EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000005966 (Gene tree)
Gene ID: 111854510
Gene Symbol: hdlbpb
Alias: -
Full Name: vigilin-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 21732 bases
Position: chrPGUA01000276.1:307178-328909
Accession: 111854510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	1	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	2	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	3	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	4	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	5	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	6	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	7	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	8	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	9	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	10	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	11	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	12	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	13	14
ENSPKIP00000021690	KH_1	PF00013.29	3.6e-188	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000002331	-	4028	-	ENSPKIP00000021690	1260 (aa)	XP_023688287	UPI000CD641EF

Gene Model

Click here to download ENSPKIG00000005966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005966's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000005966	hdlbpb	100	70.912	ENSPKIG00000002392	hdlbpa	100	70.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005966	hdlbpb	100	89.196	ENSAPOG00000006904	hdlbpb	100	89.196	Acanthochromis_polyacanthus
ENSPKIG00000005966	hdlbpb	100	85.083	ENSACIG00000016154	hdlbpb	100	85.241	Amphilophus_citrinellus
ENSPKIG00000005966	hdlbpb	100	89.511	ENSAOCG00000004083	hdlbpb	100	89.511	Amphiprion_ocellaris
ENSPKIG00000005966	hdlbpb	100	89.432	ENSAPEG00000012270	hdlbpb	100	89.432	Amphiprion_percula
ENSPKIG00000005966	hdlbpb	100	88.959	ENSATEG00000019877	hdlbpb	100	88.880	Anabas_testudineus
ENSPKIG00000005966	hdlbpb	100	83.254	ENSACAG00000003606	-	100	83.254	Anolis_carolinensis
ENSPKIG00000005966	hdlbpb	100	88.801	ENSACLG00000006618	hdlbpb	100	88.801	Astatotilapia_calliptera
ENSPKIG00000005966	hdlbpb	100	79.226	ENSAMXG00000019946	hdlbpb	100	79.068	Astyanax_mexicanus
ENSPKIG00000005966	hdlbpb	100	87.924	ENSCSEG00000000955	hdlbpb	100	87.952	Cynoglossus_semilaevis
ENSPKIG00000005966	hdlbpb	100	88.486	ENSCVAG00000005345	hdlbpb	100	88.486	Cyprinodon_variegatus
ENSPKIG00000005966	hdlbpb	99	86.609	ENSDARG00000061864	hdlbpb	99	86.529	Danio_rerio
ENSPKIG00000005966	hdlbpb	93	70.282	ENSEBUG00000005304	hdlbpb	96	70.282	Eptatretus_burgeri
ENSPKIG00000005966	hdlbpb	100	77.577	ENSELUG00000019925	hdlbpb	100	77.419	Esox_lucius
ENSPKIG00000005966	hdlbpb	87	33.726	ENSFHEG00000001701	hdlbpb	100	83.662	Fundulus_heteroclitus
ENSPKIG00000005966	hdlbpb	96	85.103	ENSGMOG00000004522	hdlbpb	78	85.103	Gadus_morhua
ENSPKIG00000005966	hdlbpb	100	88.722	ENSGAFG00000005278	hdlbpb	100	88.644	Gambusia_affinis
ENSPKIG00000005966	hdlbpb	99	86.335	ENSGACG00000019361	hdlbpb	100	86.256	Gasterosteus_aculeatus
ENSPKIG00000005966	hdlbpb	100	88.644	ENSHBUG00000018434	hdlbpb	100	88.644	Haplochromis_burtoni
ENSPKIG00000005966	hdlbpb	100	86.335	ENSIPUG00000003291	HDLBP	100	86.376	Ictalurus_punctatus
ENSPKIG00000005966	hdlbpb	100	88.328	ENSKMAG00000016562	hdlbpb	100	88.328	Kryptolebias_marmoratus
ENSPKIG00000005966	hdlbpb	100	88.486	ENSLBEG00000027855	hdlbpb	100	88.407	Labrus_bergylta
ENSPKIG00000005966	hdlbpb	100	70.815	ENSLACG00000007661	hdlbpb	100	70.815	Latimeria_chalumnae
ENSPKIG00000005966	hdlbpb	100	85.091	ENSLOCG00000013909	hdlbpb	100	85.091	Lepisosteus_oculatus
ENSPKIG00000005966	hdlbpb	100	88.801	ENSMAMG00000003035	hdlbpb	100	88.722	Mastacembelus_armatus
ENSPKIG00000005966	hdlbpb	100	88.801	ENSMZEG00005021465	hdlbpb	100	88.801	Maylandia_zebra
ENSPKIG00000005966	hdlbpb	100	88.626	ENSMMOG00000012525	hdlbpb	100	88.547	Mola_mola
ENSPKIG00000005966	hdlbpb	100	86.987	ENSMALG00000008938	hdlbpb	100	86.987	Monopterus_albus
ENSPKIG00000005966	hdlbpb	100	88.880	ENSNBRG00000002236	hdlbpb	100	88.880	Neolamprologus_brichardi
ENSPKIG00000005966	hdlbpb	100	88.486	ENSONIG00000009211	hdlbpb	100	88.486	Oreochromis_niloticus
ENSPKIG00000005966	hdlbpb	100	87.372	ENSORLG00000006581	hdlbpb	100	87.214	Oryzias_latipes
ENSPKIG00000005966	hdlbpb	100	87.451	ENSORLG00020010012	hdlbpb	100	87.293	Oryzias_latipes_hni
ENSPKIG00000005966	hdlbpb	100	87.530	ENSORLG00015006863	hdlbpb	100	87.451	Oryzias_latipes_hsok
ENSPKIG00000005966	hdlbpb	100	87.766	ENSOMEG00000011131	hdlbpb	100	87.609	Oryzias_melastigma
ENSPKIG00000005966	hdlbpb	85	90.000	ENSPMGG00000019853	hdlbpb	99	90.000	Periophthalmus_magnuspinnatus
ENSPKIG00000005966	hdlbpb	93	67.905	ENSPMAG00000000249	-	99	68.506	Petromyzon_marinus
ENSPKIG00000005966	hdlbpb	94	74.753	ENSPMAG00000002131	hdlbpb	100	74.753	Petromyzon_marinus
ENSPKIG00000005966	hdlbpb	100	87.676	ENSPFOG00000008755	hdlbpb	100	87.598	Poecilia_formosa
ENSPKIG00000005966	hdlbpb	100	88.722	ENSPLAG00000007055	hdlbpb	100	88.644	Poecilia_latipinna
ENSPKIG00000005966	hdlbpb	100	88.565	ENSPMEG00000001952	hdlbpb	100	88.486	Poecilia_mexicana
ENSPKIG00000005966	hdlbpb	100	88.959	ENSPREG00000012848	hdlbpb	100	88.880	Poecilia_reticulata
ENSPKIG00000005966	hdlbpb	100	88.792	ENSPNYG00000022467	hdlbpb	100	88.792	Pundamilia_nyererei
ENSPKIG00000005966	hdlbpb	100	89.232	ENSPNAG00000011104	hdlbpb	100	89.074	Pygocentrus_nattereri
ENSPKIG00000005966	hdlbpb	100	93.254	ENSSFOG00015023199	hdlbpb	100	93.254	Scleropages_formosus
ENSPKIG00000005966	hdlbpb	100	88.565	ENSSMAG00000008790	hdlbpb	100	88.565	Scophthalmus_maximus
ENSPKIG00000005966	hdlbpb	100	88.871	ENSSDUG00000020694	hdlbpb	100	88.871	Seriola_dumerili
ENSPKIG00000005966	hdlbpb	100	88.713	ENSSLDG00000020807	hdlbpb	100	88.713	Seriola_lalandi_dorsalis
ENSPKIG00000005966	hdlbpb	100	84.048	ENSSPUG00000018688	-	100	84.048	Sphenodon_punctatus
ENSPKIG00000005966	hdlbpb	100	89.117	ENSSPAG00000016969	hdlbpb	100	89.117	Stegastes_partitus
ENSPKIG00000005966	hdlbpb	98	85.432	ENSTRUG00000012888	hdlbpb	99	85.273	Takifugu_rubripes
ENSPKIG00000005966	hdlbpb	99	86.296	ENSTNIG00000002555	hdlbpb	100	86.218	Tetraodon_nigroviridis
ENSPKIG00000005966	hdlbpb	100	79.331	ENSXCOG00000001797	hdlbpb	100	79.331	Xiphophorus_couchianus
ENSPKIG00000005966	hdlbpb	100	88.486	ENSXMAG00000015633	hdlbpb	100	88.407	Xiphophorus_maculatus