EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000005979 (Gene tree)
Gene ID: 111840093
Gene Symbol: swt1
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 25531 bases
Position: chrPGUA01000076.1:631829-657359
Accession: 111840093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000021665	PIN_4	PF13638.6	1.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000002306	-	4126	XM_023804535	ENSPKIP00000021665	937 (aa)	XP_023660302	UPI000CD5D5ED

Gene Model

Click here to download ENSPKIG00000005979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000005979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000005979	swt1	59	37.522	ENSG00000116668	SWT1	61	37.522	Homo_sapiens
ENSPKIG00000005979	swt1	60	46.102	ENSAPOG00000014897	-	60	46.102	Acanthochromis_polyacanthus
ENSPKIG00000005979	swt1	59	37.197	ENSAMEG00000013585	SWT1	62	37.197	Ailuropoda_melanoleuca
ENSPKIG00000005979	swt1	59	47.432	ENSAOCG00000013932	swt1	60	47.432	Amphiprion_ocellaris
ENSPKIG00000005979	swt1	59	47.260	ENSAPEG00000009613	-	60	47.260	Amphiprion_percula
ENSPKIG00000005979	swt1	57	50.709	ENSATEG00000018946	swt1	57	50.709	Anabas_testudineus
ENSPKIG00000005979	swt1	60	36.824	ENSAPLG00000008607	SWT1	77	36.824	Anas_platyrhynchos
ENSPKIG00000005979	swt1	58	36.702	ENSACAG00000002276	SWT1	64	36.702	Anolis_carolinensis
ENSPKIG00000005979	swt1	60	36.207	ENSANAG00000027068	SWT1	62	36.207	Aotus_nancymaae
ENSPKIG00000005979	swt1	55	48.346	ENSACLG00000009742	swt1	66	48.799	Astatotilapia_calliptera
ENSPKIG00000005979	swt1	58	51.878	ENSAMXG00000010971	swt1	57	51.878	Astyanax_mexicanus
ENSPKIG00000005979	swt1	60	36.049	ENSCJAG00000005544	SWT1	62	36.049	Callithrix_jacchus
ENSPKIG00000005979	swt1	59	36.189	ENSCAFG00000013543	SWT1	61	36.920	Canis_familiaris
ENSPKIG00000005979	swt1	59	36.189	ENSCAFG00020015648	SWT1	66	36.189	Canis_lupus_dingo
ENSPKIG00000005979	swt1	59	36.731	ENSCHIG00000023511	SWT1	95	36.395	Capra_hircus
ENSPKIG00000005979	swt1	59	36.442	ENSTSYG00000010470	SWT1	62	36.442	Carlito_syrichta
ENSPKIG00000005979	swt1	53	35.674	ENSCPOG00000014251	SWT1	63	35.674	Cavia_porcellus
ENSPKIG00000005979	swt1	60	37.262	ENSCCAG00000033926	SWT1	62	37.435	Cebus_capucinus
ENSPKIG00000005979	swt1	61	36.256	ENSCATG00000042210	SWT1	95	37.133	Cercocebus_atys
ENSPKIG00000005979	swt1	59	36.411	ENSCLAG00000013959	SWT1	63	36.411	Chinchilla_lanigera
ENSPKIG00000005979	swt1	59	36.960	ENSCSAG00000012895	SWT1	62	36.960	Chlorocebus_sabaeus
ENSPKIG00000005979	swt1	59	37.913	ENSCPBG00000015691	SWT1	62	37.913	Chrysemys_picta_bellii
ENSPKIG00000005979	swt1	59	37.217	ENSCANG00000032207	SWT1	95	37.217	Colobus_angolensis_palliatus
ENSPKIG00000005979	swt1	63	35.188	ENSCGRG00001022955	Swt1	69	35.188	Cricetulus_griseus_chok1gshd
ENSPKIG00000005979	swt1	63	35.188	ENSCGRG00000010224	Swt1	67	35.188	Cricetulus_griseus_crigri
ENSPKIG00000005979	swt1	61	44.262	ENSCSEG00000017352	swt1	78	44.590	Cynoglossus_semilaevis
ENSPKIG00000005979	swt1	59	50.175	ENSDARG00000094010	swt1	58	50.175	Danio_rerio
ENSPKIG00000005979	swt1	51	36.694	ENSDNOG00000005254	SWT1	59	36.694	Dasypus_novemcinctus
ENSPKIG00000005979	swt1	59	35.826	ENSDORG00000010531	Swt1	67	35.951	Dipodomys_ordii
ENSPKIG00000005979	swt1	59	35.406	ENSEASG00005005530	SWT1	66	35.406	Equus_asinus_asinus
ENSPKIG00000005979	swt1	59	35.253	ENSECAG00000012085	SWT1	65	35.253	Equus_caballus
ENSPKIG00000005979	swt1	79	44.074	ENSELUG00000020565	swt1	77	44.691	Esox_lucius
ENSPKIG00000005979	swt1	59	36.934	ENSFCAG00000011286	SWT1	62	36.934	Felis_catus
ENSPKIG00000005979	swt1	64	37.821	ENSFALG00000003206	SWT1	67	37.821	Ficedula_albicollis
ENSPKIG00000005979	swt1	60	36.163	ENSFDAG00000007569	SWT1	64	36.163	Fukomys_damarensis
ENSPKIG00000005979	swt1	58	37.889	ENSGALG00000034230	SWT1	64	38.179	Gallus_gallus
ENSPKIG00000005979	swt1	59	44.942	ENSGAFG00000007803	-	60	44.942	Gambusia_affinis
ENSPKIG00000005979	swt1	61	37.153	ENSGAGG00000025050	SWT1	97	37.544	Gopherus_agassizii
ENSPKIG00000005979	swt1	57	35.753	ENSGGOG00000041167	-	97	35.753	Gorilla_gorilla
ENSPKIG00000005979	swt1	58	48.601	ENSHBUG00000006188	swt1	67	49.033	Haplochromis_burtoni
ENSPKIG00000005979	swt1	58	37.102	ENSHGLG00000006542	SWT1	65	37.102	Heterocephalus_glaber_female
ENSPKIG00000005979	swt1	58	37.102	ENSHGLG00100014408	SWT1	63	37.102	Heterocephalus_glaber_male
ENSPKIG00000005979	swt1	58	49.642	ENSIPUG00000009113	-	80	42.033	Ictalurus_punctatus
ENSPKIG00000005979	swt1	59	35.924	ENSSTOG00000010356	SWT1	63	35.924	Ictidomys_tridecemlineatus
ENSPKIG00000005979	swt1	61	34.783	ENSJJAG00000015927	Swt1	67	34.783	Jaculus_jaculus
ENSPKIG00000005979	swt1	57	47.213	ENSKMAG00000012533	swt1	58	47.213	Kryptolebias_marmoratus
ENSPKIG00000005979	swt1	57	47.772	ENSLBEG00000020663	-	57	47.857	Labrus_bergylta
ENSPKIG00000005979	swt1	60	39.500	ENSLACG00000009194	SWT1	85	39.500	Latimeria_chalumnae
ENSPKIG00000005979	swt1	56	49.084	ENSLOCG00000001749	swt1	97	48.308	Lepisosteus_oculatus
ENSPKIG00000005979	swt1	59	34.957	ENSLAFG00000004346	-	96	34.957	Loxodonta_africana
ENSPKIG00000005979	swt1	59	36.870	ENSMFAG00000031793	SWT1	96	36.870	Macaca_fascicularis
ENSPKIG00000005979	swt1	58	35.879	ENSMMUG00000013882	SWT1	95	35.879	Macaca_mulatta
ENSPKIG00000005979	swt1	61	35.993	ENSMNEG00000035502	SWT1	96	36.870	Macaca_nemestrina
ENSPKIG00000005979	swt1	59	36.998	ENSMLEG00000038692	SWT1	95	36.522	Mandrillus_leucophaeus
ENSPKIG00000005979	swt1	58	48.601	ENSMZEG00005018489	swt1	67	49.033	Maylandia_zebra
ENSPKIG00000005979	swt1	58	38.062	ENSMGAG00000000973	SWT1	95	38.062	Meleagris_gallopavo
ENSPKIG00000005979	swt1	57	34.186	ENSMAUG00000007996	Swt1	60	34.186	Mesocricetus_auratus
ENSPKIG00000005979	swt1	62	35.058	ENSMICG00000014975	SWT1	65	35.058	Microcebus_murinus
ENSPKIG00000005979	swt1	63	36.170	ENSMOCG00000009776	Swt1	66	36.230	Microtus_ochrogaster
ENSPKIG00000005979	swt1	66	33.991	ENSMODG00000007472	SWT1	69	33.991	Monodelphis_domestica
ENSPKIG00000005979	swt1	57	50.000	ENSMALG00000019308	swt1	57	49.818	Monopterus_albus
ENSPKIG00000005979	swt1	58	36.475	MGP_CAROLIEiJ_G0014692	Swt1	62	48.077	Mus_caroli
ENSPKIG00000005979	swt1	58	36.000	ENSMUSG00000052748	Swt1	66	45.238	Mus_musculus
ENSPKIG00000005979	swt1	61	35.548	MGP_PahariEiJ_G0027928	Swt1	69	45.087	Mus_pahari
ENSPKIG00000005979	swt1	58	36.300	MGP_SPRETEiJ_G0015499	Swt1	66	45.833	Mus_spretus
ENSPKIG00000005979	swt1	59	37.063	ENSMPUG00000011913	SWT1	62	37.063	Mustela_putorius_furo
ENSPKIG00000005979	swt1	62	34.667	ENSMLUG00000001142	SWT1	65	34.667	Myotis_lucifugus
ENSPKIG00000005979	swt1	58	35.702	ENSNGAG00000021080	Swt1	61	35.524	Nannospalax_galili
ENSPKIG00000005979	swt1	59	37.128	ENSNLEG00000018031	SWT1	61	37.128	Nomascus_leucogenys
ENSPKIG00000005979	swt1	58	45.882	ENSONIG00000009994	swt1	96	46.455	Oreochromis_niloticus
ENSPKIG00000005979	swt1	58	35.253	ENSOANG00000001013	-	71	35.253	Ornithorhynchus_anatinus
ENSPKIG00000005979	swt1	64	36.306	ENSOCUG00000004901	SWT1	69	36.306	Oryctolagus_cuniculus
ENSPKIG00000005979	swt1	58	46.392	ENSORLG00000009682	swt1	60	46.564	Oryzias_latipes
ENSPKIG00000005979	swt1	58	47.251	ENSORLG00020011654	swt1	60	47.079	Oryzias_latipes_hni
ENSPKIG00000005979	swt1	58	46.735	ENSORLG00015007734	swt1	60	46.907	Oryzias_latipes_hsok
ENSPKIG00000005979	swt1	62	46.103	ENSOMEG00000006607	swt1	60	46.399	Oryzias_melastigma
ENSPKIG00000005979	swt1	59	36.953	ENSOGAG00000016195	SWT1	62	36.953	Otolemur_garnettii
ENSPKIG00000005979	swt1	59	36.731	ENSOARG00000004156	SWT1	61	36.731	Ovis_aries
ENSPKIG00000005979	swt1	59	37.522	ENSPPAG00000021400	SWT1	61	37.522	Pan_paniscus
ENSPKIG00000005979	swt1	59	36.934	ENSPPRG00000023754	SWT1	62	36.934	Panthera_pardus
ENSPKIG00000005979	swt1	59	36.934	ENSPTIG00000021889	SWT1	62	36.934	Panthera_tigris_altaica
ENSPKIG00000005979	swt1	59	37.522	ENSPTRG00000001777	SWT1	61	37.522	Pan_troglodytes
ENSPKIG00000005979	swt1	59	36.788	ENSPANG00000005099	SWT1	95	36.788	Papio_anubis
ENSPKIG00000005979	swt1	60	38.038	ENSPSIG00000008961	SWT1	62	38.235	Pelodiscus_sinensis
ENSPKIG00000005979	swt1	63	35.484	ENSPEMG00000008208	Swt1	66	35.484	Peromyscus_maniculatus_bairdii
ENSPKIG00000005979	swt1	63	34.671	ENSPCIG00000002443	SWT1	70	33.632	Phascolarctos_cinereus
ENSPKIG00000005979	swt1	58	45.095	ENSPFOG00000010988	-	70	43.167	Poecilia_formosa
ENSPKIG00000005979	swt1	58	45.267	ENSPLAG00000022908	-	59	45.267	Poecilia_latipinna
ENSPKIG00000005979	swt1	58	45.095	ENSPMEG00000006943	-	59	45.095	Poecilia_mexicana
ENSPKIG00000005979	swt1	59	37.522	ENSPPYG00000000415	SWT1	61	37.522	Pongo_abelii
ENSPKIG00000005979	swt1	59	33.969	ENSPVAG00000005968	SWT1	62	33.969	Pteropus_vampyrus
ENSPKIG00000005979	swt1	58	48.601	ENSPNYG00000012934	swt1	67	49.033	Pundamilia_nyererei
ENSPKIG00000005979	swt1	58	52.065	ENSPNAG00000017795	swt1	58	52.065	Pygocentrus_nattereri
ENSPKIG00000005979	swt1	59	36.770	ENSRNOG00000032258	Swt1	64	36.724	Rattus_norvegicus
ENSPKIG00000005979	swt1	59	35.614	ENSRBIG00000040630	SWT1	95	35.614	Rhinopithecus_bieti
ENSPKIG00000005979	swt1	61	36.177	ENSSBOG00000028825	SWT1	65	36.177	Saimiri_boliviensis_boliviensis
ENSPKIG00000005979	swt1	63	34.477	ENSSHAG00000009241	SWT1	68	34.472	Sarcophilus_harrisii
ENSPKIG00000005979	swt1	89	47.072	ENSSFOG00015004895	swt1	97	46.195	Scleropages_formosus
ENSPKIG00000005979	swt1	59	47.878	ENSSDUG00000012345	swt1	58	48.511	Seriola_dumerili
ENSPKIG00000005979	swt1	59	47.538	ENSSLDG00000003821	swt1	58	48.161	Seriola_lalandi_dorsalis
ENSPKIG00000005979	swt1	60	38.276	ENSSPUG00000003899	SWT1	62	38.276	Sphenodon_punctatus
ENSPKIG00000005979	swt1	64	45.024	ENSSPAG00000001030	swt1	65	45.024	Stegastes_partitus
ENSPKIG00000005979	swt1	59	35.079	ENSSSCG00000015569	SWT1	64	35.540	Sus_scrofa
ENSPKIG00000005979	swt1	58	38.475	ENSTGUG00000003718	-	99	38.475	Taeniopygia_guttata
ENSPKIG00000005979	swt1	58	48.387	ENSTRUG00000006420	swt1	61	48.387	Takifugu_rubripes
ENSPKIG00000005979	swt1	59	34.904	ENSTTRG00000005914	SWT1	62	34.904	Tursiops_truncatus
ENSPKIG00000005979	swt1	59	37.414	ENSUAMG00000020937	SWT1	67	37.414	Ursus_americanus
ENSPKIG00000005979	swt1	59	37.414	ENSUMAG00000021918	SWT1	62	37.414	Ursus_maritimus
ENSPKIG00000005979	swt1	59	36.888	ENSVVUG00000009182	SWT1	64	36.888	Vulpes_vulpes
ENSPKIG00000005979	swt1	59	46.374	ENSXMAG00000023472	-	60	46.374	Xiphophorus_maculatus