79.871	Periophthalmus_magnuspinnatus
ENSPKIG00000005906	thoc1	99	72.477	ENSPEMG00000021789	Thoc1	99	71.713	Peromyscus_maniculatus_bairdii
ENSPKIG00000005906	thoc1	74	73.577	ENSPCIG00000026942	THOC1	97	72.561	Phascolarctos_cinereus
ENSPKIG00000005906	thoc1	99	82.569	ENSPFOG00000011673	thoc1	99	80.734	Poecilia_formosa
ENSPKIG00000005906	thoc1	99	82.722	ENSPLAG00000019648	thoc1	100	81.832	Poecilia_latipinna
ENSPKIG00000005906	thoc1	99	82.722	ENSPMEG00000007083	thoc1	99	80.887	Poecilia_mexicana
ENSPKIG00000005906	thoc1	100	82.595	ENSPREG00000006719	thoc1	100	81.832	Poecilia_reticulata
ENSPKIG00000005906	thoc1	74	76.337	ENSPPYG00000009049	-	98	76.337	Pongo_abelii
ENSPKIG00000005906	thoc1	99	63.609	ENSPCAG00000005320	THOC1	88	73.913	Procavia_capensis
ENSPKIG00000005906	thoc1	99	72.477	ENSPCOG00000009234	THOC1	99	71.865	Propithecus_coquereli
ENSPKIG00000005906	thoc1	99	72.018	ENSPVAG00000004007	THOC1	99	71.407	Pteropus_vampyrus
ENSPKIG00000005906	thoc1	100	85.649	ENSPNYG00000019152	thoc1	100	83.664	Pundamilia_nyererei
ENSPKIG00000005906	thoc1	100	84.580	ENSPNAG00000023390	thoc1	100	83.511	Pygocentrus_nattereri
ENSPKIG00000005906	thoc1	81	60.357	ENSRNOG00000015332	Thoc1	95	58.268	Rattus_norvegicus
ENSPKIG00000005906	thoc1	99	72.617	ENSRBIG00000033738	THOC1	99	74.394	Rhinopithecus_bieti
ENSPKIG00000005906	thoc1	99	73.394	ENSRROG00000044988	THOC1	96	78.947	Rhinopithecus_roxellana
ENSPKIG00000005906	thoc1	99	73.089	ENSSBOG00000016556	THOC1	98	72.324	Saimiri_boliviensis_boliviensis
ENSPKIG00000005906	thoc1	99	73.547	ENSSHAG00000014829	THOC1	99	72.783	Sarcophilus_harrisii
ENSPKIG00000005906	thoc1	100	90.992	ENSSFOG00015021527	thoc1	100	90.382	Scleropages_formosus
ENSPKIG00000005906	thoc1	100	81.832	ENSSMAG00000018465	thoc1	99	79.847	Scophthalmus_maximus
ENSPKIG00000005906	thoc1	99	86.086	ENSSDUG00000016810	thoc1	100	85.191	Seriola_dumerili
ENSPKIG00000005906	thoc1	99	85.780	ENSSLDG00000015555	thoc1	100	84.885	Seriola_lalandi_dorsalis
ENSPKIG00000005906	thoc1	87	72.973	ENSSARG00000006910	THOC1	87	72.973	Sorex_araneus
ENSPKIG00000005906	thoc1	98	73.758	ENSSPUG00000007238	THOC1	98	72.657	Sphenodon_punctatus
ENSPKIG00000005906	thoc1	99	81.555	ENSSPAG00000018847	thoc1	99	80.670	Stegastes_partitus
ENSPKIG00000005906	thoc1	99	73.547	ENSSSCG00000025653	THOC1	93	72.783	Sus_scrofa
ENSPKIG00000005906	thoc1	99	73.435	ENSTGUG00000010204	THOC1	99	72.672	Taeniopygia_guttata
ENSPKIG00000005906	thoc1	99	84.709	ENSTRUG00000013518	thoc1	99	84.098	Takifugu_rubripes
ENSPKIG00000005906	thoc1	99	83.945	ENSTNIG00000008473	thoc1	99	83.333	Tetraodon_nigroviridis
ENSPKIG00000005906	thoc1	99	66.055	ENSTBEG00000016920	THOC1	99	65.291	Tupaia_belangeri
ENSPKIG00000005906	thoc1	99	67.125	ENSTTRG00000016664	THOC1	99	66.514	Tursiops_truncatus
ENSPKIG00000005906	thoc1	99	73.394	ENSUAMG00000002527	THOC1	99	72.630	Ursus_americanus
ENSPKIG00000005906	thoc1	99	73.394	ENSUMAG00000019693	THOC1	99	72.630	Ursus_maritimus
ENSPKIG00000005906	thoc1	67	69.008	ENSVPAG00000003726	-	66	69.008	Vicugna_pacos
ENSPKIG00000005906	thoc1	99	73.394	ENSVVUG00000004384	THOC1	99	72.630	Vulpes_vulpes
ENSPKIG00000005906	thoc1	99	71.212	ENSXETG00000003155	thoc1	97	68.892	Xenopus_tropicalis
ENSPKIG00000005906	thoc1	94	77.886	ENSXCOG00000016085	thoc1	89	76.585	Xiphophorus_couchianus
ENSPKIG00000005906	thoc1	100	82.443	ENSXMAG00000002353	thoc1	100	81.679	Xiphophorus_maculatus